AMCG00006462


Basic Information

Item Value
gene id AMCG00006462
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5115716 ~ 5123628 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006462
ATGTCTAAAGCGATGGATGCAATAGATGAAATGGATGAAGATGAACTGCTGCAGTATGCAATTCAGCTGAGCATTGAAGAATCAAGCCCACCCAGCACAGCGACACTTAGAGACAGTTCAGACGAAACAAGTGAAGAAAACCAAGTGATCATAGCGGCCATACAGAACGGGGAAGTGTTTACCCTCCAGCAGCTCACAGAATATCAGCCAGCCTTCGCGGAGGCAGACGGGAGAGGATGGCTGCCTGTTCATGTGGCCGCAGTGCAGCCCATCGTCCAGATCCTGGAGATTGTCCTGGATGCTTCCTGCGAAATCAATCTGGAGCAGACGACAGCAGACGGCGAGACGGCTCTGACCCTCGCAGCGAAGGCCGGGCTGGAGGAGAATGTCAGGGCCCTGCTGGACAAGGGCGCGTCCCCGCACACCACCAACTGCAGCAACGAGACTCCGCTTCTGCTCGCCGTGAGAAACGGCTCATACAGAATGGCGGACATCCTCATCAGGAATGGGGCCCTGGTCAACCAGGTCTCTCACAAGAAGTGGACTGCCGTTCACGAGGCGGCCAAGACGGGCCGCAGTGACATCATGACTCTGTTCCTGCACAACGGCGGCTCGGTGTCCCAGAGGAGCAGCCATGGGGTCACTGCCCTGGGAGTCGCCGCAGAGTACGGCCAAAGCGACGTGCTGGAGCTGCTCATTCATAAAGGTGGCGATGTCAATGCTCAGTCTTACAACGGGGAGTCTGTTTTATGCGACGCAGCCGAAGGCGGGAATCCAGACTgtctggagctgctgctggagtACGGAGCCAGTCCCAACCTGCCGTCCAGGAGTGGACTGTTGCCCATACACAGAGCAGCGTACAAAAGTAATTACCTGGCTCTGAAGATCCTCATCCCCATCACGTCCAAGAAGGCCATCCAGGACTGTGGTGTGAGCCCCGTCCACTCTGCGGCGGACGGAGGCAGCAACCAGTGTCTGGAGCTGCTCATCGAGAACGGATTCGACGTCAACTGCCTCCTGAGCCAAACCCTGTCCCAGAAATACAATGACGGCCGGAGGACCCCGCTCTTTTTTGCCGTCTCCAACGGGAACGTGACCTGCACCCAGCTGCTGCTGAAGGCCGGCGCCAAGCCCAACTTAGACCCGCTGAACTGCCTGCTGGTGGCCGTGCGGGCGCTGAATTTCGAGATCGTGCGGATGCTGCTGGAGAGCGGGGCGAACGTGAACTCGTACTTCACCATGATCCACGACACCACCTTCCCCTCGGCCATCCAGTACTGTCTGAAAAACGAGATGATGATGCGCCTGCTGCTGAACAACGGCTTCGATGTCACCAAGTGCTTCCAGTGCAAACACAAGAGACTCGACACCACCGCCCTGCTGATAAGCCACAACCTGGAGAACATCGTGTCCGGGTTTACCAGGTCCGGCACAAAGAACACCCCCGTGAGTAAAACAGATGAGAAAGGACTGGGTCCAGACTGGCCCAAAAACCCACGGCCGCTGAAGCACCTGTGCCGCCTCGCAATACGAAAACTGTTATCGCTGACTCGACTCTGCAGATTGAACTACTCGTCCTCCTTCCCTCTGCCCCCCGTTCTACAGAACTACATCCTGTACAAGGAGTACGACTTATACGGGAGGCGTTTTGGCTCGGCA

Function

GO: NA

KEGG:

id description
K10337 ASB15; ankyrin repeat and SOCS box protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006462 True 1662 mRNA 0.57 9 5115716 5123628

Neighbor

gene id symbol gene type direction distance location
AMCG00006463 LOC107726005,LOC107656401,LOC107711505,LOC107581005 coding downstream 1626 5111162 ~ 5114090 (-)
AMCG00006456 LOC108436892 coding downstream 47976 5063461 ~ 5067740 (-)
AMCG00006457 NA coding downstream 64525 5017795 ~ 5051191 (-)
AMCG00006447 NA coding downstream 623186 4484214 ~ 4492530 (-)
AMCG00006448 NA coding downstream 631836 4483234 ~ 4483880 (-)
AMCG00006470 NA coding upstream 226576 5350204 ~ 5390268 (-)
AMCG00006471 NA coding upstream 312915 5436543 ~ 5483801 (-)
AMCG00006473 NA coding upstream 386961 5510589 ~ 5513330 (-)
AMCG00006474 NA coding upstream 395043 5518671 ~ 5534047 (-)
AMCG00006472 NA coding upstream 427189 5550817 ~ 5551857 (-)
G109782 NA non-coding downstream 95041 5020037 ~ 5020675 (-)
G109778 NA non-coding downstream 144528 4970864 ~ 4971188 (-)
G109761 NA non-coding downstream 368482 4746970 ~ 4747234 (-)
G109736 NA non-coding downstream 594347 4515937 ~ 4521369 (-)
G109735 NA non-coding downstream 600141 4514310 ~ 4515575 (-)
G109815 NA non-coding upstream 12890 5136518 ~ 5136744 (-)
G109875 NA non-coding upstream 222055 5345683 ~ 5347227 (-)
G109878 NA non-coding upstream 285712 5409340 ~ 5409571 (-)
G109916 NA non-coding upstream 311309 5434937 ~ 5435764 (-)
G109995 NA non-coding upstream 678944 5802572 ~ 5803261 (-)
AMCG00006429 NA other downstream 838561 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 938664 4168050 ~ 4177052 (-)
G109633 NA other downstream 950116 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 957593 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 1300199 3730042 ~ 3815517 (-)
AMCG00006476 NA other upstream 453842 5577470 ~ 5603733 (-)
AMCG00006491 NA other upstream 890476 6014104 ~ 6042924 (-)
G110140 NA other upstream 1661685 6785313 ~ 6785851 (-)
G110195 NA other upstream 1954761 7078389 ~ 7107138 (-)
G110507 NA other upstream 3598760 8722388 ~ 8724352 (-)

Expression


Co-expression Network