AMCG00006418


Basic Information

Item Value
gene id AMCG00006418
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4125812 ~ 4130857 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006418
TCGAAACTTATCAACATGGCTTCTGCTGCCGGGCTTGTGGACGGTCTGTCCTGCGGGCTGTGCCACGAAATTTACCGCGACCCCCTGGAGCTGCCCTGCGGACACTTCTACTGCCGGTGAGCGCGGAGCCACGGCCGGCCGGCGGCACCAATTCAGCCAAAAGGGAGCACATTTCTGCAGCCTACCTGGGGACTTGAGTCACAGGAAAGTGAAAAACTGACAGTCATTGAAATGCACGCATCAGAAagctacataataataataataataataataataataactaaatggCGCAGGACTCGGTGACTCATCACCACGAGGAGTATTAGTACTTCAATGACTCATCAACTTTTTTACAAACTCTAAACACAACGCCTTCACGTAAACTCAAAAGATCCTGTCACTCATAAGGGGTTATttgttcttctcctcctcctcccgttTCAGATCCTGTGTAGATGATTTACAGCAGCAACAGGAGACCCCAAGCTGCCCGCAGTGCCGAGCGGAGTTCTCCCCTGCAGCCGTCAGGTCCAACCCCGTGTTGAACGCCCTGCTGGCACACTGGAGGGCCGTCCCCCGCCCGCCGTCCCCGCCGGATCGCCCCCTCTGCCCGGCTCACGGGCGGGCGCTGGACCGCTACTGCCTGGGCGACGCGGAGCTGCTGTGCGTGGACTGCCGCGACTCCCGGCCGCACCTGTACCATGAGGTGCTCAACGCCAGGGACGCCGTGCAGGAGTTCAAGGAGAAATTTGAAAACTCTGCCGCGAAGCTCAAAGGACGAATGGAACGACTGAGCTCCCAGAAAGATGGCTACACGGCCCTGCTACAGGGAATAGAGGACCAAACGCGGAGCGCAGAGGAGCGGATCCGGGAGAGCTTCGGGAAGCTGCGCTCGTTCATGGAGGAAGAGGAGCGGGCTGCGCTGCAGAGGctgtgggagcaggagggggtgGCCCGGGTGGCGGTCATGGAGGCGGTGCAAGCGGCAGACGAGGGGCTGCAGCTGCTGGCAGGCAGTCTGGATGCTCTGCAGCTCCAGCTTAAGGAGGAGGACAACGTGGCTTTTTTGAAGAACATAGAAGACACTCGCCAAaaGGCCGATGTGATCCTGGGAGCCATTCCGGAGCCCAGCGTGACCTCAGAGCAGCTGCTGTGGGCGGGGCCTCTGCAGTTCTGGGTCTGGAAGAAGATGCGCAGTGTCCTGGATCTTGGTAGGGGGATTGGGATCTGCCTGGACTACGCTGCGGGGAAGCTGTCCTTCTTCAACCCCGACCGTCCCGCTCACATCTACAGCTTCCAGGCCTCCTTCGCTGGGCCGCTGCACCCCTTCTTCTTTGTGGGCGTCTCGATCAGCAAAGACATCCCGCTGAGCATCGTCCCGGCTCAGGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006418 True 1396 mRNA 0.59 6 4125812 4130857

Neighbor

gene id symbol gene type direction distance location
AMCG00006417 vars2,vars,LOC107379499 coding downstream 2175 4109975 ~ 4123637 (-)
AMCG00006416 LOC104947235,LOC104953484 coding downstream 17107 4099447 ~ 4108705 (-)
AMCG00006419 NA coding downstream 35680 4089300 ~ 4090132 (-)
AMCG00006405 NA coding downstream 59669 4058758 ~ 4066143 (-)
AMCG00006406 NA coding downstream 69567 4050226 ~ 4056245 (-)
AMCG00006422 NA coding upstream 1111 4131968 ~ 4132747 (-)
AMCG00006421 NA coding upstream 3753 4134610 ~ 4141634 (-)
AMCG00006431 NA coding upstream 58992 4189849 ~ 4193150 (-)
AMCG00006425 NA coding upstream 64463 4195320 ~ 4197795 (-)
AMCG00006426 NA coding upstream 69904 4200761 ~ 4217871 (-)
G109619 NA non-coding downstream 42360 4081807 ~ 4083452 (-)
G109609 NA non-coding downstream 90481 3976709 ~ 4035331 (-)
G109540 NA non-coding downstream 149195 3976203 ~ 3976617 (-)
G109514 NA non-coding downstream 258771 3866720 ~ 3867041 (-)
G109483 NA non-coding downstream 291389 3826510 ~ 3834423 (-)
G109628 NA non-coding upstream 8177 4139034 ~ 4139269 (-)
G109632 NA non-coding upstream 33125 4163982 ~ 4164557 (-)
G109634 NA non-coding upstream 35471 4166328 ~ 4166589 (-)
G109635 NA non-coding upstream 36094 4166951 ~ 4167239 (-)
G109616 NA non-coding upstream 135970 4266827 ~ 4268470 (-)
AMCG00006398 NA other downstream 310295 3730042 ~ 3815517 (-)
AMCG00006390 NA other downstream 397293 3698885 ~ 3728519 (-)
AMCG00006354 NA other downstream 1231278 2888486 ~ 2894534 (-)
AMCG00006344 NA other downstream 1538966 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 1795821 2324131 ~ 2329991 (-)
AMCG00006414 NA other upstream 21959 4152816 ~ 4158123 (-)
G109633 NA other upstream 34077 4164934 ~ 4165600 (-)
AMCG00006415 NA other upstream 37193 4168050 ~ 4177052 (-)
AMCG00006429 NA other upstream 139559 4270416 ~ 4277155 (-)
AMCG00006476 NA other upstream 1446613 5577470 ~ 5603733 (-)

Expression


Co-expression Network