AMCG00006457


Basic Information

Item Value
gene id AMCG00006457
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5017795 ~ 5051191 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006457
ATGACTAGAACGATGAGAGGAAGGACCCCCAACGCCGCATCTCTCCATGCTACTCCTCTTGCTTGTGCTCTGACCTGCTCCTGGGCGCTGGTCCTCATCAACTCCGCCCTGGCCCTGAAACCTGCCAAACTACCCCTAATAGGAAGGAAACCTTTCATCGCCGCCTGGAACGCCCCTCTGGACCTCTGCACCATGAAGTACAACGTCAGCGCCGACCTCAGCATGTTCCATATCGATGGCAGCCCGAGAGCGACGCGAACTGGGCAGAACGTGACCATATTTTACGCCAACCGTCTGGGACACTACCCCTTCTACACGGAGCAGGGCGCGCCGGTGAACGGGGGTCTCCCGCAGAACTGCAGCTTGGACTCGCACCTGCAGAAGGCCGATAGGGACATCCGCTTCTACATCCCCTCGGAGAACTTTAGTGGCCTGGCCATCATAGACTGGGAGTACTGGAGGCCGCAGTGGACGCGTAACTGGCACAAGAAGGACATCTATCGGAGGAAGTCCCGGGAGCTGATCTCCAGCGCGTATGTCAACGTCTCCGCTGAGCAGGTGGAGGACCTGGCGAGAGACAGATTCGAGAGGAGCGCCAGGGCTTTCATGAAGAGGACCGTCCAGCTCGGGGTACAGAGTAGACCCAATGGACTGTGGGGCTACTACCTGTACCCCGACTGCCACAACTACAACCTCCACGAGCACAACTACTCCGGCTCCTGCCCGGTGTTGGAGAGCCTGAGGAATGATGAGCTCTTCTGGCTGTGGAACAGCAGCACGGCCCTGTTCCCCTCCGTGGCCATAAAGAAGTCCCATGCGGACAGCATCAGCAACCTGCACTTCTCCCAGTTCCGGGTCCTCGAGTCACTCCGGATCGCGTCCATGACATCCTTGGATTTCGACTTGCCCACCTTTGTCTACACTCGGCTTGGGTACCGGGATGAAGCGCTGTCGTTTCTCTCAATGAAAGACCTGATTCACACCATTGGAGAGAGCGCTGCGCTGGGAGCCGCAGGGTTCGTAATCTGGGGAGACATGAACCTCACCTCCTCCAGGCACAACTGCTCCAAGGTGAAGTCGTTCCTGAGCCACACACTGGGCCGCTACATCACCAACGTGACGCGGGCTGCCGAGGTGTGCAGCGACTTCCTGTGCCAGAGCAACGGCCGCTGTGTGCGGAGGGACTGGCAGGCGCCGCACTACCTGCACCTGAGCGCCGACAGCTACCGCATCCAGTCCTCCGAGGAGGGGGGGGCGCTCAAGGTCACCGGGTGGCACTCAGAGCAAGAGCTGGCCGAACTGCAGGCCAGGTTCACCTGCCACTGCTACCAGGGGTACGAAGGGGACAAATGCGACAGCCCTGAGGAGACACAGGCGCCCGACAGCACTGCAGGCCGACCTCTGACTCCCCTCACACTggtcctgttgttgttgTTCCATAGAAGAAGAAAGATGGAACTGTTCACCCGTATCAGAAAGAAGACCCCACCTCTATCCGCGCTCCTCTTTGTCACTCTGCTAGAGAACCTGTACTTCTCTCATGGTCTGCCTCCGACAGCCAGCCCTCTGTTTGACGGGCGTCCGTTTGTGGTCGTGTGGAACGCACCGACCCCTGCTTGTAAAGCAAACAAGATCACCTTAGATTTGGCAGCGTTCGCAGCTGTGACCACCCCAGGGGACGATCCAGGCCAGGACCTCACCCTTTTCTATCATAACAGACTGGGGCTATACCCATATGTCAATGAGGAAACCAAGCAAGAATTCTATGGGGGGATCCCTCAACAGGCCAACATGGCAGCTCACTTGAAACATGCCCAGGAGGACACAGCCCACTACATTCCCTCCGAAACGGCCACTGGTTTAGCTGTCATCGACTGGGAGTCGTGGAGACCACTGTGGCTCAGGAACTGGGGCTCGAAACAGATATATAAGACCCTGTCTGTCGCTTACGCCAAGAAACTGGACCCTTCCCTGTCAGAGCAGCAGGCGACAGAGGTAGCGAAGGCACAGTTTCAAGTGGCCGCGAAGGAGTTCATGGCGAAAACCCTGGAGCAGTGCAGCACACAGCGCCCCAAGCAGCTCTGGGGTTACTACCTGTTCCCCAACTGCTACAATTACGGCTACAATGACGCCAGCAAGGTGTACACAGGCGAATGCTCGGATCTGGTGAAAAGTCGGAATGACGAGTTGCTGTGGCTGTGGCAGGGCAGCAGCGCTCTCTACCCCTCCGTGTACCTGCCTGCCGCTCTCAAGGACACCGACAAGGCAGCCCTGTACGTCCGCAATCGGGTGCAGGAGGCCATGCGAGTGGCGGCGCTACCCAAACGCAGCTCCACCGCCCCCATTTACGCGTTCAATCGGCCGGTCTTCACCGACAAGAACAAAGAGTTTCTGGAAAAGATCGATCTGGTTCACTCTATAGGAGAGAGCGCGGCAGTGGGGGCCTCGGGGGCCATTTTATGGGGGGCGAGTGCAGACTTTAATGACAAGAACACGCTGAGCCCCTACATCGCCAATGTTAGTGCAGCCGCCAAGCTCTGCAGCAGCATGCTCTGTCAGGACAACGGAAGATGTGTCAGGAAGAACTACGACAGCAGCGATTATCTGCAGCTCAATCCTGCCCACTTCCAAGTACAAAGGGGGCCACATGGGAAGTATCTTGCCACTGGATTGGCAAGCGCTGATGACCTGAGTCATTTTGCAAACAAATTCACTTGTCAGTGCTTTGAAGGAAAGAGCTGTCAGGCACGATTGCCAGACAACATTCCTCGAACTGAGATTACTCTGCTCAGCGCATCCTGCTGCATAACATTTACGACAATAACGAGTTTGATCAGCCAGAGAATTGTTTGCTTGCATCATCATCCCAGCACCAAAGCTCATCCTCTTTACAAAAATACCCCCTTTGCTTTTATATTCAATGCACCATCAGATCCCTGTTCAGAAAAGCATGACATTTCGTTAGACCTGAGTCAGTTTTCTGCCGTGAGTTCTCCTGCGGCCAGTGCTATAGACCAGCCTCTCACTCTGTTCTATAACAACAGGCTGGGTCTTTACCCCTTCGTAAATGAACAGACCGCCGAGCTCCACAATGGAGGCATCCCACAGGATGGCAACCTGCAGAGACACCTAGAACAGGCAGCGGAAGACATCAGCTTCCACATCTCCTCGGAGAAGGCCAATGGCTTGGCAGTGATCGACTGGGAAGATTGGAGACCAGTCTGGATGAGGAACTGGGCGAGGAAGATCATTTACCAGAAGCTTTCCTTGGATAGTGGCGAGTTTGAAAGAGCTGCGAGAGAATTCATGAGGGAGACGTTGAAACTGGGGAAGACGTTGAGGCCCAATCAGCGATGGGGCTTCTACTTGTTCCCAAACTGCTACAACCACAGGCACATACTCAACACGAACTACACGGGCCAATGCCCAGAGGCAGAGAGGGCACGCAATGATGGTCTCCACTGGCTCTGGGAAGAAAGCACAGCTCTGTATCCGTCCATCTATTTCCTGGAAGACTTGAAGGATTCGTGGAAGGCCGCACTGTTTGTTCGCCACCGTGTTCTTGAGGCCATGAGAGTGGCTCAGCGGCCAAGACGCTCTGAGCCCATCCCCGTGTACGTGTACAACCGCCCGGTCATCGTTGGTCACACCCAGCAATTCCTGAGCCAGATGGATCTTGTGCATGCGGTTGGGGAGAGCGCTGCTCTGGGCGCTGCAGGAATGGTGTTTTGGGGAGCTTCTGCTGACTTCAGTGATGAGGAGAAATGTTCAGCCATGGGTAAATATTTAGAAGAGATCCTGAATCCTTATCTGGCCAATGTCTCTGCTGCAACCCAGCTGTGCAGCTCCCAGCTGTGTGCGGACAAGGGCAGATGTGTCAGAAAGGACCCGCACTCCAGCCGCTACCTGCACTTAAACCCCACTAACTTCAACATGCAACAAAATGCGGACGGGAAACATGTTGCTGTTGGTTCACCATCTCACACTCCTCGGAGTTCAACCTGCTGCCTTATTCTCTTAACCCTGTTCAACGCTTGCCATGCTCTGCTCCACACCGCACCCCCGTTAGGAGTCAACTTACCTTTCCAATTCATGTGGAACGCACCCACAGAACTGTGCCGCAGCAGATTTGGCCTCCGCCTGCCCCTGGAGCACTTCCAGTTCGTGAGCAGCACACTGAAGGCTTCCACCAACCAGAGCATCACCCTGTTCTACATCGACAGATTCGGCGTCTTCCCCTACATGGACAAAGACACAGGGAAGTCCTACAACGGAGGCATCCCTCAGCTGATTGACTTCAAAGAGCATCTGAGACTGGCCAAGTTGAACATCAGCTTCTACATCCCCTCTGACCATCCGGGCTTCACTGTCCTTGACTTCGAAGAGTGGAGGCCGCAGTGGGCAAGGAACTGGGGCAGCAAGAGCATCTACAAGAGGCACTCCATCGACCTGGTGATCCAGAGCGACCTCAGCTTGAACTTGGTCAAGGCGGAGGAGAAAGCCAAGAAAGACTTCGAGGAGGCAGCCAAGGCTTACTTCAGGGAATCTCTGAAGCTCGGCAAGTCACTGAAGCCCAATCGCCTGTGGGGCTACTACCTGTTCCCGGACTGCTACAACTATGAGTACAGAGACGTCCTGTGGAACTACACAGGAAGGTGCCCCAAGATCGAGCAGGACAGGAACAACCAGCTTCTGTGGCTGTGGCAGGAGTCGGAGGCACTGTACCCCTCGATATATCTGGAGTTGATACTGAAGGACTCCCCGAAAGCTACCATGTATGTCCGTCACCGCATCCAAGAATCCATGAGGGTCTCCATGCTCCCCAATAAAAATTACTCTATCCCCATCTACGCTTATATCCGTCCCGTGTACAAAGACACCCTTTCAGTTTACTTGTCTGAGTATGACCTGGTGAACACCATCGGAGAAGCCGCCGCCTTGGGCTCCGCAGGTGCGATCGCCTGGGGGGACCTGAACGTGTCAGTGAGTGCGTTCTCCTGCAGCGCTGCGAAACAATACCTAGTCAACACCATGAACCCGTACATGCTCAACGTGTCCACGGCCGCCCGGTTCTGCAGCACGGCCCTGTGTGGGGACAATGGGAGATGCTTGAGGAAGAACTGGAACTCCAGTGATTACCTGCACCTGGATCCCAGCAGACACAGCATCGAGAGATACAACGATGGGTCGCTCTCGGTGAAGGGCCAGTTGTCCCAGGAGGATATCGACTGGTTTGAAGACCGGTTCACCTGCATGTGTTACACGGAGGAGCCCTGCGAGTCGACACTGGTTTTGAACACCATTCCAGAGAGACTCTACAACCGAGGTGTTGTCTTTGCACCATCAGTAGAGATTCTTACTTTCCTTCTCTGTGTGGTCCTCCTTGATGGACTGGAGATTTTGAAGCAGTTTCCTTCAGATATCATGCCCCACAAGTTAAATATATCCACATCATCAAGGAACCAGCACAACGCTCAACAATGGAACAGAGTACTTGCAGAGATCACTGTAAGAATGATGTCCGTTCCTTTTTTTCAAGAGAATTGTTATCTGCCAGAGGTTGCCCTAAAGCACTAA

Function

GO: NA

KEGG:

id description
K01197 hya; hyaluronoglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006457 True 5577 mRNA 0.55 14 5017795 5051191

Neighbor

gene id symbol gene type direction distance location
AMCG00006447 NA coding downstream 525265 4484214 ~ 4492530 (-)
AMCG00006448 NA coding downstream 533915 4483234 ~ 4483880 (-)
AMCG00006441 NA coding downstream 541148 4454881 ~ 4476647 (-)
AMCG00006439 NA coding downstream 576361 4439800 ~ 4441434 (-)
AMCG00006440 NA coding downstream 586811 4421029 ~ 4430984 (-)
AMCG00006456 LOC108436892 coding upstream 12270 5063461 ~ 5067740 (-)
AMCG00006463 LOC107726005,LOC107656401,LOC107711505,LOC107581005 coding upstream 59971 5111162 ~ 5114090 (-)
AMCG00006462 NA coding upstream 64525 5115716 ~ 5123628 (-)
AMCG00006470 NA coding upstream 299013 5350204 ~ 5390268 (-)
AMCG00006471 NA coding upstream 385352 5436543 ~ 5483801 (-)
G109778 NA non-coding downstream 46607 4970864 ~ 4971188 (-)
G109761 NA non-coding downstream 270561 4746970 ~ 4747234 (-)
G109736 NA non-coding downstream 496426 4515937 ~ 4521369 (-)
G109735 NA non-coding downstream 502220 4514310 ~ 4515575 (-)
G109692 NA non-coding downstream 667983 4344387 ~ 4349812 (-)
G109815 NA non-coding upstream 85327 5136518 ~ 5136744 (-)
G109875 NA non-coding upstream 294492 5345683 ~ 5347227 (-)
G109878 NA non-coding upstream 358149 5409340 ~ 5409571 (-)
G109916 NA non-coding upstream 383746 5434937 ~ 5435764 (-)
G109995 NA non-coding upstream 751381 5802572 ~ 5803261 (-)
AMCG00006429 NA other downstream 740640 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 840743 4168050 ~ 4177052 (-)
G109633 NA other downstream 852195 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 859672 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 1202278 3730042 ~ 3815517 (-)
AMCG00006476 NA other upstream 526279 5577470 ~ 5603733 (-)
AMCG00006491 NA other upstream 962913 6014104 ~ 6042924 (-)
G110140 NA other upstream 1734122 6785313 ~ 6785851 (-)
G110195 NA other upstream 2027198 7078389 ~ 7107138 (-)
G110507 NA other upstream 3671197 8722388 ~ 8724352 (-)

Expression


Co-expression Network