AMCG00006463 (LOC107726005,LOC107656401,LOC107711505,LOC107581005)


Basic Information

Item Value
gene id AMCG00006463
gene name LOC107726005,LOC107656401,LOC107711505,LOC107581005
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5111162 ~ 5114090 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006463
TCTCTCTGTAAATCCATGTGGTTGACGCCTGGTTCCCAAAAAAGAAAGTGCATCATGACCAGACACATTGTTCCCCGTCCCTGATGATTCCCCTTTAAaagctcctgcagctgctgccccAGACAGATGTACATAAACAAATTGATAAGGACGCTGGGCAGCGACTGCGCTCCGCTCTGCAGACGAGAACGCGACTCGAGCTGAAATagtaatcattttaaacagattgtGCGGAAGCAGTGGGCTATGACTGCGTTTGGGTACCGCAAGGAGCTGGATAAATACGAAGACATCGACGAGGATGAACTCTTGTCTTCCCTCACCGCTGAGGAGCTGCAGGAGTTGGAGAGGGAGCTGTCTGATTTGGACCCGGACGACAACGTCCCCATCGGACTCAGGCAGAAGGACCAGACAGAGAAAACCCCCACGGGCACATTCAGCAGAGAGGCCCTGCTACAGTACTGGGAGAACGAGACTCGGAAACTCCTGGAGAATGAGAGGACGGGCTCGGGACTGAAACAGgaggaggaaggagagaaacACACCGATGACAGTGATGAAGACTGCGTGACGGAGAGTAACAGTGAGGCTTCGGAAGCAGAGGCATACactgaagaggaggaggaagaagaagaagaggaggaggaaaaggaggaagaggaggaggaagaggtagaggaggaggatgaaagtgaacatgaagaagaagaaaaagtagAAGTAGTAGCAGCTGTGACTGAAAATAAAGTTGCAGTTGAAGATGAAGGAGAGAAAATCAGGAACAGGACTTTGCTGCTAAAGGAACTGAAACCTTTAAACCTTTGTAACGGCCAGactgaagacaaacaaaatggcGCTGCTAGAAACGGCACACAACCAAGCAGCGAGGCGACAGCCAGCCGTCTGTGTGGAAACCCAACGGTGATCGACGACGCCCTGGAGAAGATTGTGAACAACGACGCCGACACCAGCGAGGTGAACCTGAACAACATCGAGAACGTCTCGCAGGACACGCTCATCCGCTTCGCCGAGGCTCTGAAGACCAACACGGTCGTGCGGGTCTTCAGCCTGGCCAACACACACGCTGATGACCGCGTTGCCTTCGCCCTGGCCCAGATGCTCAAGGAGAACACCTGTATCACCAACCTGAACATCGAGTCCAACTTCATCACCGGCAAGGGCATCCTGGCCCTCATGCGGGCCCTCCAGCAGAACACGGCCCTCACAGAGCTGCGCTTCCACAACCAGAGACACATCTGCGGGGGGCAGGTGGAGATGGAGATTGCCAAGCTCCTGAAGGAGAACACCACTCTGCTCAAGCTGGGATACCACTTTGAGCTCCCGGGCCCGCGCATGAGCATGACCAGCATCCTGACGAGGAACCAGGACCGGCACAGGCAGAAGAGGCTGCAGGAGCAGAGACAGCTGGGGCTGGAGAGGAAGGAAGGGCCAGAGGCACCGGCCAACCCCAGGACCAGTGCCCTGCAGAGAGCGACGCCAACGTCTTCCCCTTATTCTTCGCCGAAGAGCTCCCCGTGGTCCTCTCCCAAAGTGCCCCGAAACGCCCAGCTCAAAAAGAACGCCCCTCCGccgcctccgcctcctcctcctccacctcctcccccacctcccccacccccaccatgCCCACAGAAGAGCAAGCCCACCAGGAAGATAGCCGAGGCCATCAAACTCCATGAGCAGTCCAGAAAGAGACAGCAGGCGGGGCCACAGAAATCGAAAGGCAGGAAAGGCAAACGGGCGGAGAAGGAGAACAATATCCTGAAGGAACTAAAGAACGCTCTGAAGCCCATCTGTGAGAAGAAGGCAGAGGAGACGTCCCGGCCCTCGACACCACAGAGGTCCCTGCACGACGACCTCATGTCAGCCATCCGGAACAGCAGCACGAGACAGCTGAGAAGGgtaaatatacacaaatga

Function

NR:

description
PREDICTED: leiomodin-2-like

GO: NA

KEGG:

id description
K22030 LMOD; leiomodin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006463 True 1941 mRNA 0.56 2 5111162 5114090

Neighbor

gene id symbol gene type direction distance location
AMCG00006456 LOC108436892 coding downstream 43422 5063461 ~ 5067740 (-)
AMCG00006457 NA coding downstream 59971 5017795 ~ 5051191 (-)
AMCG00006447 NA coding downstream 618632 4484214 ~ 4492530 (-)
AMCG00006448 NA coding downstream 627282 4483234 ~ 4483880 (-)
AMCG00006441 NA coding downstream 634515 4454881 ~ 4476647 (-)
AMCG00006462 NA coding upstream 1626 5115716 ~ 5123628 (-)
AMCG00006470 NA coding upstream 236114 5350204 ~ 5390268 (-)
AMCG00006471 NA coding upstream 322453 5436543 ~ 5483801 (-)
AMCG00006473 NA coding upstream 396499 5510589 ~ 5513330 (-)
AMCG00006474 NA coding upstream 404581 5518671 ~ 5534047 (-)
G109782 NA non-coding downstream 90487 5020037 ~ 5020675 (-)
G109778 NA non-coding downstream 139974 4970864 ~ 4971188 (-)
G109761 NA non-coding downstream 363928 4746970 ~ 4747234 (-)
G109736 NA non-coding downstream 589793 4515937 ~ 4521369 (-)
G109735 NA non-coding downstream 595587 4514310 ~ 4515575 (-)
G109815 NA non-coding upstream 22428 5136518 ~ 5136744 (-)
G109875 NA non-coding upstream 231593 5345683 ~ 5347227 (-)
G109878 NA non-coding upstream 295250 5409340 ~ 5409571 (-)
G109916 NA non-coding upstream 320847 5434937 ~ 5435764 (-)
G109995 NA non-coding upstream 688482 5802572 ~ 5803261 (-)
AMCG00006429 NA other downstream 834007 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 934110 4168050 ~ 4177052 (-)
G109633 NA other downstream 945562 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 953039 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 1295645 3730042 ~ 3815517 (-)
AMCG00006476 NA other upstream 463380 5577470 ~ 5603733 (-)
AMCG00006491 NA other upstream 900014 6014104 ~ 6042924 (-)
G110140 NA other upstream 1671223 6785313 ~ 6785851 (-)
G110195 NA other upstream 1964299 7078389 ~ 7107138 (-)
G110507 NA other upstream 3608298 8722388 ~ 8724352 (-)

Expression


Co-expression Network