AMCG00006402


Basic Information

Item Value
gene id AMCG00006402
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3873950 ~ 3878042 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006402
tatcGATTCAGTGGCCATAATGAAGGTCTGCACGTCATTCTCATGATCATTCGTGTATGTGGCCAGTTTCCGCACATGCTGACGTGAGACGTTTGGcaagatctgtgtgtgtggaggcaTCACACATATGTGCGCTGGCACCATTCGCTCTGCGTTTCAGGGGAAAGAGGCTGCCAGCGAGCTGCGTCATCCCGACACCGCCGCGGTCTGGTTTCGCCCGGATCCGAGGGGTACCGCGACTGACAGCTGCGAGTCCAATCCTCGGCCCGGACGGGCTGCCTGAGCCGGCCAATGGGAACCCAGACCCCGCTACCCCTTTCTGCCAGGGCCCGCCTATTCGTTTAAAGTTTACCCCTTCAGCTGCCCCTATGGGGGGTGTATTTACTGACATAGCCTCGGTCTTagtaaagtaaatgtattttactagaGCCGTCAGTTTATAGTTTCTGCCCTTTTGTCCTTATCTCGGGGTAAGTGTTAAATGTTGCCGGACAGCTGCGTCTGTTACAATGGCTTCTGCTCCGTCCGCCTCGGCCCGGGCTGCTGTCATCCGCTATCGGGGGAACCTATTCGGCAGGACACCAGCTAGCAAGCCGAGGCCTCCCTCCGGCAGCTACAGCCGGGGACTCGAGTACGGAGCGGCGAGGGGGACAGACCCGCCTCGGCGCGGCAGCGGGCTGTGCTGGCAGTGGGGAGGCGCTTTTCGGGAATGGGGGCAGGGGGTTTTCAGGGACCTGTCGATGGAGCTTCGAGGGGGCTCGCTGGCGGGGTGCAAGTGGCAGGTCACCCGGGGGAAGAAGCAGCAGCCCAGAGGGAAGAAGGCACTTTGTTCCGGACAGCCGCCTCATCCCAGGACTGCTGTCGGACTGGCCGCCGAGCCGAGGGTGAGCCGGGCCGAGGCCGAGCAGTGCCGCTGCCTGCGCGTCTGGGGGAGCTTCCGCTCGGTTTGGTGCCTGGTGGCTGGAGTGAACAAGGGACTGGGCTCGGTGTGCGGACGGACGGGTGGCCACGAACAGCTGGAGTCGAGAAGCAAGACTGTTTGCCTCCCCGCCCCCACAGTTTGGGCTCCGAGACCGGTTTTGCGAATAAGCTTTTTAACATCCCCGTCGGAGGACAGAGCCCGGGACCCTCTGCTGTGGGGCCGGCCCGAGTGGACTGCTCTGAGGAGAGGGGGGCTGCTGTGCACCGAGGTCGTGTCTGAAATGCTCCGGAGGAAACTGGGGCTCTGGTGTCGGCGTCTCTGGGCAGGACCGGGCGAGGTGGCCGCCGGCGTGGGATCCgccgccgctgctgctgcctcacagccgGGAGATGCGGAAGAGTCGGCTGTCCCGGCCGGGCGTGGGAGCGAACAGAAGTGGGACAAATCCTCCGCCTTGTCCATAGCGGCCAGAGACGACGGGCAGCCGGCGACCCCTGTTGAAGAGGTGGGCAGTGTGTCCGGACAGAGGCAGAACTGGCCCTCGGCTCTGGGGCAATGGGAGGCCGGCCTGGCAACCTCCACTGAAGCCGGAGAGAACAGGGAGCAGAGccagacactgcagcccaggGCAGAGACACTGAAGTCAGGGAGGAGAGCTATGACAGTGGGCAGGCTGGACTGAGACCTTTCACTACAGAGCATGGCAAGGTGTAGCCCAGGGGTGACTGAGCTTCTCCAAGGTCCTGGTTCTACCAAGCTGGGGGGAATCATGTCCATTTCCATATGTGTTTTCACACCCCTGTGTCGCTTTTGAAAGTCTTATTGGCTCTATATCATATTGCCAAGTGTTACCATTTAGAACTTAAAAAGCTGGTTATATTTAAGACCTGTACACTAAGGTGATCTGCTGTTTCTGGTTGTGGAGTTGGAAGtataaaaacattgtgtaacCTTGAGAGAGCCTTCAGATCTGTCCAGTTAAATCAAAGCCCTGTGTTTATCAACTGTTGAGTGTCCACTCATAATGATGGTTGGGCCCAGCGCTGGCTCCAATCTGGGCTCTGTACCATATAGTCCATCACAACATCACCCCTTCCCTCTAACCAGGCTCCAATGCAGAATAACACATCCAGAAGGCATTGCATTGTGGGAAGAGTGTGGTCTGCTTCCACTGCCATGTCTTTTCCCACCATCTGTCCTGCCATCTTGAAGGGCCCGATGCACAATTGTATAGGAACGGACTTCAGGACACCTTAGTGGTGTTTTAATTCTATACAATGTTCTAGAGCCCTTAATACTTTGTGGTGGGAGCCGATGTGTGAGACTctgaatagaaagaaagaaatgctgCTTGCATGAGCTGTCACTGCCACGACTATATCGATTGCACACGTAGAGTTTGTCACTGTGATTGGAGGAgggataattaaaaaaaggctgCACCCGGTTCACACATTGAGAAAGATCCTGTCCTGCCTACAGTGTAATGAAGTCCACACTGGCACTGGGTGCTGGGGACGTAGTGTATTGTAAAGTCCTGTACATGGTTCATAGTGTACCAGTTGAGGTGATTCCCAGGCACAGAATGGAAGAGAATGCTTTgaaaggttttcattttgagatttctggttttgttcactttttaatttccaCCAAGTAGCAGTAGGAGAGGCAGTACTAGtagtattaaaattaataaaacctgcACAAGGCAAAGTATGCTCTTCTGCACTCTTGTATGTTTTGTGCTCCTGGTTTACTGTGTCGTCTCGAGCTGGACATCTGAGGTCTGCACTGCTTTAGCCCTCAGAGTCACACTGTGTGTAGAACTGTTTAGTAATGTATCTATTGGAGTATTCAAAGGCAAAATCCCTTTataacattacaaagtgcaaaaagttataaaatgcaGAGTggattaacacaaaataaattgttatagaggaaagcaaaactgcaaagtAAAACACACTCTTAAAGCTAAGTGTTGATGTTATACACATATAATAGTTCTATGATCtcattatttcacattacacattttgtgTAGCTTTTATACAGTCTTGTGTTGGATAGCCTATTTCTCCAATGcagttaaaatgtgtttaactcCCAGATGCATTTTAAAGGGTGTTCTGACATATTGATAATCTACAGTAGTGTTTCTAAAGAATGCAGTTCTAAATTATtacatgtatatctatatatacatacatagatagacatttgtatatataaaacaacccGTTTTAAGATGAGCCCAGCATCTGTTGTCCCTCTTGAAATTGataaaagcttgttttgaataaatttgttttaatagcatAACTGCAACTGAAATAAGTTTATGATTACAATGTTCTTGAAAAGTCAGGGTATTCTGGAactaagtaaaataataaaaggctaATGTGTGACAACCGCGCAGTGCTGGTGATAAACGTGTGCAGGGTGCAGAGCAGAGAGCCGGGCCGGTGGATGCGTCGGTGCGGTCCTGATGTTCCCAGGTTGCTATTTCTGCCACATGGGGGCGAGGGAGGGAAACGGCACTGGGGAGAGATCGAGGAAGAGTAAgtgttgggaaaaaaatacacaacaaacttCACTTAGTGTAAATCacctttaaaattaatgtagtTAATAACTGTCctagttcattaaaaaaactaatgttTGTATAAAATAATCGGCCTAGAAACGGTGCATTAAAGCGGAGACTCGAATTTGtgattgtatatgttttaacagttaaatcttatccaaaataataaatcattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006402 True 3700 mRNA 0.50 2 3873950 3878042

Neighbor

gene id symbol gene type direction distance location
AMCG00006400 NA coding downstream 15033 3848364 ~ 3858917 (-)
AMCG00006397 NA coding downstream 26227 3839048 ~ 3847723 (-)
AMCG00006399 NA coding downstream 49977 3822915 ~ 3823973 (-)
AMCG00006401 NA coding downstream 95446 3776066 ~ 3778504 (-)
AMCG00006391 NA coding downstream 131669 3735291 ~ 3742281 (-)
AMCG00006407 NA coding upstream 162452 4040494 ~ 4043227 (-)
AMCG00006406 NA coding upstream 172184 4050226 ~ 4056245 (-)
AMCG00006405 NA coding upstream 180716 4058758 ~ 4066143 (-)
AMCG00006419 NA coding upstream 211258 4089300 ~ 4090132 (-)
AMCG00006416 LOC104947235,LOC104953484 coding upstream 221405 4099447 ~ 4108705 (-)
G109514 NA non-coding downstream 6909 3866720 ~ 3867041 (-)
G109483 NA non-coding downstream 39527 3826510 ~ 3834423 (-)
G109472 NA non-coding downstream 66163 3805656 ~ 3807787 (-)
G109439 NA non-coding downstream 218827 3586596 ~ 3655123 (-)
G109432 NA non-coding downstream 312006 3548614 ~ 3561944 (-)
G109540 NA non-coding upstream 98161 3976203 ~ 3976617 (-)
G109609 NA non-coding upstream 98667 3976709 ~ 4035331 (-)
G109619 NA non-coding upstream 203765 4081807 ~ 4083452 (-)
G109628 NA non-coding upstream 260992 4139034 ~ 4139269 (-)
G109632 NA non-coding upstream 285940 4163982 ~ 4164557 (-)
AMCG00006398 NA other downstream 58433 3730042 ~ 3815517 (-)
AMCG00006390 NA other downstream 145431 3698885 ~ 3728519 (-)
AMCG00006354 NA other downstream 979416 2888486 ~ 2894534 (-)
AMCG00006344 NA other downstream 1287104 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 1543959 2324131 ~ 2329991 (-)
AMCG00006414 NA other upstream 274774 4152816 ~ 4158123 (-)
G109633 NA other upstream 286892 4164934 ~ 4165600 (-)
AMCG00006415 NA other upstream 290008 4168050 ~ 4177052 (-)
AMCG00006429 NA other upstream 392374 4270416 ~ 4277155 (-)
AMCG00006476 NA other upstream 1699428 5577470 ~ 5603733 (-)

Expression


Co-expression Network