AMCG00006467


Basic Information

Item Value
gene id AMCG00006467
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5243778 ~ 5301376 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006467
gtATCTCTATGTGCTTGGACAGAAGGTTTGGAAGCGATGGAAAAGGAGATATTGTGTGCTTGTCCAGgtTAGCCAGTACACCTTCGCCATGTGCAGTTACAGAGAGAAGAAATCCGAACCTCAGGAATTAATGCAACTCGAGGGATATACTGTTGACTACACAGACCCTCCGCCAGGTCTGACGGGTGGCCGAGCTTTCTTCAACGCTGTAAAAGAGGGAGACATGCTGGTGTTTGCCAGTGACGACGAGCAGGACCGCGTGCTGTGGGTGCAGGCCATGTACCGAGCGACGGGGCAGTCATACAAGCCTGTGCCCCCGGCGCAGAGACAGAACTGCCGCGGAGGCAACCAGCAGGCGGACGCCCCCGTGTCTCTGCTGACTTCGGAACGCTCTCAGAAGCACGGGATGGACGAGTTCATCTCTGCGATGCCGTGCAAGTTCGGCCACGCGGCCCTGTTTCGGGTGCTTCAGAAGCAGACGCTGCAGCACCGGATGAATGACTCCTTCTCTTGTCTGGGCTGGTTCAGTCCAGGCCAGGTGTTTGTGCTGGACGAGTACTGCGCCCGCTACGGGGTGAGGGGCTGCCACCGCCACCTCTGCTACCTGCAGGAGCTGATGGAGTACGCCGAGGGCAGAGCCGTCATCGACCCCACCTTGCTGCACTACAGCTTCGCCTTTTGTGCTTCTCACGTTCACGGCAACAGGCCGGATGGAATCGGAACCGTCACCATTGAGGAGAAAGAACAATTTGAAGAGATTAAAACCCGACTTCTGTCTCTGCTTGAAAACCAGATTGTCCATTTCAGGTATTGTTTCCCGTTTGGCCGGCCGGAGGGGGCCTTGAAAGCCACTCTTTCCTTGCTTGAAAGGGTCTTGATGAAGGACATCTCCACGCCCGTTCCCGCGGACGACGTGAAGAAAGTGATCCGCAAGTGTCTCGAGAAAGCCGCCCTGATTAACTACACCCGCCTAACGGAGTACGCGAAAATCGAAGGTCCGTACTCGGGGGTGACCGCTTCAGAAGCGCCTGAGAGAAACAACAAAGTATGTATAgcgtattcatatatatatatatatattactatagaCACTATGAACCAAGCAACACCAGCGAAGAAGCTAGAGGATGTCATTCGACTCGGAGAACTGTGTATAGAGGTACTTCAGCAGAATGAGGAGAACCACTCGGAGGCCTTTGCCTGGTGGCCGGAAGTCATGGCAGAGCACGCCGAGATATTCTGGTCCATGTACGCTGTGGATATGGATGCCGCCTTCATGGTCCAGCCCCAAGACTCCTGGGACAGCTTCCCCCTTTTCCAGGTCCTCAATAACTTTCTGCGCGGTGATGCTCACCTGTGCAATGGGACATTTCATAAGCACTTGCAGGAGCTGTTCGTCCCCCTGGTTGTGCGCTACATTGACCTCATGGAGTCCTCGATCGCTCAGTCCATCCACAGGGGCCTGGAGCAGGAGACGTGGCAGCCAGTTAAGACGATTACCAACAGCCTTCCCAATGTGCCTCTACCAAAAGTTCCCAGTCTGCCTCTTAATCTTCCTCAAATCCCTAGCTTTTCGGCACCCTCCTGGATGGCTCCTTTATATGACAACACGTGTGTATTTTGCAGGGTCCACAATCCGGAGTTTGCTCAACATCTGGAACAGCGACTCAAGCTGATGGCCAGTGACATGGTCGAAGCCTGCGTCAAAAGAACAAAAGCGGCATTCGATGCCAAAATGCAGAAGGCCAGCAAATCGACTGATTACAGAGTGTCTCCTTCTGTTTGCACCATGTTTAACGTGCTAATGGACGCCAAGAACCAGAGTGCCAAACTGTGTGTGCTAGCTGCCGGGCAAGAGCAGCAGTACCATTCCAAAATTGACGACCTGATTGAAGAGGCTTTCAAAGACATGATTTCCTTGTTGGTTTCTAAGTTTGTTGCCGTTCTAGATGGCGTGTTGTCCAAGCTGTCGAGATACGATGAAGGCACGCTGTTTTCCTCCATCCTGTCCTTCACAAAACCTGGAATGGACCTGGCGGACACTTACATCACCTTTGTGCGGCAGAACCAAGATATCCTGAGGGACAAGGTCAATGAGGAAATGTATATTGAGAAAGTATTTGATCAATGGTACTGCAGCTCCACGAAGGGCATCTGTGTCTGGCTGACGGACCGGCTCGATCTTCAGCTCCACATGTATCAGCTGAAAACCCTGATCAAGATCGTCAAGAAGACCTACCGTGACTTCAGACTACAGGGGGTGTTGGAGGGGACGCTGAACAACAAGACCTACGAAACCGTTTACAACCGCCTCACCCTGGAGGAGGCCACGGCGTCAGTGGCGCAGAGCGGGGCGCTGCAGGGGATTTCGATGAGGGACAGCGACGAAGAAGAGGGATGATGCCCATGAGAGAATCGCACGGGGTCACGCGTCCGCCCCCTGCGCCTCTCCCGAAACAGACACGCACTAGAACTAGAACTAGCACTGCCGCCATCACgatggtgttgtttttttctacatCGATGCCAAGAACACTCATTCTCAACTGctctataaatacatacatatataaatatatataaatataatataccaGATGTGTGTAAACCGTTTCACTTTTTCAATCTTGTCGACTTTAATCTCGTTACGTTCCATCGTGTAAAATCGCACATCTGTGTTTCTCACGCTAATGGGAACGACCGTCTGAGTGCCTAGTACTTTGATGAACCGTGTTTAAGCTGTCACAATCTGTCGAGTGTGTCCAATTGTGCGCCGAGGTGCCGTCACTTCACCCGCACACACTGGGCGCGTCTGTGCCGAGACCCAGCATTCGAAtatccttcttttcttttttaaacttctGCTCCTGGTGATGTCGTCTCCCGAGGGCTACAGGACCAACGCACTCTGTTCCTCATTACCGGGGTGTTAGTCATCCATTTGTGCCTCTGTGCTTCTCATTGGTGACAAAGTTGACGTGACGGACACCGAGGCCCGTGTCCGGCGTGTACCTGTGTGTCCAGTGCCAATCTAAGTGCCAAGATTGTGTGCATAACCTTGGGAAGAGATGTCTGATGAAGTTATGCCGGAACACTTGAAAGAGGTTGTCCATTACGTTCACAGCCAAACTACTTGATAACTCCTTGGCATTAagactgtatatttatattgtcacATGTACGCCTGCATTTGTTCAGGTGCCCAGTAAAGTGttagaataaagtgttttaatgaaa

Function

GO: NA

KEGG:

id description
K19933 CADPS; calcium-dependent secretion activator

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006467 True 3237 mRNA 0.51 19 5243778 5301376

Neighbor

gene id symbol gene type direction distance location
AMCG00006464 NA coding upstream 12312 5210028 ~ 5231466 (+)
AMCG00006468 NA coding upstream 62047 5156598 ~ 5181731 (+)
AMCG00006458 NA coding upstream 93986 5139542 ~ 5149792 (+)
AMCG00006461 NA coding upstream 153101 5079750 ~ 5090677 (+)
AMCG00006455 NA coding upstream 227092 5015646 ~ 5016686 (+)
AMCG00006466 NA coding downstream 7121 5308497 ~ 5311416 (+)
AMCG00006465 NA coding downstream 20987 5322363 ~ 5345992 (+)
AMCG00006469 dld,LOC106561021 coding downstream 126354 5427730 ~ 5433636 (+)
AMCG00006475 NA coding downstream 189506 5490882 ~ 5491169 (+)
AMCG00006478 NA coding downstream 292376 5593752 ~ 5596707 (+)
G109786 NA non-coding upstream 199145 5044416 ~ 5044633 (+)
G109780 NA non-coding upstream 221600 5021296 ~ 5022178 (+)
G109779 NA non-coding upstream 223375 5018089 ~ 5020403 (+)
G109767 NA non-coding upstream 318984 4923132 ~ 4924794 (+)
G109721 NA non-coding upstream 722529 4518917 ~ 4521249 (+)
G109837 NA non-coding downstream 51080 5352456 ~ 5353170 (+)
G109933 NA non-coding downstream 244831 5546207 ~ 5546436 (+)
G109978 NA non-coding downstream 498224 5799600 ~ 5804559 (+)
G110024 NA non-coding downstream 682414 5983790 ~ 5984250 (+)
G110081 NA non-coding downstream 917155 6218531 ~ 6220086 (+)
AMCG00006459 NA other upstream 109063 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 136756 5094271 ~ 5107022 (+)
G109795 wasl,wasla,LOC105018628 other upstream 145080 5080881 ~ 5098698 (+)
G109781 NA other upstream 217872 5024895 ~ 5025906 (+)
AMCG00006445 NA other upstream 716040 4524806 ~ 4527738 (+)
G110023 NA other downstream 677686 5979062 ~ 5982909 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other downstream 1218489 6519865 ~ 6588399 (+)
G110163 LOC100846954 other downstream 1610500 6911876 ~ 6912254 (+)
G110279 NA other downstream 2352296 7653672 ~ 7655194 (+)
G110445 NA other downstream 2874384 8175760 ~ 8176786 (+)

Expression


Co-expression Network