AMCG00006421


Basic Information

Item Value
gene id AMCG00006421
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4134610 ~ 4141634 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006421
ATGGCTCAGCTCTTGATAGTCGCAGCAGCAGCGATTCTCAGCAACATGCTGGTGCTGTTTTGCCTGGCACTGCCGGGGACAGAAACTCAGAGAAACTCGGCTATAACTCCGGCCGTGGCCTCGGTGGCCGTCTCCAACACACTGCTTTCGCTCTTCTCGGCCCTGTACTTCTGGTGCGCTGTCTTTAACCTCTCGCCACTCTCTTATGCCATGCAGTACCTGGCCACCTTGAATATGTACACTACCAGCTGTTTCAGCACTCTGCTCTGCCTCTTCTACTCTGCTAAAATCGTACCTGCCAAGTCTCGCCTCTGCCTCAGTCTCAAGCACGACTTTGCCCGCACGGTGACCCGCTGCCAACTGGGCGGCTTCCTCCTATGCCTCAGCCTCTCCTGCACCTTCTTCCTGCTCGCTTTCACGGGCATTTGTGCCACCATTGGCTGCGGTGCCAGCATCattgttttgctgtgtgtgcTCCGGACCCGGTATGTTGAGCTCAAGGAGAAGAGAACCAGCGACGCCAACCTAATCATTGGCACCGTGGCCATATCCAACATGCTGATGTGCCTGAACACGGCGGTGTGGGCTCTAGATAATAGTGTCAACAATTTTTGCAAATACCCTGTCATTGCCACCATGGTCTTGTTTAACGAAGTTCTGACTGTGTGCACCAGCATCTGGTATAACGCCTTGCTCTGCCTCTATTACTGCCTCAAGATCCTCCCTGCAAAGACAGGCTGCTTCAGGGCCATCAAATCCCATCTCTCCCACTCGGTGCGCTGGGCGTTGTTGATCATCTTCTTCCTCTGCTTCGGCATGTCTTGGAACTCGCTTCTGAAGGGCCACTGCCAGCCCCAAAACCTCACCAACTCCACAGAGCTCCTGGCGACATATGAAAGTACAGTCAAACAGGAGAATCTTATCTTTACAGTTGTGGGCTCCTTCCTGTTCTTGGTGCTGCCCTTCACAGTCATGACGACCTCCTGCGTGGCCATCCTCCGCCACCTGCGGGCCCACATCCGCCGCATGAAGAGCGGCTGCAGTGAGTTCTCCTCGTTGCCACGTCTGGACAGCGAGCGGAGGGTGATGCGCTTGATGTCCTGCCAGGTGCTGCTGTACAGCGTCTCCCTCATCCTGTACACCTGGATGAGCTATTCCAACAGTGACGTGACACAGTTTCAATTCTACTCCACCATCCCCCTGACCCTGTTCTGCTTGACTACGTCCGTCAACTTTCTGCTCCGCAATCCCAACCTGCGTCAGAGTGCCACCTACCTGGGCCGCCGGGCTCTCTgtggaatgaaaaccagatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006421 True 1314 mRNA 0.55 3 4134610 4141634

Neighbor

gene id symbol gene type direction distance location
AMCG00006422 NA coding downstream 1863 4131968 ~ 4132747 (-)
AMCG00006418 NA coding downstream 3753 4125812 ~ 4130857 (-)
AMCG00006417 vars2,vars,LOC107379499 coding downstream 10973 4109975 ~ 4123637 (-)
AMCG00006416 LOC104947235,LOC104953484 coding downstream 25905 4099447 ~ 4108705 (-)
AMCG00006419 NA coding downstream 44478 4089300 ~ 4090132 (-)
AMCG00006431 NA coding upstream 48215 4189849 ~ 4193150 (-)
AMCG00006425 NA coding upstream 53686 4195320 ~ 4197795 (-)
AMCG00006426 NA coding upstream 59127 4200761 ~ 4217871 (-)
AMCG00006430 NA coding upstream 80444 4222078 ~ 4230525 (-)
AMCG00006427 NA coding upstream 92030 4233664 ~ 4242559 (-)
G109619 NA non-coding downstream 51158 4081807 ~ 4083452 (-)
G109609 NA non-coding downstream 99279 3976709 ~ 4035331 (-)
G109540 NA non-coding downstream 157993 3976203 ~ 3976617 (-)
G109514 NA non-coding downstream 267569 3866720 ~ 3867041 (-)
G109483 NA non-coding downstream 300187 3826510 ~ 3834423 (-)
G109632 NA non-coding upstream 22348 4163982 ~ 4164557 (-)
G109634 NA non-coding upstream 24694 4166328 ~ 4166589 (-)
G109635 NA non-coding upstream 25317 4166951 ~ 4167239 (-)
G109616 NA non-coding upstream 125193 4266827 ~ 4268470 (-)
G109689 NA non-coding upstream 166539 4308173 ~ 4311951 (-)
AMCG00006398 NA other downstream 319093 3730042 ~ 3815517 (-)
AMCG00006390 NA other downstream 406091 3698885 ~ 3728519 (-)
AMCG00006354 NA other downstream 1240076 2888486 ~ 2894534 (-)
AMCG00006344 NA other downstream 1547764 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 1804619 2324131 ~ 2329991 (-)
AMCG00006414 NA other upstream 11182 4152816 ~ 4158123 (-)
G109633 NA other upstream 23300 4164934 ~ 4165600 (-)
AMCG00006415 NA other upstream 26416 4168050 ~ 4177052 (-)
AMCG00006429 NA other upstream 128782 4270416 ~ 4277155 (-)
AMCG00006476 NA other upstream 1435836 5577470 ~ 5603733 (-)

Expression


Co-expression Network