AMCG00006476


Basic Information

Item Value
gene id AMCG00006476
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5577470 ~ 5603733 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006476
ATGACCGTGTCCGGTATGACAACTATGTCAAGAATAATCTGGCACCTCCTGACTGCCCATGTGGAGCAGTATGAGTACTTCTCGCACGGGAAAATCTGGTTCACAGTGTCTGAGCAGCGCGCGCCAGGTCCAACAACTTTCACGATCATTACAGgtcAATGCAAATTGTATGGCGACCCCCACTATGAGACGTTTAATGGGAACAAGTATGCCTTCTATGAAAACTGCACGTACATTCTTGTGGAAGAAAAGGTCCCAACATACAACTTCACTGTCGCGGTGGACAATTTCCTCTGtaccaaaacaaaatcttgTGCAAAAGGGATTATACTGAAATATGGCAGCAATATTGTGACTCTCagcatagaaaaaaacaacattgtgtccaCATTCAACCAGAATATTGTGAAACCTCCATATAGAGCGAATGGAATACAACTTATTTCAACCACACAAAAGGTTATAGTTTCCATTGAGGACATTCGATCGAGTGTGTCTCTAACAACTAATTATGGGATTGAAGTCAGGGTGGCAATGAAGTATTTTATGAACAATACTCAAGGACAGTGCGGTGTGTGCGGTGGAAGTGCCTGTGTCCGCACAAATGGGGCAACAGAGAGCGAGGATTGCTGTGATAAGACTGCCTATGACTGGCTGTACAATGATCCAAACAAGCCTTATTGCAAATCTGCCCCCCGTGATATCCCCTGCAATGTTACAcatccacctccacctccatgTAATCGTACTGGCATCTGCAACATAATATATGATACGGTTTTCGAAGAATGTAGAAAGAAAGTCAATTTAACAACGTACTTCGAAAGCTGCAAATTCGACTACTGTGCATCTAATTCAAGTTATCAAACCTGCTCCTCACTTGAGCAAGCCGCACAGCGATGTAAAGAGGTGAACATCTGTGTAGAGTGGAAACATCTCACTGGTGGCGTCTGCGGCAATGACATGTGTGAGCCGAAGAAGTCCATTGTAAAACTACAAGATGGAAATTGCACAGCAGATGTAGAGATGACTGCA
>TU137664
TATCTGACTTTTACAGTctgtgtcattttttatttgaaaccgatttgttttttttaatctattgatACATTTGTTTCCGTATCTATTCATTTAAAGGGACAGAAGATTTGGGATGAGGCCGGCTGCTGCTTCACTTGCAATGACATGTGTGAGCCGAAGAAGTCCATTGTAAAACTACAAGATGGAAATTGCACAGCAGATGTAGAGATGACTGCATGTGAAGGCCAGTGCGAATCTACAGCTGTggtGGCACATTCTGAACAAGGCTTCAGTCTtcagaagaaatgcaaatgcTGTCAAGTACAGAAGACCGAACAGAGAGCTGTATCTTTGAAATGCAGCGATAATGTTTCCAAACAATATAAATACCAGTACACAACCAGCTGTACATGTTCTGTTTGTGGTGGGGACGAATAACAACATTCCTCTATCTGTCCATGTGATTTACATTACTGCATGAGCATCGATtgctttgtttcagtttcaaattaaaacaaatctactcATGTTTATGTACCTGAGAATAGTTAACAtactggaaacaaatatattgaaaaagatTAATCACGGCTAATTTGAAACCAACTGTGTTAAAGAAAAAGCCTCTTATATTTCACTATCTTATCTTTTGATATAATACATCTCTCCTGGGCATACTCTTTTTATGATTAAATGGTTTGAATGTCTTTCCTTAaccaataagtaaataaaatgttctttgcAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006476 True 1035 mRNA 0.44 8 5580430 5603733
TU137664 False 727 lncRNA 0.35 3 5577470 5580727

Neighbor

gene id symbol gene type direction distance location
AMCG00006472 NA coding downstream 25613 5550817 ~ 5551857 (-)
AMCG00006474 NA coding downstream 43423 5518671 ~ 5534047 (-)
AMCG00006473 NA coding downstream 64140 5510589 ~ 5513330 (-)
AMCG00006471 NA coding downstream 93669 5436543 ~ 5483801 (-)
AMCG00006470 NA coding downstream 187202 5350204 ~ 5390268 (-)
AMCG00006477 NA coding upstream 49542 5653275 ~ 5657121 (-)
AMCG00006482 NA coding upstream 61242 5664975 ~ 5697656 (-)
AMCG00006481 NA coding upstream 168512 5772245 ~ 5783145 (-)
AMCG00006486 NA coding upstream 375394 5979127 ~ 5984291 (-)
AMCG00006492 NA coding upstream 382917 5986650 ~ 5991143 (-)
G109916 NA non-coding downstream 141706 5434937 ~ 5435764 (-)
G109878 NA non-coding downstream 167899 5409340 ~ 5409571 (-)
G109875 NA non-coding downstream 230243 5345683 ~ 5347227 (-)
G109815 NA non-coding downstream 440726 5136518 ~ 5136744 (-)
G109782 NA non-coding downstream 556795 5020037 ~ 5020675 (-)
G109995 NA non-coding upstream 198839 5802572 ~ 5803261 (-)
G109996 NA non-coding upstream 199765 5803498 ~ 5804452 (-)
G110015 NA non-coding upstream 250081 5853814 ~ 5855502 (-)
G110152 NA non-coding upstream 1216505 6820238 ~ 6820568 (-)
G110165 LOC100846954 non-coding upstream 1308143 6911876 ~ 6912252 (-)
AMCG00006429 NA other downstream 1300315 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 1400418 4168050 ~ 4177052 (-)
G109633 NA other downstream 1411870 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 1419347 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 1761953 3730042 ~ 3815517 (-)
AMCG00006491 NA other upstream 410371 6014104 ~ 6042924 (-)
G110140 NA other upstream 1181580 6785313 ~ 6785851 (-)
G110195 NA other upstream 1474656 7078389 ~ 7107138 (-)
G110507 NA other upstream 3118655 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 3180172 8783905 ~ 8794062 (-)

Expression


Co-expression Network