AMCG00006426


Basic Information

Item Value
gene id AMCG00006426
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4200761 ~ 4217871 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006426
ATGGCTTGGTTTGGCGTGTTCGCGTTGCTCCTGTGGGCAGGTTCGTCCTCGGCACAGTTCGtgttCAGGCGTTCTCCTCaccttgtctgtctgtctttatttaaaaataaatcaatagggAAAGATGAAACAAAGAccctgttccatggccaggacCTGTACATCCCCATGACAGAGATCGAGACCCAGGAGTCCTGGTTCCTGCCTAAGTCCCCCCTGATAGACAGGCGGCGTCTGATGAGTCCGGGCCGTGATCTGGATCCCCGCTGTCACCTGTTGTCCAACTTCCTGATTCTGGAGAAGGTCTCGGTGAAGGACCAGGGCCTGTACACAGTGGTGGAGCTGAACTCTACGGAGTACATCCACAACATCACACTGATCGTGAGAGCACCATCTAAAGCACCATCTGACCTGCAGCCCctgcttttgttgtttgttcttgtcgttgttgctgctgctggaccAGACTGTGTAACAGAGCACATCCTGAAGTACGGAGACACCCTGAACATCCCACTGAGCCAGGAGTCCAGCGCAGTGCAGCTGGAGTTCACTCCAGAGGTGGTGCGGCCCCAGGCCCAACCCCAGCCCCAGCCCGAGACCCAGCCCGAGACCCAGACGGAGACCCAGCCCGAGGCCCAGCCCGAGGCCCAGCCCGAGGCACAGCCCCGGCTCCTGATAAACAACAGTGAGGTGATGGAACCCCAGTACCAGCAGAGGCTGGTGATGCAGGGGCATCGCTGGGCACTGCACAGGGTGACGCCGGCTGATGAAGGGGCCTACACGGTGTGGGACACAAAGGGCAATGCCGTGCAGAAGATGTGCCTGAATGTGAAAGAGCATATAATGTTCGTGGAGCTGGCGTACGGTGGCACCCTGAAGATCAACCTCATCCTGGACAAGGCGTCCGTGACGCTGTCCTTCCTCTCGGACAGGGACAAGACAGAGCGGGTGCTGCTGAAGGAGGGGGTGGTCAGCGACCCACAGTACAACACTCGCCTGCATGTGGACGGTAAGCTGTGCACCCTGGACAGCGTCACCACGGCCGACACCGGCTTCTACACAGTGAAGGACCTGACGGGAACGCTCATCTCCAACGTCCACCTTGAAGTGGAAGCCTACAAGCTGCCGTCGCTGTACGTGGCGATCATCTCCTTGCTCCTGCTGGTGCTgttcctgctgtgtgtgtgtctggtgtcCTGCATGAAAAAGATCAAGCAGCGGGCGGAGAAGGCCCGAGCCATCGCCAAGATCACCCAGCAGGCGGACAAGAGCGAGGGAGAGGCATTCAGACAGGTGGTCCACGAAGCGTACAACCGGTTCACGGAGGACGCCACTACGCAGTCCGTGTCGCAGTGGGATGACAAACCATCGTACACAGACGTGACTGAAGAGGAGGGGAAGGCCCCCGAGGTCTCCAAAGGAAGCCGTTACCACACGCTGCCCGACGAGAAGAACTTTCTGGAGAACACCGATCAGGCTGCGGCAGAGTTTGTCATCGCCGCCCTGCCCCTTGACAGTGACACGGACCACCCCATCGCCTCCACGTCGGAGAAACTCATCCTAGACTCCAAAGACTCTTAGGGTCTAGCGTTTTACTtcccttctttttttcctttctattttttttttttaaatctgcgTTAAAGCCAACAGTACAACTCACAATGCAGGCAGGATCCTATTCAGgattttttctaaaaaaaaagcaaaaaaatctCTCAACAAATACATCTTTGATACCTGTGTCTTAGATTTGGTAATACAAAAAGGGAGTTCATTACAGGGTACAGGACTTCATGGTCCCAGAGACAGGAAATTCAAAGGCTTTATACATTCATATCTATGACAGGGTGATAGAAACAAAATCCATTCAGCATATCATCCACATTTCAGATCAGGCTCCCTTTGCTATACTAGTATTCAAGTTTTGAGTAGTGCAGTGGTGACGTCACACAGCGATGTCTATCCAGTATTTATCCCGTCAAAAtaagttttttaaatgaatacagccCTCgacatattttcagttttcatccCCTTTCAGACACGTTGCCAGCGTTTATGCTTGACAGATGCGCTGTACGCAATTCTACGCACAGCAGAAAAAAGTGGAAGGAAGGTTACTTGGTacactgtcattttattttctgtgacgTCCTACAGATAACTCTGCGCGGTCACTTTTAGGCTAGGGCAGCAGGCTGGTGGTTGACGGCTTTAACACTCTCGCGTCGCTGGTGATGAGAAGTCCCAAAATTGAGTCCCCTCCCAAATCGTAGGGGAAAACTTGTACCCAGCCAATGCAGCTCTCTGTGTGGCCCCGGggtgtaaatatgtaaatacgtCAGAATGACAAACTGCATCGTCATTTTAACTGCGAACTTAAGATGAATACTACTAGTATGGaataattcatgtttattatttatttattatttttactgacATGCCAATTTCAATGAgggtaaaaatatattacttcaCATTTGGATCGTGATGGCTCTTTGTATTagttaaagtatttatttatttagctaaGAATACAAGAGACCATATGAAAAACGTCATCAGAGGGGTTACAGCTCCAGCATGTTCTGATTTTACTTCCTGCTCAGTTCTTATAAGATGATAAGATGAAGAACAGACGAGGTCTTTGCCAAAACCATCCCTTCAatgtcacacatttttaatagttCGCTTGATTGAAACCCCACCAATCTGCCTCCTGAGAAGGAAAACTACAGAGAACCGAGGGTTTGTTCACAAACCGCACCTGCCTGCCAGGAAGAGCATGAATCGTGTTTGatttcataacattttcaacaattcGTTTGTCATCGTATGATCACATTTCAGATGTAACACTTGCCACTTCAGTTGAGCATTTCATATCATACCAAAACTAATACTTATAATacattagcaaaaaaaaaatgtagctgcAATGTTAGTTCTATGCAAGCATCCCCTCTGGGTCATTTTAACTTCTCatttcttctggaaggttcagGTAACCAGCAGTTTCTAATCATCCCCTAATACATGCCCACAAAGTGCAGAGAAATTAGATCCTGGCTATACTTTTTGATGGGGGGGGAAGGACTCAAAGTAAAGATCCACAGTCTCTTGGATTTTATGGCCAATTATTTCCCCCTGATTCACCATGTCTCAATGTTTACCCCACACCATTCTGAAGATGTGTGTTCCCAGCAGGCCTTTGCTTGTAAGGTATTTGGACTGATGGTTATGGTGGTCCGACATCGTTCTACCCTTTGTCTGAATCAATGGCACTAGTCGGCGATTAATTTATATCAATCATTCACTGGACTCGCCTTGAAGGCCACACAACTTTTGTCAATGATGTGTTTTTAAGAGTTAGCTCCGCCTAAAGGAGAACTGTGGATCAAATTGAATTGAGGCGGGATTGGTGAAAGCTTTGACCGACACTCCATGGGTTTCTGCGCAGTGGCATTAGTCGAGGACCTCTGCTGTCTTATCTCATTTTAGTCAACTGGGATTGTTACTGTTTTGTCCAGGTTGAATGAACATGTTTCAAAAGAAGGGTGTCAATACCTTCCACTTCAATAGTGTATAAAAGCAGTGGCACCTCTTTTTTTAAGCATGATGGGAACGTGTTAATAGTCATGCGGGGCTCTTGGAAACTCTGCCCTTCATAATGACATTTAACCGCAAACAGACGTTCCCCCATACTGAGGTACAAGCGATACGTTTGTGATGAGGttgccaatttatttattttttaggagaGGGGGGGTGTTTTGATGTTTTCTCTGCACTCCAAAACAAGCCACTGCCACAGTATTTGTAACAAAGACTTAAAGAGCAATACTTTGCAGTGTTTACACGTTTGaccttttaaaaatgcacacacacacatacaagttCACCTGCTCACTCACACAGACCCAATACTGGAGATCGGTTATTATAATTAACTCGATATGAACCACAGTGATAGGGTCACTCTGCAGGGCTCTGTGATTCTAGCGTGGTGAGACACCTGAGCAGGATCTCCGATTTGCCACAAAACATAAAGCACTGCATGTGTAATTAGAGAGAAGTCTGactgaattaatattttcactgtatAGCCAACAGTTATGGCCATTAAATGAGTTATGAGATATGATGCTCCTTGATcagttgcatttcacaatttgatGTGAATTTCCCCCTTCATTTCTCCTTGCAAGGGGTTCCTTGACTGTAAAGTCAATACTCTTActttgattaaacaaaaatggcCGTATTTCATACCCAAGTTGGTCAATGCTTAAACTGTTGTTTGCAACCCATTTTGCACTGATTACTGTCCTGTTAGGGGGACTTTATAAGCGGCGCCCATCTCACAGTCGTGCCACAGCTATGGAGCCCCGGTGGCTGTTGTGACAACTTTATTAACTGTACATATTGCATGTCTATCCTATGCATTTGATTATGCATTTGTGAATGTTCCTTATATGCCGAAGAGACATATTTGTAGTATACTAGCAAATAACTTTACAAAGGGCATTATATAACCTCCTCCTGCCCCCACCGCCCACAAGCTCACCCCCTTGCTTCTGATCCCTGCACCCCCCTGGTCAGACTGGAAAGATACAATTCTCCCATTGTGCTGGTTTCACAGTGAAAGAGCTTTACACCTTTAGGGAGGAATGACAGCCAGTGCTGAGATTATCAACGGCTCCCGGGCGTTGAACCCTGTCACTTCCACCAAAGCGCTCCACCCCttcctacccccccccccccttccccagaaagcaaataaatacatttcttagaaAACCCCCCTTCGCATGCTTTGAACTTGAAACCCAACAGGTATTATTTGAAATGGCAAGAGAGCTGTTAATCACTGCTCAATCGCATGGTGCAGCTGGCGCACTGTTAGGCTCAGTGTCAGGCTGTGCAGTTTCTCCACCCTCAGTCGGTGACTTTGAGACAGTATTGTCCGACAATCTGAGTTGAGCCTTGCCTTGTTTCGCACACAGACTCTTGTTGGAAATGATCACTCGGTATCTGCTACTGGATACTGTTAGCACGAACCAGCCAGTGTCACATAGTAAATATTCCCCACCTTTGGAAACTTCCTGTCTTCGTGAAAGTTTGCCACAAATTTGCATGGAAATGTGGCAGATTCCCCAGTATTTTCCCAGGGTTGAACTTTCTGTTGCATGGAGTTTCCGTGGTGTGTATCATGGTCTAGTCAGCTATTATTTCCTGTTTCACTATGATttctaataaacaaataaacgtTTCTCTGTTAATGCGAATGTCACTTGTAGTAGATCCACATAAACAAGAAATACTAGCCTGCGAACAATCTACCACCTATCGATGGCGTAAAACCAATTACATTCACGTATGTGTCTTTACTTACATTGCTGTGAAAAGCTCTTCAAATAAAAGGGGCCCTGAAATCAAATCCACAAGCCCAAACCATTTAACAACACGGAGATAAAACACTCAGGAAGAGACGGTTCAAACTTAACTGGGGGGTGGATACTGACCATGTGCCAGGAAGTGTCAGGGGGGAACATTAATCACGTGACACCAGCACGAGTTGGACGACAGGGAGGTGGCATTGCAGCCTGTTGTCTGTCTGCGATGGTGCTAAAGCTCCCATTCAACTCTGGCACTTTGCACTCTGCAGAAAGTTTCCTTAGTTACATCTTCATATATATCACTGCTCCCTCGTCCCTGCTCTTAAAATGCTACACCAATAAGGAAGAGAATGTTATTTTGATAATGCTACATAGACATAATAggtcaatttaatattttattattattactatgttgttatttataataataataataatcatacatgaTATGTACAGTCCATCCCTATGGAAAGGTGTTCATTGCAGAGAACAAAAAGCATGCTTATTTTCCTCttgatctttaaaaatatgttgcaTTCAGTCAGTGTTTATGGACGCTACGTTCCTACAAGCGACACATGGTATTAGTTTGTTTGAAAACACAGACAAGATATgtcttataaaatgtaaaaagactGTAAATAAGCTTTGATGATCTGGGGGAAAAAGCGCCTGATTCCAGTGGAAAGTGTCTGAATTACGCTGGTGTGATCGTCAATGTCTGTATCGAAGTGAAGAAAAGCACACTGCAGTCCCAATGTTTCTGATAAAGGTAGTTTACAGTTTTCATGACAAGTAATAAGAACGTAAGGACTTCAGACAGACAAGGGGAGGCCTCACCCCCATCTAGCTGTTTCATGGGTCTCTTTCAATGACACAGCTGTGTTATTTGTTCCACAATCCCACAACCCACAGTGTAAAGCAGGACTTCACATTTTCAGTCTTAAAAGCACTCTTTGTTTGCACCAGTATCCTcttgtctgtgtgtcactgtccaagTCATGAGAATTTCCAGCACATTCTTGTGAAAGGACATTGATTGTAGTGTGGGACCCTTCGTGAGATTTCAGAGAATTGCTAAGTGCCAAGTGTGCTTTCTCCATTCAGAGAATAGTGTTTGTTCGATCAAATATCACACAAGGTCCTGATAGCTGACTCTGCCTGAGTTGGGCTGGGTAGGTGTTAAGAAATTTTAGAAATCAGTCACTTTAAACTGAAATAGGCCCAGGTTTTCATAACTTTCTGCCAAAGTAGCAAAGTAAATTGTGCCTCCGAAAATATACGATCCCTTAACTCTGTGTtctgatatttttaatatttcaaaggtTGTGGTTGTTAAAAGCTATTCACCTTCAGTGTCATTAACTGATCATTATAGGTGTTTGTGATGAGAATTTCATACCAAATCGTGGATCCAAAACCTGCTTCTAAAAGTCATGTGAATGGCAAGTGGTCCAAATTTGTTCCAAGGAGGGCACTGAAAATAGTTTCCCTGGGCTGTGAATATAAGTGTTGTTCACAACCTCCCTTGATCTGAAAATGAGAACAAACAGACCTGGGTTCTTCTGAATACGGACTTTGATACACTTTGCCAGGATAGCCTTAACAGTGATAGGCAAAATGATGAATGATTGAACATTGTAGTGCTTGGTTAGCCCACCGCAAAACGAGAGGAAAGTCAGTTACCAGCACCTTGCGACTCTGCAGACATGCAAGTCAAGGGAAACGAGGAGTGTATGATATGAGGAGCTTTTTTCACCGAGGAGGGCGTTTGATTAGTTCGAAGATCCAGTCTCTAAGACCAGGGTACGAGCTCGTGGGAATTCACCTTTTGTCTTTTGCACTGACTTCTGCATACTCTATACCATGTGCACCTGCCATCGTCTTTTAAATTTTTTCTGaatgaattcaataaaaaaatcatgataaaataaaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006426 True 7351 mRNA 0.45 8 4200761 4217871

Neighbor

gene id symbol gene type direction distance location
AMCG00006425 NA coding downstream 2966 4195320 ~ 4197795 (-)
AMCG00006431 NA coding downstream 7611 4189849 ~ 4193150 (-)
AMCG00006421 NA coding downstream 59127 4134610 ~ 4141634 (-)
AMCG00006422 NA coding downstream 68014 4131968 ~ 4132747 (-)
AMCG00006418 NA coding downstream 69904 4125812 ~ 4130857 (-)
AMCG00006430 NA coding upstream 4207 4222078 ~ 4230525 (-)
AMCG00006427 NA coding upstream 15793 4233664 ~ 4242559 (-)
AMCG00006428 NA coding upstream 27314 4245185 ~ 4251723 (-)
AMCG00006435 NA coding upstream 96851 4314722 ~ 4330918 (-)
AMCG00006437 zgc:153426,LOC107393497,LOC106534675,LOC100712088,LOC102780606,LOC103367161,LOC107711200 coding upstream 117801 4335672 ~ 4336182 (-)
G109635 NA non-coding downstream 33522 4166951 ~ 4167239 (-)
G109634 NA non-coding downstream 34172 4166328 ~ 4166589 (-)
G109632 NA non-coding downstream 36204 4163982 ~ 4164557 (-)
G109628 NA non-coding downstream 61492 4139034 ~ 4139269 (-)
G109619 NA non-coding downstream 117309 4081807 ~ 4083452 (-)
G109616 NA non-coding upstream 48956 4266827 ~ 4268470 (-)
G109689 NA non-coding upstream 90302 4308173 ~ 4311951 (-)
G109692 NA non-coding upstream 126516 4344387 ~ 4349812 (-)
G109735 NA non-coding upstream 296439 4514310 ~ 4515575 (-)
G109736 NA non-coding upstream 298066 4515937 ~ 4521369 (-)
AMCG00006415 NA other downstream 23709 4168050 ~ 4177052 (-)
G109633 NA other downstream 35161 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 42638 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 385244 3730042 ~ 3815517 (-)
AMCG00006390 NA other downstream 472242 3698885 ~ 3728519 (-)
AMCG00006429 NA other upstream 52545 4270416 ~ 4277155 (-)
AMCG00006476 NA other upstream 1359599 5577470 ~ 5603733 (-)
AMCG00006491 NA other upstream 1796233 6014104 ~ 6042924 (-)
G110140 NA other upstream 2567442 6785313 ~ 6785851 (-)
G110195 NA other upstream 2860518 7078389 ~ 7107138 (-)

Expression


Co-expression Network