AMCG00006386


Basic Information

Item Value
gene id AMCG00006386
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3653239 ~ 3668931 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006386
ATGGTTTCCTCCGGAGCTCTCGccggtgctgtgctgtgtctgttcCTGATCGGCAACTTCACAGACGTGTCCTCAGCTCCCGTCTCAGTGTCCGTGAGATTTGGGGAGTCTGTGACTCTGCCCTGTGATGGATCAGCCTACAGAGAGACTCCTGAACAGCAGCTGTACATTAAATGGGAGACGATAACCCATCCAGTCTATGAGTTTGTCTATGGAAAGTCCTATCCCAGCTCTGGGTTTGAGAACAGGACTGAGGTTCCCCTGGAGAGGATCAGACAGGGGGACTTCTCTCTGACCCTCCAGCACGCCTCCTTCTCGGACGCAGGGATCTTTGACTGCTTGTATGAGTGGAGAGGGAACCGGGGAGAATTCCTTGGCAATGTGGAGCTCTCTGTGCAGGGCCGTGAGGAGAGCAGCTCTGTCTCCTATGGGCAGCCCCTGAGCCTCCGTCTGTACAGCAGGGCAGCTGTGACAGTGCGGTTTAACCCTGCGGGCACTGGAGCCTCTCTCCCAGTGTGTGCTGTAGAGGGCGGCACCGTGACCCCTGACCCTGCCTATGGGCCCCGAGTCTCAGGGCAGGAGCAGGAGGTCACACTGTCAGCACTGACCTTCACTGACCAGGGCACCTACACAGTGCTGGACTCCCAGAGCAGGACCATCAGCACTGTGGCCGTCACTGTGACAGCTCAGAGAGACGCCCTCACCCTGCCGTCTGGAGCCTCGCTGTCTCTCCCGCTCTACTCTCCTGGGCCGGTGGAGGTGCTGTTCGCTGCTGCAGGAGAGGGAgcctgtgtctcagtgtgcaCTGTGGAGTGGGGTGCAGCGAGCCGCCCTGGCCCCGGGTACGAGCACAGAGTGTCAGTGCAGAGCGGCTCTCTGACCCTGCGCTCACTTACAGCAGCTGACCAGGGAAACTACACAGTGAGGGAGTCTGGGAACAACCGCACCATCAGCaccgtctctgtgtctgtctccctcACATCTGAAGACTCGGCTCCTCCTCTCTGGGTCTGgagtgtttctgtctctgtgctggGGGTGTTACTGTGCCTCGGGGTCTCTGTGTATGTCTGGCGCAGCCTGAGGCTGAAGAGGAGACCACAAAAACCGAGGACTACTCTTGATTCGCTACTGCCCGTAACCAACCCTCGCTTCTCTGCCACACGGACCTCCACCCCTGATTCCTTCAGTCTGAGGGTGGAGAACATCAGCGACACGGACCTGGCGCTGTACTACTGCgcacagagaggagagatgcGGTTTGGAAATGCGACCAGACTCGTCTATGCAGATCAGCATGAACCGCCCACCTCACACTCTCCcatttcttctccctctccctcttcatcTCCAACACCCCTCCCGtcctgctcctcctctccctctccccctgccCCCTGTGTGCTGAACTGGGCACtgctgggctgtgtgtctgcaggctgCCTCCTGCTCTCCGGCTGTCTCTGCTGCCTCTGGAGCAGGAGAGTTGTGTTTTATCCAGAATTGTGGTGTTCAGTGTGTCGGGGCGCAGAGGAGTCCAGGGCAGAGCAGGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006386 True 1557 mRNA 0.59 9 3653239 3668931

Neighbor

gene id symbol gene type direction distance location
AMCG00006384 NA coding upstream 21118 3623947 ~ 3632121 (+)
AMCG00006383 NA coding upstream 56386 3585455 ~ 3596853 (+)
AMCG00006378 NA coding upstream 100885 3541718 ~ 3552354 (+)
AMCG00006374 NA coding upstream 224678 3426425 ~ 3428561 (+)
AMCG00006375 NA coding upstream 231721 3419315 ~ 3421518 (+)
AMCG00006389 NA coding downstream 80072 3749003 ~ 3763628 (+)
AMCG00006392 NA coding downstream 145682 3814613 ~ 3819824 (+)
AMCG00006396 NA coding downstream 154640 3823571 ~ 3824069 (+)
AMCG00006394 NA coding downstream 156637 3825568 ~ 3826749 (+)
AMCG00006395 ddx39b,uap56,LOC105012335,LOC104931065,LOC103042292 coding downstream 163330 3832261 ~ 3839998 (+)
G109389 NA non-coding upstream 104251 3548614 ~ 3548988 (+)
G109301 LOC103376870 non-coding upstream 259308 3340089 ~ 3393931 (+)
G109260 NA non-coding upstream 416838 3234905 ~ 3236401 (+)
G109218 NA non-coding upstream 584011 3016779 ~ 3069228 (+)
G109217 NA non-coding upstream 624593 3004856 ~ 3028646 (+)
G109405 NA non-coding downstream 30177 3699108 ~ 3714779 (+)
G109392 NA non-coding downstream 53588 3722519 ~ 3755041 (+)
G109412 NA non-coding downstream 60956 3729887 ~ 3730840 (+)
G109396 NA non-coding downstream 103618 3772549 ~ 3774544 (+)
G109523 LOC100846954 non-coding downstream 241030 3909961 ~ 3911048 (+)
AMCG00006387 NA other upstream 4328 3637743 ~ 3648911 (+)
AMCG00006379 NA other upstream 31443 3570039 ~ 3621796 (+)
AMCG00006385 NA other upstream 40481 3599241 ~ 3612758 (+)
G109362 NA other upstream 146560 3503181 ~ 3506679 (+)
G109309 NA other upstream 287674 3361354 ~ 3365565 (+)
AMCG00006393 ppp1r11,LOC107711309 other downstream 190003 3858934 ~ 3864732 (+)
G109538 NA other downstream 294666 3963597 ~ 3963996 (+)
G109570 NA other downstream 483885 4152816 ~ 4155749 (+)
AMCG00006413 NA other downstream 490592 4159523 ~ 4167952 (+)
G109714 NA other downstream 808003 4476934 ~ 4477570 (+)

Expression


Co-expression Network