Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006429 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 4270416 ~ 4277155 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006429 | True | 849 | mRNA | 0.56 | 7 | 4270416 | 4277155 |
| TU137298 | False | 251 | lncRNA | 0.57 | 4 | 4275329 | 4276386 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006428 | NA | coding | downstream | 18693 | 4245185 ~ 4251723 (-) |
| AMCG00006427 | NA | coding | downstream | 27857 | 4233664 ~ 4242559 (-) |
| AMCG00006430 | NA | coding | downstream | 39891 | 4222078 ~ 4230525 (-) |
| AMCG00006426 | NA | coding | downstream | 52545 | 4200761 ~ 4217871 (-) |
| AMCG00006425 | NA | coding | downstream | 72621 | 4195320 ~ 4197795 (-) |
| AMCG00006435 | NA | coding | upstream | 37567 | 4314722 ~ 4330918 (-) |
| AMCG00006437 | zgc:153426,LOC107393497,LOC106534675,LOC100712088,LOC102780606,LOC103367161,LOC107711200 | coding | upstream | 58517 | 4335672 ~ 4336182 (-) |
| AMCG00006434 | NA | coding | upstream | 90095 | 4367250 ~ 4368596 (-) |
| AMCG00006436 | NA | coding | upstream | 99526 | 4376681 ~ 4387311 (-) |
| AMCG00006440 | NA | coding | upstream | 143874 | 4421029 ~ 4430984 (-) |
| G109616 | NA | non-coding | downstream | 1946 | 4266827 ~ 4268470 (-) |
| G109635 | NA | non-coding | downstream | 103177 | 4166951 ~ 4167239 (-) |
| G109634 | NA | non-coding | downstream | 103827 | 4166328 ~ 4166589 (-) |
| G109632 | NA | non-coding | downstream | 105859 | 4163982 ~ 4164557 (-) |
| G109628 | NA | non-coding | downstream | 131147 | 4139034 ~ 4139269 (-) |
| G109689 | NA | non-coding | upstream | 31018 | 4308173 ~ 4311951 (-) |
| G109692 | NA | non-coding | upstream | 67232 | 4344387 ~ 4349812 (-) |
| G109735 | NA | non-coding | upstream | 237155 | 4514310 ~ 4515575 (-) |
| G109736 | NA | non-coding | upstream | 238782 | 4515937 ~ 4521369 (-) |
| G109761 | NA | non-coding | upstream | 469815 | 4746970 ~ 4747234 (-) |
| AMCG00006415 | NA | other | downstream | 93364 | 4168050 ~ 4177052 (-) |
| G109633 | NA | other | downstream | 104816 | 4164934 ~ 4165600 (-) |
| AMCG00006414 | NA | other | downstream | 112293 | 4152816 ~ 4158123 (-) |
| AMCG00006398 | NA | other | downstream | 454899 | 3730042 ~ 3815517 (-) |
| AMCG00006390 | NA | other | downstream | 541897 | 3698885 ~ 3728519 (-) |
| AMCG00006476 | NA | other | upstream | 1300315 | 5577470 ~ 5603733 (-) |
| AMCG00006491 | NA | other | upstream | 1736949 | 6014104 ~ 6042924 (-) |
| G110140 | NA | other | upstream | 2508158 | 6785313 ~ 6785851 (-) |
| G110195 | NA | other | upstream | 2801234 | 7078389 ~ 7107138 (-) |
| G110507 | NA | other | upstream | 4445233 | 8722388 ~ 8724352 (-) |
