AMCG00006410


Basic Information

Item Value
gene id AMCG00006410
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3919904 ~ 3920782 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006410
ATGGTGATGCCAGGAAACACCAGAAACATCTTCAGTTTCTTCAGGAAATTAAGCTTAAAAAAATTCCTTAGCTCACAAAAAGAGGCTTCCAGTCCATACTCATGGATAGGAAAAGCAAGAGATTTAAAATTTCAAATAGATGAGgacaatgaaaaatgcaaagcaggaagaaatttaatatttaacaaaaatatcaaaatgcagCTATTGCCTTTGCACAGGAAACTCTGTCATGACTGGTGCAAGAAGGATAAAGAACAGTATAGGCTGACagacaaagcaaataaaagcaTTGAACAGAAACAATCTGATATCCAATCAGAGAAGCAGGCCATTCGAAAAGAGCAGATGGAAATAGCTCATACAGATAAGTCTTTCATGAATTATTTGGGGCTCCAGATTCTGAagatactgaaatatatatgttgcaGTGGCTACAAATGTTCAGAATCTTTGAACTTCAAGAAAAATATGGCTCTACATGGATTACACTTGTCAAAAGATAAAGTTTTAATCAAAGTACAACATCAGCTGGAGGAAGTATCTGCAGAAATTAAGGATACCTTATCAGAGAAATGGGTTAGCTGTATGAGGCCATACTGGCAACTCCAGAAGCAATCTTCAATCAGTTCGATCTTGCAGAAATTGGAGCTGGTATACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006410 True 663 mRNA 0.36 4 3919904 3920782

Neighbor

gene id symbol gene type direction distance location
AMCG00006404 NA coding upstream 23446 3893263 ~ 3896458 (+)
AMCG00006395 ddx39b,uap56,LOC105012335,LOC104931065,LOC103042292 coding upstream 79906 3832261 ~ 3839998 (+)
AMCG00006394 NA coding upstream 93155 3825568 ~ 3826749 (+)
AMCG00006396 NA coding upstream 95835 3823571 ~ 3824069 (+)
AMCG00006392 NA coding upstream 100080 3814613 ~ 3819824 (+)
AMCG00006409 NA coding downstream 452 3921234 ~ 3921928 (+)
AMCG00006408 NA coding downstream 1639 3922421 ~ 3924520 (+)
AMCG00006403 NA coding downstream 158844 4079626 ~ 4082166 (+)
AMCG00006411 LOC108414231,LOC106024139,LOC101061046,LOC101068669,LOC105419728,LOC105419724,LOC105419151,LOC105416979,LOC107747774,LOC105419136 coding downstream 170906 4091688 ~ 4099718 (+)
AMCG00006420 NA coding downstream 213086 4133868 ~ 4134566 (+)
G109523 LOC100846954 non-coding upstream 8856 3909961 ~ 3911048 (+)
G109396 NA non-coding upstream 145360 3772549 ~ 3774544 (+)
G109392 NA non-coding upstream 164863 3722519 ~ 3755041 (+)
G109412 NA non-coding upstream 189064 3729887 ~ 3730840 (+)
G109405 NA non-coding upstream 205125 3699108 ~ 3714779 (+)
G109530 NA non-coding downstream 15198 3935980 ~ 3936902 (+)
G109532 NA non-coding downstream 22987 3943769 ~ 3943994 (+)
G109541 NA non-coding downstream 55946 3976728 ~ 4035308 (+)
G109571 NA non-coding downstream 235182 4155964 ~ 4156206 (+)
G109572 NA non-coding downstream 235660 4156442 ~ 4156969 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 55172 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 270993 3637743 ~ 3648911 (+)
AMCG00006379 NA other upstream 298108 3570039 ~ 3621796 (+)
AMCG00006385 NA other upstream 307146 3599241 ~ 3612758 (+)
G109362 NA other upstream 413225 3503181 ~ 3506679 (+)
G109538 NA other downstream 42815 3963597 ~ 3963996 (+)
G109570 NA other downstream 232034 4152816 ~ 4155749 (+)
AMCG00006413 NA other downstream 238741 4159523 ~ 4167952 (+)
G109714 NA other downstream 556152 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 604024 4524806 ~ 4527738 (+)

Expression


Co-expression Network