AMCG00006465


Basic Information

Item Value
gene id AMCG00006465
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5322363 ~ 5345992 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006465
ATGCTCAGATTCGCCCGACCGAACGGCTGGGCAGTGGGGAGCCGCCTGTGTGGACACCGAAGGTCCCACCACCACAAGAGCATGCTGGCCATCCGGAGAGAGGACATCAACGTGTGGGAGAGAAGAGCGCCGCTGGCCCCCCGGCACGTCAAGGAGATCACCAACGCCGGGTACACGGTCCTCGTCCAGCCCTCCAACCGAAGAGCCATCCATGAACAGGCAAGGGTgccagcttaTTATGCTAAAGCTGGTGCCATTATCCAAGAAGACATTTCGGAAGCATCCCTGATAATCGGGGTGAAGAGGCCACCTGTAGAAAAAATCCTCCCCAGAAAGACCTATGCGTTCTTCTCCCACACCATCAAAGCCCAGGAGGCCAACATGGACCTTCTGGATGACATGCTAGCAAAGGAAGTGCGTATGATTGACTATGAGAAGATGGTGGACCAGAATGGAGTTCGAATCGTGGCGTTTGGGCAGTGGGCTGGAGTCGCAGGAATGATCAATATTTTGCATGGTCTTGGACTGCGCTTCCTCGCTTTGGGACACCACACTCCTTTCATGCATATCGGCATGGCTCATAACTACAGGAACAGCAGCCAGGCGGTTCAGGCCGTGAGAGACGCCGGCTATGAAATCTCTCTGGGTCAAATGCCCAAGTCCATCGGGCCACTGACATTTGTGTTCACTGGCACGGGCAACGTCTCTAAGGGCGCCCAGGAAATATGCAACGAGCTTCCCTGTGAATTTGTGGAGCCCCACGAACTGAAAGAAGTCTCGATATCCGGAGATTTGAATAAAGTTTATGGAACAGTGCTTAGTCGCCATCACCACGTGGTGAGGAAAACGGACGGAAAATACGATCCGCTGGAATACGAGCAGTTCCCGGAAAGATACACCTCTCGCTTTAACGTGGATATCGCTCCCTACACAACTTGCTTGATCAATGGGATTTACTGGGACTCCCACACGCCGCGCCTGCTCAATCGCAGAGACGCCCAGAGACTCCTCCAGCCCGTCCCGCCTTCGGAGAAATCCCGAGAGGGCCTGCCAGATCTGCCTCACCGATTCCTGGCAATATGTGATATTTCTGCGGATACAGGCGGCTCTATTGAATTCATGTCCGAGTGCACGAGCATTGATAGGCCTTTCTGTATGTATGACGCAGACCAGCATATTGATCATGACAGTGTGGAAGGCAATGGCATTTTGATGTGCTCCATTGACAACCTGCCGGCCCAGCTGCCTATAGAGGCCACCGAATACTTTGGGGACCGGCTTTTTCCTTACGTCGGGGAAATGCTTTCCTCAGATGCCTCTCTTCCCCTGGAGCAGCAAGAGTTCTCTGCTCAAGTGAGAGACgCAGTCATTGCATCTAATGGAAAACTGACTCCAAAGTTTGAATATATTCATAAACTCAGGGAGAGCAGAGAACGTGAGCTGATCCTGAAAATGGGTGGTAGGAAGCGTGTCCTGCTGCTGGGCTCGGGCTACGTTTCCGGGCCGGTCATTGAGTATCTCACCAGGGACAAAGACATACAGGTGACCGTAGCATCTGCAAGCAGAGACCAGGCCGAGGAGCTGGCCAACAAATACCCCAACACCATCCCCGTCCTGCTGAATGTCATCAACCAGGAGAACCGTCTGGTGTCGCTGGTTAAAAACCACGATTTGGTCATCAGTTTGCTGCCGTATTCGTTTCATGCCACGGCCGCAAAGCACTGTATCGGGAACAAAGTGAATCTGATCACGGCGAGCTACGTGTCCCCGGAGATGAAGGAACTTCAGAAAAGTGCCGAAGAGGCTGGCATCACAATTGTGAATGAAATGGGTTTGGATCCTGGCATCGACCACATGCTGGCGATGGACTGCATCAACCAGGCAGTGGCAGACGGAGGCACAGTGGAATCCTACACGTCGTTCTGCGGGGGGCTTCCAGCTCCAGAGTGCTCTGACAATCCCCTGCGCTATAAGTTCAGCTGGAGTCCCTACGGGGTGTTGCTGAACACCATCAGTGGTGCCACCTTTCTCCAGGATGGGAAGGTTGTCAGTATCAGTCCAGGGGGCGCCCTGATGGACTCGGTGACTCCGATGGACTTTCTACCCGGCTTCAATCTGGAGGGCTTCCCCAACAGAGACAGCACCAAGTACGCTGAGTCCTACGGGATCCAGTCAGCCCACACGCTGATACGGGGGACGCTGAGGTTCAAGGGCTTCTGCAATGCCATGAGTGGATTTGTCAAGTTGGGCCTGATTGACACAGAGCCTTGTCCAATGTTGGCCGGTGGAAGCGTTCCAGTCACCTGGAAAGCGCTCCTGTGCAAGTGTATCGGAGTCCCACCTTCAACCAGCACAGACATCTTCAAAGAGGCCGTGTACAATAAAATGGGCAGAGACGACTTCAGGATGGAAATGCTGAATTGGTTTGACATGTTAAGCGACGAGCCGGTCCCACAGGCTGAGACGATTCTGGATGCACTGACAAAACATCTGGAAGCCAAGCTCTCCTTTGggaaaggagagagagatatgaTTATCTTGAGAAACGATGTGGGCATCAGGCACTCCACCGGGGAGCTGGAAACCAAGCATATCACCCTGGTTGTGTATGGAGACCCCAATGGATTTTCTGCCATGGCCAAAACCGTCGGCTATCCGACAGCCATCACGGCCAAGATGGTGCTGGACGGTGAAATTCAGACAAAAGGACTGGTTCTCCCACTAACCAAGAACATCTATGGACCTCTGCTGAAGCGCATCCAGGCAGAGGGAATACAGATCAACGCAAAGAGCTCATTCTCAGACTAG

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K14157 AASS; alpha-aminoadipic semialdehyde synthase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006465 True 2808 mRNA 0.53 23 5322363 5345992

Neighbor

gene id symbol gene type direction distance location
AMCG00006466 NA coding upstream 10947 5308497 ~ 5311416 (+)
AMCG00006467 NA coding upstream 20987 5243778 ~ 5301376 (+)
AMCG00006464 NA coding upstream 90897 5210028 ~ 5231466 (+)
AMCG00006468 NA coding upstream 140632 5156598 ~ 5181731 (+)
AMCG00006458 NA coding upstream 172571 5139542 ~ 5149792 (+)
AMCG00006469 dld,LOC106561021 coding downstream 81738 5427730 ~ 5433636 (+)
AMCG00006475 NA coding downstream 144890 5490882 ~ 5491169 (+)
AMCG00006478 NA coding downstream 247760 5593752 ~ 5596707 (+)
AMCG00006480 slc2a13,LOC106609118,LOC106575984,LOC103369283 coding downstream 353625 5699617 ~ 5724043 (+)
AMCG00006479 NA coding downstream 417362 5763354 ~ 5769646 (+)
G109786 NA non-coding upstream 277730 5044416 ~ 5044633 (+)
G109780 NA non-coding upstream 300185 5021296 ~ 5022178 (+)
G109779 NA non-coding upstream 301960 5018089 ~ 5020403 (+)
G109767 NA non-coding upstream 397569 4923132 ~ 4924794 (+)
G109721 NA non-coding upstream 801114 4518917 ~ 4521249 (+)
G109837 NA non-coding downstream 6464 5352456 ~ 5353170 (+)
G109933 NA non-coding downstream 200215 5546207 ~ 5546436 (+)
G109978 NA non-coding downstream 453608 5799600 ~ 5804559 (+)
G110024 NA non-coding downstream 637798 5983790 ~ 5984250 (+)
G110081 NA non-coding downstream 872539 6218531 ~ 6220086 (+)
AMCG00006459 NA other upstream 187648 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 215341 5094271 ~ 5107022 (+)
G109795 wasl,wasla,LOC105018628 other upstream 223665 5080881 ~ 5098698 (+)
G109781 NA other upstream 296457 5024895 ~ 5025906 (+)
AMCG00006445 NA other upstream 794625 4524806 ~ 4527738 (+)
G110023 NA other downstream 633070 5979062 ~ 5982909 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other downstream 1173873 6519865 ~ 6588399 (+)
G110163 LOC100846954 other downstream 1565884 6911876 ~ 6912254 (+)
G110279 NA other downstream 2307680 7653672 ~ 7655194 (+)
G110445 NA other downstream 2829768 8175760 ~ 8176786 (+)

Expression


Co-expression Network