AMCG00006464


Basic Information

Item Value
gene id AMCG00006464
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5210028 ~ 5231466 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006464
acattttGTCCTTCCCTATTCCCCCGCCAGGTCTTCCTCAAGAGCGAGCGCGTGGCCAGGATGGTCCACTGCGGAGGCTGCTCCGCCAACGACTTCAGGGACGTCTTCAAGAAGAACATCGAGAAGAGGGTGCGCAGCCTCCCGGAGATCGACGGACTGAGCAAGGAGACCGTGCTGAGCTCCTGGATCGCCAAGTTCGACGCCATCTACCGAGGCGAGGAGGACTTCCGCAAGCAGTCGTCCCGGATGCACATGAGTGCCGTGTCGGAGCTGATCCTCAGCAAAGAGCAGCTGTACGAGATGTTTCAGCAGATCCTGGGCATTAAGAAATTCGAGCACCAGTTGCTATACAATGCTTGCCAGCTGGACAACACCGATGAACAAGCCGCTCAGATCAGGAGAGAGCTGGACGGGCGGCTGCAGCTGGCCGATCTGCTGGGAAAGGAGAGGAAATTCCCGCGCTTCGTGGCCAAGGAGATGGAGGCCATGTACATCGAAGAGCTGAAGTCCTCGGTGAACCTGCTGATGGCCAACCTGGAGAGCCTGCCCGTGTCCAAGGGAGGGCCAGACTTCAAACTCCAGAAGCTGAAACGCTCCCAGAACTCCTCCTTCCTGGACATCGGGGACGAGAACGACGTCCAGCTCTCCAAGTCCGACGTCATCCTCTCGTTCACCCTGGAGATCGTTATTGTTGAGGTGCAAGGATTGAAGTCCGTGGCTCCCAACAGGATCGTATATTGCACCATGGAGGTGGAGGGAGGCGAGAAGCTTCAGACGGACCAGGCCGAGGCGTCCCGACCACAATGGGGAACTCAAGGAGACTTCACCACCACGCACCCCCTCCCTGTCGTGAAAGTGAAGCTCTTCACCGAAAGCACAGGAGTCCTTGCCTTGGAAGACAAGGAGCTGGGCAAGGTCGTCCTGTACCCCACACCCAACAGCCCCAAAGCCGCGGAGCTGCACAAGATGGTAGTGCCAAAAAACAGCCAGGACTCGGATCTGAAGATCAAGTTGGCCGTGCGGATGGACAAGCCGCCCAATATGAAACACAGCGGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006464 True 1059 mRNA 0.58 6 5210028 5231466

Neighbor

gene id symbol gene type direction distance location
AMCG00006468 NA coding upstream 28297 5156598 ~ 5181731 (+)
AMCG00006458 NA coding upstream 60236 5139542 ~ 5149792 (+)
AMCG00006461 NA coding upstream 119351 5079750 ~ 5090677 (+)
AMCG00006455 NA coding upstream 193342 5015646 ~ 5016686 (+)
AMCG00006452 NA coding upstream 241995 4961206 ~ 4968033 (+)
AMCG00006467 NA coding downstream 12312 5243778 ~ 5301376 (+)
AMCG00006466 NA coding downstream 77031 5308497 ~ 5311416 (+)
AMCG00006465 NA coding downstream 90897 5322363 ~ 5345992 (+)
AMCG00006469 dld,LOC106561021 coding downstream 196264 5427730 ~ 5433636 (+)
AMCG00006475 NA coding downstream 259416 5490882 ~ 5491169 (+)
G109786 NA non-coding upstream 165395 5044416 ~ 5044633 (+)
G109780 NA non-coding upstream 187850 5021296 ~ 5022178 (+)
G109779 NA non-coding upstream 189625 5018089 ~ 5020403 (+)
G109767 NA non-coding upstream 285234 4923132 ~ 4924794 (+)
G109721 NA non-coding upstream 688779 4518917 ~ 4521249 (+)
G109837 NA non-coding downstream 120990 5352456 ~ 5353170 (+)
G109933 NA non-coding downstream 314741 5546207 ~ 5546436 (+)
G109978 NA non-coding downstream 568134 5799600 ~ 5804559 (+)
G110024 NA non-coding downstream 752324 5983790 ~ 5984250 (+)
G110081 NA non-coding downstream 987065 6218531 ~ 6220086 (+)
AMCG00006459 NA other upstream 75313 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 103006 5094271 ~ 5107022 (+)
G109795 wasl,wasla,LOC105018628 other upstream 111330 5080881 ~ 5098698 (+)
G109781 NA other upstream 184122 5024895 ~ 5025906 (+)
AMCG00006445 NA other upstream 682290 4524806 ~ 4527738 (+)
G110023 NA other downstream 747596 5979062 ~ 5982909 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other downstream 1288399 6519865 ~ 6588399 (+)
G110163 LOC100846954 other downstream 1680410 6911876 ~ 6912254 (+)
G110279 NA other downstream 2422206 7653672 ~ 7655194 (+)
G110445 NA other downstream 2944294 8175760 ~ 8176786 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_032253 cadpsb coding NC_007117.7 CM002890.2 41255485 ~ 41446053 (+)