AMCG00006425


Basic Information

Item Value
gene id AMCG00006425
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4195320 ~ 4197795 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006425
TGACCATGACTTAAATGATGTGTGGTCAGCACAGAGTTTCGGCTTGGGCTTATATATATGTGAACTGCACAGATCAGAGTCAGTGAAGAGGATCGTGACACACAGGCTGGTGCACATTGGAGATCAAGGAGTCCTTCTCTCCTCCCAGTCAGTATGCCTCTTTCATGGGTGATCTGTCTCATTCTGGTCCTTGTGGATTTGTTGGGGGGTGTCCGGGGGGAGGTTGGCAATTTCTCCCCCTGCCTACACTTCTTCTACAAGGGGAGTCCCCCCAAAGGTTTGGGGTCGGGGTCGGGGCCGGGGTGGTCGAAGATCTGCCAGCGCTACAAGAACCAGTACCGCTTTGCTAGTCTGTATCGCAGCCAGTGGCGGTCTCCTCTGTACTCGGCGTATATATTCACTCCCGGGGGCATGAAGAGGCCCCCAACCCAGTGGAAGTATGAACCACAGCTGGCCAGCTCCTCAGCCAGCCCAAACATGAAGCCATTCCCTCCAGAGGTGCTGGACCAGAACGTACTGGACAGCCAGGCGGTGCTGCCCGACTACACCAACTCCTCCTACACCAAGGGCCACCTGAGCCCCAACCTCCATCACCGCGACCTCCTGGACAAGAAGGCAACCTTCACCCTTACCAATGTGGTGCCCCAAAAGGCCGGCTCCAACGGGGGGCCCTGGGCGCAGCTGGAGGCCCTAGTGAGAGCCAGGCTGACGGATTACTGCACAGGGCCGGCCTTCGTTGTGACCGGGCAGCTGCCTTATGCCCAGCCAAGGTCCATCAACAACAGGGTGGCCGTGCCCGAGTATCTGTGGTCGGCCTACTGCTGCCCAACCTACAACCACAGCCTGCCCGGAGGTCTACAGGAGACCTTCCCCACGTTTGCCGCCATGGGCAGGAACGACCCCCTGAGCAGCCAGGAGATAGTTCCCGTAAACTCCAGCGCCAGGGCCACGGTGCGGGGGTACGACGTGAGGAGCATGCCCCTGAAGATCCTGGAGAAGTACCTGGAGCAGAGGCTGGGGGAGCCGGTGCATGTCTTCTCTGAGTGCTGCTCGGGGGCCGGCGACTGAGGGGCGAGGAGCAGAGCGACTGTGTTGTGACGGAGGATGCTGTGAAGGGGGGGTTACTTTGACCTGGTTGTCTGgctttatctgtgtgtgtgtttgtaagtcTGGTCAGATCATTACATCAGCTGACTGGTGAgacaactatttaaaatgttaatttatccAATAGATCTGAATCAATAGAATTACTTTGGTTTCAGATTGTAAAGCCCCAGTTACAACTAGCCTGgtttctctgtgtatttcattaaatgtgtgcattttacCAGAATAATATACCTTAAAAATCTCCTGCTTGAGTTGGTTAGTGTACTCTATGATCTGTAAGCTTAAAAActagtttttttgcttttagaGTTTAAAAGTGCCATCATTATATAGTTTGTATATATAACAATGTTCTCTCTCCTGCCAGCTGGCCGGCTCCTTAGCCAGCCCAGACATGAGGCCATTCCCCTGGGGTTTGTTTGTATTGTCCTTGGGAAATATCAtcatattgttattaaaacactttaaattgcTTACTGTACCTTGAGTGACATTTTACAAGAATCTTTCCTATATCAAAGATACtgctaaataaatgtatgctaATGATTCTTTATACAACCtgctttgttcatttttaaacccAAACCCTCAGTGATCTAAAGCTTGTCTATGTGTACagaagacaagaaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006425 True 1749 mRNA 0.51 2 4195320 4197795

Neighbor

gene id symbol gene type direction distance location
AMCG00006431 NA coding downstream 2170 4189849 ~ 4193150 (-)
AMCG00006421 NA coding downstream 53686 4134610 ~ 4141634 (-)
AMCG00006422 NA coding downstream 62573 4131968 ~ 4132747 (-)
AMCG00006418 NA coding downstream 64463 4125812 ~ 4130857 (-)
AMCG00006417 vars2,vars,LOC107379499 coding downstream 71683 4109975 ~ 4123637 (-)
AMCG00006426 NA coding upstream 2966 4200761 ~ 4217871 (-)
AMCG00006430 NA coding upstream 24283 4222078 ~ 4230525 (-)
AMCG00006427 NA coding upstream 35869 4233664 ~ 4242559 (-)
AMCG00006428 NA coding upstream 47390 4245185 ~ 4251723 (-)
AMCG00006435 NA coding upstream 116927 4314722 ~ 4330918 (-)
G109635 NA non-coding downstream 28081 4166951 ~ 4167239 (-)
G109634 NA non-coding downstream 28731 4166328 ~ 4166589 (-)
G109632 NA non-coding downstream 30763 4163982 ~ 4164557 (-)
G109628 NA non-coding downstream 56051 4139034 ~ 4139269 (-)
G109619 NA non-coding downstream 111868 4081807 ~ 4083452 (-)
G109616 NA non-coding upstream 69032 4266827 ~ 4268470 (-)
G109689 NA non-coding upstream 110378 4308173 ~ 4311951 (-)
G109692 NA non-coding upstream 146592 4344387 ~ 4349812 (-)
G109735 NA non-coding upstream 316515 4514310 ~ 4515575 (-)
G109736 NA non-coding upstream 318142 4515937 ~ 4521369 (-)
AMCG00006415 NA other downstream 18268 4168050 ~ 4177052 (-)
G109633 NA other downstream 29720 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 37197 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 379803 3730042 ~ 3815517 (-)
AMCG00006390 NA other downstream 466801 3698885 ~ 3728519 (-)
AMCG00006429 NA other upstream 72621 4270416 ~ 4277155 (-)
AMCG00006476 NA other upstream 1379675 5577470 ~ 5603733 (-)
AMCG00006491 NA other upstream 1816309 6014104 ~ 6042924 (-)
G110140 NA other upstream 2587518 6785313 ~ 6785851 (-)
G110195 NA other upstream 2880594 7078389 ~ 7107138 (-)

Expression


Co-expression Network