Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006453 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 4921018 ~ 4926780 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K11109 | POT1; protection of telomeres protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006453 | True | 777 | mRNA | 0.59 | 5 | 4921018 | 4926780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006451 | grm8 | coding | upstream | 214581 | 4699666 ~ 4706437 (+) |
| AMCG00006449 | LOC105007228,LOC106561032,LOC107584025 | coding | upstream | 242682 | 4663502 ~ 4678336 (+) |
| AMCG00006450 | LOC107389496,LOC106561032 | coding | upstream | 288022 | 4615192 ~ 4632996 (+) |
| AMCG00006443 | grm8,grm8a,LOC108412277 | coding | upstream | 349503 | 4570524 ~ 4571515 (+) |
| AMCG00006442 | NA | coding | upstream | 358943 | 4542112 ~ 4562075 (+) |
| AMCG00006454 | NA | coding | downstream | 63 | 4926843 ~ 4930909 (+) |
| AMCG00006452 | NA | coding | downstream | 34426 | 4961206 ~ 4968033 (+) |
| AMCG00006455 | NA | coding | downstream | 88866 | 5015646 ~ 5016686 (+) |
| AMCG00006461 | NA | coding | downstream | 152970 | 5079750 ~ 5090677 (+) |
| AMCG00006458 | NA | coding | downstream | 212762 | 5139542 ~ 5149792 (+) |
| G109721 | NA | non-coding | upstream | 399769 | 4518917 ~ 4521249 (+) |
| G109713 | NA | non-coding | upstream | 448010 | 4468391 ~ 4473008 (+) |
| G109655 | NA | non-coding | upstream | 543641 | 4374148 ~ 4377377 (+) |
| G109662 | tubb,LOC108432309 | non-coding | upstream | 585568 | 4334323 ~ 4335450 (+) |
| G109660 | NA | non-coding | upstream | 591740 | 4328869 ~ 4329278 (+) |
| G109779 | NA | non-coding | downstream | 91309 | 5018089 ~ 5020403 (+) |
| G109780 | NA | non-coding | downstream | 94516 | 5021296 ~ 5022178 (+) |
| G109786 | NA | non-coding | downstream | 117636 | 5044416 ~ 5044633 (+) |
| G109837 | NA | non-coding | downstream | 425676 | 5352456 ~ 5353170 (+) |
| G109933 | NA | non-coding | downstream | 619427 | 5546207 ~ 5546436 (+) |
| AMCG00006445 | NA | other | upstream | 393280 | 4524806 ~ 4527738 (+) |
| G109714 | NA | other | upstream | 443448 | 4476934 ~ 4477570 (+) |
| AMCG00006413 | NA | other | upstream | 753066 | 4159523 ~ 4167952 (+) |
| G109570 | NA | other | upstream | 765269 | 4152816 ~ 4155749 (+) |
| G109538 | NA | other | upstream | 957022 | 3963597 ~ 3963996 (+) |
| G109781 | NA | other | downstream | 98115 | 5024895 ~ 5025906 (+) |
| G109795 | wasl,wasla,LOC105018628 | other | downstream | 154101 | 5080881 ~ 5098698 (+) |
| AMCG00006460 | wasl,wasla,LOC107698525 | other | downstream | 167491 | 5094271 ~ 5107022 (+) |
| AMCG00006459 | NA | other | downstream | 200577 | 5127357 ~ 5134715 (+) |
| G110023 | NA | other | downstream | 1052282 | 5979062 ~ 5982909 (+) |
