AMCG00006428


Basic Information

Item Value
gene id AMCG00006428
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4245185 ~ 4251723 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006428
CCGGGAGAGAAATAAACAGCGGCGGCGGTGCAGTGATGGAGACACGGACAGCCGCCTGTAGACACGCCGGGCTGGACATGAGAGCCGCAGCGTGTTATTCAGCCCACACGACCGCCCGGACGAGCGGCCTCTTCTCTAGCCATGACTGAGCGGAGCTACGCAGAAATATAGAAGCGCGGGCAGCGGGGCAGACATGTACGCCGTGGTGGAGTTCACAGACACGCGGGAGGTGGAGGTGATTCCCGCGGCGTGGCTGGTAGACGACTCGCACTGTTTCTGGCCGCCCTTCCGCTCGGCCGTCAGGGCGGTGCAGACGCTGATGCTGCCCGACTCCGCCTGGATGCTGTACGCGGTCAGGGTCCTTCACAAGACGGATTCCTATGCCAGGGCCAAGTCACAACTGAATCACTACAGTTCCTCCCCCGATCGGGCAGTGACAGCGGAGAACCACACAGCCAAGGAAAAGACCTCCACGTCGGCCTCGGAGCTCGAGGAAGAGGAGCACTCTTCCTTGTGGGAGTACCCGGACACCCCCTCGCCCAGTCAGGGAAAGCCAGTCTTAGGGGGCCCCCTCCCCGCCGTGGGCCAGACTGTCTCCCCCCAGCAGTACAGCTCAGCCCTGCAGGCTGCTACACCGGCTGATGGGCTACTAACAGCCTTCGAGAGGAAGGTGCTGTGGAGTCTGGAGGAGATCCGGATGCAGGTGGCCCAGAACGGCAGGCTGCTGTCGGAGCTGCTGGCCCGGGGTGGCGACGGGGACGAGCTGCTGCTGGCCGAGAACCTGGGCTTTCCCCTGGGCAGCATGGAGGCCGTGGACCGGCTGGAGGACAGGCTGGTGGACGAGGCCTTCGGGAACGCATTGgtGTTCAGTCTCTCGGCGATCGGGGGCGCTGACGTGAAGAGCGCGGTGGGGAGAATGATGGGGGCGGTGCTGCAGAACTGCCTGGCCTCTCAGTTTAACTGGGTGGGGAAGGGAGGGCAGAAGAGAGCCTTCAAGGACCTGCGGCTGAGGAAGATCATGTTCAGAGCCGTGCGAAGAAACGGTCCCACGAGAGAGACCTCGGAGGACGAGTTCACATCGGTCGCCATGAACTGGCTGCGATATGCCAAGGATCGGGGCGGGGGGCGGAGGAGGCGGGCAGAAGCGGCGGCAGCCAAAAATCAAGAGGAATCCGGCACAGACTATCAGCCCGAGCACAGCTCTTGATCACACAGAACCAGGTCGGGTCCAAATGCCTTGACAGAGACTTTTAAATGGAAAGGAATAGCCCTTGTACTGACAGCGTTCCTGTCACACATGGAGTGGATTTCTACACTTGAGTGTTCCTCTTTAATTGGAATTGTCCAggttatacaaatatatatttacaaatacactGTTTCATCACCAGTGTGGTTTCCAACAggaattcattaattcattcggGATGTCCAGATGGCTGTGATGTCATTGGGCCCCTGTATCTATGTAAGAACATAAAGTATACAatccagaggaggccattcgccccattgtgctcgtttggtgtccattaataactaagtgatccaaggatcctatccagtctgtttttcaatgtcgcaaattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtttgaagaagtgtctcctgttttctgtcttgaatgccttcaagctcaatttccatttatgtccccGGATGCGTGTGTCCcggctgatctggaaaagctcctctggtttgatgcctttcatgattttgaagacttgaatcgaatctctgttccaaggtgaaaaggttcagtccctcagtctctcagtaggacattcccttcagacctggaataagtctggtttctctcctctgaactgcctctagagcagcgatatctttcttgaagtctGAAGCCCAGagctgtccacagtatccagatgagctctaactagtgcattggaCAGTCTTAGTGTGTTGGTGATCTGACAGCTCTTGCTATTTAAACACCAGTTGTGACTTGTAATAAGACTGTTTAAGACCTATGAAGAGACTCCTGAAAAAGCACATAGTGAGCCCTAAGAGCTGAGGTTCACCGGTTTGATCCAGCTCATGTCATAAGCCGATTGTGACTAGGAGCGCTCAGTGGTGGTGCACGATTGGCTCAGTACCGCCCGGATTAGGGAGGGTTAAATGGGCAGGGCTTGTCTCAGCATGTCAATAACGAACGTCTCCTGCCGGCTTCCTGGGCACCAGCAGTACCACTGGGAGGGATGAGCTTCACCTCCAATCGACACTGAACGCTTCATGGTGCAAAGAGACTGGTGGCTCAAGGACGGCCAGGTCACGCTTACTCACCCTCCCCACATGAAGTTGTGGAATTTGTAAGCCAAGATGCATTAGTATGGTCAGTAATTCCAAAAATtagaggggggagaaaaactcaaaataattggtgattccaataaaataaaaataaaaacatgagagaAGCTAGTTGAAAATCAGTTCTCAGAGGGGCCAGCATAAGATTGATTGTCTCAGCTGGTAACGATGACACTGAGAGGCAGGGCCCTGGTGATGTCACAGTATGGCACAAATGGCCACCTACATGAACTTGTAGCCAGTGTGACATCCAAGTGCTGATGTCATTATCAAACAAGTCGTGGGCCGGGTTCTGGCTCCAGTTtgggaaataaaacacaagcacctgactgcttttattttaaa

Function

GO:

id name namespace
GO:0051301 cell division biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006428 True 2727 mRNA 0.53 7 4245185 4251723

Neighbor

gene id symbol gene type direction distance location
AMCG00006427 NA coding downstream 2626 4233664 ~ 4242559 (-)
AMCG00006430 NA coding downstream 14660 4222078 ~ 4230525 (-)
AMCG00006426 NA coding downstream 27314 4200761 ~ 4217871 (-)
AMCG00006425 NA coding downstream 47390 4195320 ~ 4197795 (-)
AMCG00006431 NA coding downstream 52035 4189849 ~ 4193150 (-)
AMCG00006435 NA coding upstream 62999 4314722 ~ 4330918 (-)
AMCG00006437 zgc:153426,LOC107393497,LOC106534675,LOC100712088,LOC102780606,LOC103367161,LOC107711200 coding upstream 83949 4335672 ~ 4336182 (-)
AMCG00006434 NA coding upstream 115527 4367250 ~ 4368596 (-)
AMCG00006436 NA coding upstream 124958 4376681 ~ 4387311 (-)
AMCG00006440 NA coding upstream 169306 4421029 ~ 4430984 (-)
G109635 NA non-coding downstream 77946 4166951 ~ 4167239 (-)
G109634 NA non-coding downstream 78596 4166328 ~ 4166589 (-)
G109632 NA non-coding downstream 80628 4163982 ~ 4164557 (-)
G109628 NA non-coding downstream 105916 4139034 ~ 4139269 (-)
G109619 NA non-coding downstream 161733 4081807 ~ 4083452 (-)
G109616 NA non-coding upstream 15104 4266827 ~ 4268470 (-)
G109689 NA non-coding upstream 56450 4308173 ~ 4311951 (-)
G109692 NA non-coding upstream 92664 4344387 ~ 4349812 (-)
G109735 NA non-coding upstream 262587 4514310 ~ 4515575 (-)
G109736 NA non-coding upstream 264214 4515937 ~ 4521369 (-)
AMCG00006415 NA other downstream 68133 4168050 ~ 4177052 (-)
G109633 NA other downstream 79585 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 87062 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 429668 3730042 ~ 3815517 (-)
AMCG00006390 NA other downstream 516666 3698885 ~ 3728519 (-)
AMCG00006429 NA other upstream 18693 4270416 ~ 4277155 (-)
AMCG00006476 NA other upstream 1325747 5577470 ~ 5603733 (-)
AMCG00006491 NA other upstream 1762381 6014104 ~ 6042924 (-)
G110140 NA other upstream 2533590 6785313 ~ 6785851 (-)
G110195 NA other upstream 2826666 7078389 ~ 7107138 (-)

Expression


Co-expression Network