AMCG00006420


Basic Information

Item Value
gene id AMCG00006420
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4133868 ~ 4134566 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006420
ATGGTCTTGTTTAACCAAGATCTGACCGTGTGCACCAGCATCTGGTACAATGCCTTGCTCTGCCTCTATTACTGCCTCAAGATCCTCCCTGCAAAGACAGGCTGCTTCAGGGTTATCAAGTCCCATCTCTCCTGCTTGGTGTGCTGGGCGTTGTTGATCATCTTCTTCCTCTGCTTCGGCATGTCTTGGAACTCGCTTTTGAAGGGCCACTGCCGGCCCCAAAACCTCACCAACGCCACAGAGCTGCTGTTGACGTATGACTGTACAGTCAAACAGGAGAATCTTATCTTTACAGTTGTGGGCTCCTTCCTGTTCTTGGCGCTGCCCCTCACAGTCATGACGGCCTCCTGCGTGGCCATCCTCCGCCACCTGCGGGCCCACATCCGCCGCATGAAGAGCGGCTGCAGTGAGTTCTCCTCGTCGCCACGTCTGGACAGCGAGCGGAGGGTGATGCGCTTGATGTCCTGCCAGGTGCTGCTGTACAGTGTCTCCCTCATCCTGTACATCATGTTGAGCTATTCCAGCAATGTTTTGCCACAGTTTCAGCTCTACGCCAACATCCCCCTGACCCTGTTCTGCTTGACCACGTCCGTCAACTTTCTGCTCCGCAATCCCAACCTGCGTCAGGGTGCCACCTACCTGGGCCGCCGGGCTCTCTGTCAGGATGCCCCCAATCAACTGGACGAAGACCCCGAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006420 True 699 mRNA 0.56 1 4133868 4134566

Neighbor

gene id symbol gene type direction distance location
AMCG00006411 LOC108414231,LOC106024139,LOC101061046,LOC101068669,LOC105419728,LOC105419724,LOC105419151,LOC105416979,LOC107747774,LOC105419136 coding upstream 34150 4091688 ~ 4099718 (+)
AMCG00006403 NA coding upstream 51702 4079626 ~ 4082166 (+)
AMCG00006408 NA coding upstream 209348 3922421 ~ 3924520 (+)
AMCG00006409 NA coding upstream 211940 3921234 ~ 3921928 (+)
AMCG00006410 NA coding upstream 213086 3919904 ~ 3920782 (+)
AMCG00006412 NA coding downstream 13138 4147704 ~ 4151691 (+)
AMCG00006423 NA coding downstream 44484 4179050 ~ 4185310 (+)
AMCG00006424 ino80e coding downstream 53027 4187593 ~ 4190086 (+)
AMCG00006432 NA coding downstream 119768 4254334 ~ 4266243 (+)
AMCG00006433 NA coding downstream 217086 4351652 ~ 4360196 (+)
G109541 NA non-coding upstream 98560 3976728 ~ 4035308 (+)
G109532 NA non-coding upstream 189874 3943769 ~ 3943994 (+)
G109530 NA non-coding upstream 196966 3935980 ~ 3936902 (+)
G109523 LOC100846954 non-coding upstream 222820 3909961 ~ 3911048 (+)
G109396 NA non-coding upstream 359324 3772549 ~ 3774544 (+)
G109571 NA non-coding downstream 21398 4155964 ~ 4156206 (+)
G109572 NA non-coding downstream 21876 4156442 ~ 4156969 (+)
G109573 NA non-coding downstream 23170 4157736 ~ 4159191 (+)
G109575 NA non-coding downstream 33518 4168084 ~ 4169106 (+)
G109597 NA non-coding downstream 95668 4230234 ~ 4230484 (+)
G109538 NA other upstream 169872 3963597 ~ 3963996 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 269136 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 484957 3637743 ~ 3648911 (+)
AMCG00006379 NA other upstream 512072 3570039 ~ 3621796 (+)
G109570 NA other downstream 18250 4152816 ~ 4155749 (+)
AMCG00006413 NA other downstream 24957 4159523 ~ 4167952 (+)
G109714 NA other downstream 342368 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 390240 4524806 ~ 4527738 (+)
G109781 NA other downstream 890329 5024895 ~ 5025906 (+)

Expression


Co-expression Network