AMCG00006403


Basic Information

Item Value
gene id AMCG00006403
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4079626 ~ 4082166 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006403
AGGTTTGTTGTTGACATCGCGGAAGTGACTTTTCTACAGTATGTGAGTTTATGCTTTGTTGTTGTGTCAAACTAAAGtttcagtcttttaaaatatgcatatgtCCGATACACGACTTTCACTCTGAGCCATTCAACCTTTCAAGACATAGTTTGTTAATTACACGATGGCACGAATCATGCTGTACTTTGAtcgacagaaaaaaaaaactagggCGTAATTATACAGTTTGTGATGTATTACAGTGAAATATACgaatacaattacacaaaaacCCAGATATatcaatttcaaaacatgttaTGAAGAAGATCTATTTAAAAGTAGATTATAGATATATAAGTCAAagtccattttaaaacaatagatTGCAAAGCTGCGTGTATCCGGATATATACGCACAATGATAATACAAGCACTTACTGTAACTTTACAGCAGAGAGAAGCGGGATCATCAATTTAATGGAAAAcATGGCGTCAAATGGGCCGTCCTCACCCTCCCCAGTGTCCAGCCACAGCCCACCTGACCTCGGCTCCTCCAATCAGCAGGACAGCGGCAAGCCAGAGGGGGATGAGGCAGGAAACGAGGAGGGGAACCGGGAGAGGATTCAAAATGACCATGCAGGTGAACTGGTCATACCAACGCCCCCACCCGGAGCAGAGCCAGTGCCagcagagactgagagagaggaacaAGGCGCCGATAAGTCacagaagggagagaggaagaaaggaagaggtggagggcgagggcgaggggtAGGGCGAGGGGCAGTGCGGGCAGGGCGGGCAGGGGAGtgtgagagggagaaagaggagaggggggcagggggagagGATGAAAAGAAGCCCCCCATGAGGACGGCGGACGACGTGATCGCACGGATCCGCTGGGACCCCTCTCTGGACGCCTCCTTGTTCTCCGTGGGCTTCCTGGACCGCTtcctggggctgctggagcggCCCTTCAGCCAGTTCTCCTGGGACGCCGAGCTGTGCAGCGTGGACTGCAGCCAGGAGCTGGCTGTGCCCAGACATCGCATCCAGTACTTCAACTGCGGGGGGCGGCGCGTCTGGGACCGGGCGGCCAGACTGGACCGGGTGTTCGGCTCCACGGGAGACCCTCTCGACCCCCTCTGTGCAGAGCAGGGGGAGGAAGGAAGTGGTGTCGCCCAAGAAACTGGAACTAACCAGCCAGAAATGGGATGCGAAGCACAGCAAACAGGAAGCGATCTACCAGCAACAGGAAGTTCCCTgcaagaaaaaggaaatgaagaGCAGCCAATTGGGGAAAGTGATCTCAACCTAGGAAGTGCCCAAGGGGACGCAGGAAACTGTCAGCAGGAAGATGGGAAGACGGCTGATCTGCAGATCTCCGCAGAACGGTTGTCTCTGTCCTCCACAGCAACGGACGCCCAGGAAAGTGAAACAACCAACGATGAAGAGAAGAGAgtagagaaggaggaggagaaggggatGAAACATGACTGGGATATTTCAGAGGCGGGGTCCTGTACTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006403 True 1521 mRNA 0.52 4 4079626 4082166

Neighbor

gene id symbol gene type direction distance location
AMCG00006408 NA coding upstream 155106 3922421 ~ 3924520 (+)
AMCG00006409 NA coding upstream 157698 3921234 ~ 3921928 (+)
AMCG00006410 NA coding upstream 158844 3919904 ~ 3920782 (+)
AMCG00006404 NA coding upstream 183168 3893263 ~ 3896458 (+)
AMCG00006395 ddx39b,uap56,LOC105012335,LOC104931065,LOC103042292 coding upstream 239628 3832261 ~ 3839998 (+)
AMCG00006411 LOC108414231,LOC106024139,LOC101061046,LOC101068669,LOC105419728,LOC105419724,LOC105419151,LOC105416979,LOC107747774,LOC105419136 coding downstream 9522 4091688 ~ 4099718 (+)
AMCG00006420 NA coding downstream 51702 4133868 ~ 4134566 (+)
AMCG00006412 NA coding downstream 65538 4147704 ~ 4151691 (+)
AMCG00006423 NA coding downstream 96884 4179050 ~ 4185310 (+)
AMCG00006424 ino80e coding downstream 105427 4187593 ~ 4190086 (+)
G109541 NA non-coding upstream 44318 3976728 ~ 4035308 (+)
G109532 NA non-coding upstream 135632 3943769 ~ 3943994 (+)
G109530 NA non-coding upstream 142724 3935980 ~ 3936902 (+)
G109523 LOC100846954 non-coding upstream 168578 3909961 ~ 3911048 (+)
G109396 NA non-coding upstream 305082 3772549 ~ 3774544 (+)
G109571 NA non-coding downstream 73798 4155964 ~ 4156206 (+)
G109572 NA non-coding downstream 74276 4156442 ~ 4156969 (+)
G109573 NA non-coding downstream 75570 4157736 ~ 4159191 (+)
G109575 NA non-coding downstream 85918 4168084 ~ 4169106 (+)
G109597 NA non-coding downstream 148068 4230234 ~ 4230484 (+)
G109538 NA other upstream 115630 3963597 ~ 3963996 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 214894 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 430715 3637743 ~ 3648911 (+)
AMCG00006379 NA other upstream 457830 3570039 ~ 3621796 (+)
AMCG00006385 NA other upstream 466868 3599241 ~ 3612758 (+)
G109570 NA other downstream 70650 4152816 ~ 4155749 (+)
AMCG00006413 NA other downstream 77357 4159523 ~ 4167952 (+)
G109714 NA other downstream 394768 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 442640 4524806 ~ 4527738 (+)
G109781 NA other downstream 942729 5024895 ~ 5025906 (+)

Expression


Co-expression Network