AMCG00006466


Basic Information

Item Value
gene id AMCG00006466
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5308497 ~ 5311416 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006466
ATGGACAGTGCGCTCTACCAGACCTCGGCGCTCTTCACCTCGGCTTCTGGGACAGGACACCTTTCCGCCGGAGACAACATGCTTGCCACCGCCAAACCCCTGGCTTTCTCCATCGAGAGGATCATGGCCAGGACACCTGAACCCAAGTCGGCACCTTTGCCCAACTTGCTCCAGTCGCCCGCCAACAAGGCAGACCCCAAGCCGGGCATCCACCTGAACCCCTGCATGATCCCCCTGGTGCCCCTGGCGTACGAGGCTGGGCACAAACTGGGCATCTCCGGGTCGGAACCCAGGAAGAGCCATTTGGACTCCTCTTCCTACATCCCCAACGACCTGCTGAGTCTTGGTTTGAATTACAAAGGCGACCTACCGGAGGGCAGCCCCGCGATAGGACAGTATAAACTTTTTCGCCCACGGGTGGTCAACCAGTCTTCTTTCCACGCCATGGGCACCTTGTGTTATCTGAACTGTGCAGAGAGCCCCTGTCCTCCGCCGGCGGGTCTCCTCAACCTGCACCCCATGGCTTCTTATCTCCTGAACTCGCCGCTCCACCCCCGCCAGAAGACCTTTCTGTCCGAGAAGCACAAGCTGGTGTCCTCGGTGGAGAGGTACCCGTCCGGAGTGGCCTTCAAGGACCTGTCCCAGAGCCAGCTGCAGCACTACATGAAGGAGGGCGCCCAGATCCTCTCCGAGAAGCTCTTCAAGAGCGCGTCCAAGCTGGCCAGCGGGGCGACCAGTGCCAAGCCCAAGGTGTTCACCTGTGAGGTCTGCGGCAAGGTCTGCGGGAAAGGCTTCCGCCAGGCGAGCACGCTGTGTCGGCACAAGATCATCCACACACAGGAAAAGCCGCACAAATGCAACCAGTGCGGCAAGGCGTTCAACCGCAGCTCCACGCTGAACACGCACACCCGCATCCACGCCGGGTACAAGCCCTTCGTGTGCGAGTTCTGCGGGAAGGGCTTCCACCAGAAAGGCAACTACAAGAACCACAAGCTGACCCACAGCGGCGAGAAGCAGTTCAAGTGCAATATCTGCAACAAGGCCTTCCACCAGGTGTACAACCTGACTTTCCACATGCACACCCACAACGACAAGAAGCCCTTCACCTGCCCCACCTGCGGCAAGGGCTTCTGCAGGAACTTTGACCTGAAGAAGCACATCAGGAAACTGCACGACAGCCCCCCGGGGTCCCAGACAGCCAACAAGGGGGACCCGCACCCGAGTCCATAG

Function

GO:

id name namespace
GO:0006351 transcription, DNA-templated biological_process
GO:0007275 multicellular organism development biological_process
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24502 FEZF; Fez family zinc finger protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006466 True 1230 mRNA 0.60 4 5308497 5311416

Neighbor

gene id symbol gene type direction distance location
AMCG00006467 NA coding upstream 7121 5243778 ~ 5301376 (+)
AMCG00006464 NA coding upstream 77031 5210028 ~ 5231466 (+)
AMCG00006468 NA coding upstream 126766 5156598 ~ 5181731 (+)
AMCG00006458 NA coding upstream 158705 5139542 ~ 5149792 (+)
AMCG00006461 NA coding upstream 217820 5079750 ~ 5090677 (+)
AMCG00006465 NA coding downstream 10947 5322363 ~ 5345992 (+)
AMCG00006469 dld,LOC106561021 coding downstream 116314 5427730 ~ 5433636 (+)
AMCG00006475 NA coding downstream 179466 5490882 ~ 5491169 (+)
AMCG00006478 NA coding downstream 282336 5593752 ~ 5596707 (+)
AMCG00006480 slc2a13,LOC106609118,LOC106575984,LOC103369283 coding downstream 388201 5699617 ~ 5724043 (+)
G109786 NA non-coding upstream 263864 5044416 ~ 5044633 (+)
G109780 NA non-coding upstream 286319 5021296 ~ 5022178 (+)
G109779 NA non-coding upstream 288094 5018089 ~ 5020403 (+)
G109767 NA non-coding upstream 383703 4923132 ~ 4924794 (+)
G109721 NA non-coding upstream 787248 4518917 ~ 4521249 (+)
G109837 NA non-coding downstream 41040 5352456 ~ 5353170 (+)
G109933 NA non-coding downstream 234791 5546207 ~ 5546436 (+)
G109978 NA non-coding downstream 488184 5799600 ~ 5804559 (+)
G110024 NA non-coding downstream 672374 5983790 ~ 5984250 (+)
G110081 NA non-coding downstream 907115 6218531 ~ 6220086 (+)
AMCG00006459 NA other upstream 173782 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 201475 5094271 ~ 5107022 (+)
G109795 wasl,wasla,LOC105018628 other upstream 209799 5080881 ~ 5098698 (+)
G109781 NA other upstream 282591 5024895 ~ 5025906 (+)
AMCG00006445 NA other upstream 780759 4524806 ~ 4527738 (+)
G110023 NA other downstream 667646 5979062 ~ 5982909 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other downstream 1208449 6519865 ~ 6588399 (+)
G110163 LOC100846954 other downstream 1600460 6911876 ~ 6912254 (+)
G110279 NA other downstream 2342256 7653672 ~ 7655194 (+)
G110445 NA other downstream 2864344 8175760 ~ 8176786 (+)

Expression


Co-expression Network