AMCG00006409


Basic Information

Item Value
gene id AMCG00006409
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3921234 ~ 3921928 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006409
ATGAAGCAAGTTAAAATCACTCCAAGCTGCTTGTTTGTTCATCAGAATGTTGCAGACACAGCAGCAAGTGATAAAAATACGGAAGGAAGAAGGCATCTGAAGGAGAGACTGGATGAAATTGCCCAAATTGCTGCCAAAGAAGAACACATTGACGTGACAGGTTTCAGTGACATAATTCAGTTTGATATGGAATCTCAGGTGTTCTACTTCAAAAGTCTTCTGCAAGGAGACCCCCCGATGGCTCCTCCAAACCCTTCCTATAGCCAGAACATTCAGGAACTGAAGACCAAGCTGCTCTCCATTGCAAAGTGGCAGCCAAACTGTACCTTTTATTCAATTTCAGGTTTTAAAGCACGCATCAATGATCTCTGGAATGCGCTGCTGAGGGAAAACTTTAAATACTTTGGAGCTTTCAGTTTACGCCAGATTGGAGAAAAAGTTTGGGACTGGAAGTGGACCATGAGAAAACATGCCCCTGAGGTACAAAACAGATTGAAAAGGCAAATTAAGAACAACATTCAACATGATGTATATAAACCAGATCTGATTCAGGAATTTAACCCAATAAACAGTAGTCTGACTGAAGAAATAGAGAAGTACTTCAAAGAGGATAAGCACCCAGTGTTGCTTGTTCAATTTAGGGTGAACATTgataatagatttaaaaatgtggaaaattag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006409 True 681 mRNA 0.40 2 3921234 3921928

Neighbor

gene id symbol gene type direction distance location
AMCG00006410 NA coding upstream 452 3919904 ~ 3920782 (+)
AMCG00006404 NA coding upstream 24776 3893263 ~ 3896458 (+)
AMCG00006395 ddx39b,uap56,LOC105012335,LOC104931065,LOC103042292 coding upstream 81236 3832261 ~ 3839998 (+)
AMCG00006394 NA coding upstream 94485 3825568 ~ 3826749 (+)
AMCG00006396 NA coding upstream 97165 3823571 ~ 3824069 (+)
AMCG00006408 NA coding downstream 493 3922421 ~ 3924520 (+)
AMCG00006403 NA coding downstream 157698 4079626 ~ 4082166 (+)
AMCG00006411 LOC108414231,LOC106024139,LOC101061046,LOC101068669,LOC105419728,LOC105419724,LOC105419151,LOC105416979,LOC107747774,LOC105419136 coding downstream 169760 4091688 ~ 4099718 (+)
AMCG00006420 NA coding downstream 211940 4133868 ~ 4134566 (+)
AMCG00006412 NA coding downstream 225776 4147704 ~ 4151691 (+)
G109523 LOC100846954 non-coding upstream 10186 3909961 ~ 3911048 (+)
G109396 NA non-coding upstream 146690 3772549 ~ 3774544 (+)
G109392 NA non-coding upstream 166193 3722519 ~ 3755041 (+)
G109412 NA non-coding upstream 190394 3729887 ~ 3730840 (+)
G109405 NA non-coding upstream 206455 3699108 ~ 3714779 (+)
G109530 NA non-coding downstream 14052 3935980 ~ 3936902 (+)
G109532 NA non-coding downstream 21841 3943769 ~ 3943994 (+)
G109541 NA non-coding downstream 54800 3976728 ~ 4035308 (+)
G109571 NA non-coding downstream 234036 4155964 ~ 4156206 (+)
G109572 NA non-coding downstream 234514 4156442 ~ 4156969 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 56502 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 272323 3637743 ~ 3648911 (+)
AMCG00006379 NA other upstream 299438 3570039 ~ 3621796 (+)
AMCG00006385 NA other upstream 308476 3599241 ~ 3612758 (+)
G109362 NA other upstream 414555 3503181 ~ 3506679 (+)
G109538 NA other downstream 41669 3963597 ~ 3963996 (+)
G109570 NA other downstream 230888 4152816 ~ 4155749 (+)
AMCG00006413 NA other downstream 237595 4159523 ~ 4167952 (+)
G109714 NA other downstream 555006 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 602878 4524806 ~ 4527738 (+)

Expression


Co-expression Network