AMCG00006481


Basic Information

Item Value
gene id AMCG00006481
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5772245 ~ 5783145 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006481
GGAAAGCTTTGAGGTCGAGATTAATTTTCTTATTTGCAATTGAACCGGGGTGGCATGCATTATTGTAAAAATGTGATAATTCATCCTTTCCcagtctttttattatataatccTTAACTTCAGCATTATTTATATGGGGTGAATATATCAGGCAGCAacacttgtttgtttaatgcaaTGATTGCAAAACATACAGGGAATATGCACAAGTGAACTAATTAAAACGTAATCTAATTGGCCTCAGCtcggttttattttaatgtgtccatttgttttctgtgtaaaataaacgAGTGAAACGAGTCACGCGCGCTCGAGGAGGCCAGCGCGCGCTGGTTAATATCCCGTAAATAAATCTCTTAAAACTCACAGCTGTGTTTTATCCGTTTAAATGGACACATATTGACTTTCCATttaggtattattattactgttttatcTTCGCACTCTTCGTGTATTTTTATCACCGACTTActggaaatcaaatcaaacgGTCCTGCGTCGCCGTGTCTGAGGCGGGATGAACTGGGTCGGGGGCTGCAGGAACAGAGCCATGTTCAAAAATGACGTACGGAAACAGAAGGAATTTTTTGAAAAGAAGAAactgcaaaagaaaatgaagcttTTAGGAGTGCTAAAGTCTCCTCAGAAGGACAATGCTGGCAGCATGGACTTGCTCACGATGTTCGTTGTGAACCAGATTTCTTCAAAGAAGGAGAACAGCAGTGTACCGATGAAATTGACCCATGTTGGCAAATTCAAGGGAGCTCAACCGACTGTAAGACGAGACATACAGCTACCGATGTCCCCCGGACCGCCCTCCAGATTGTGTCTTGAGGAGAGTCAGCCGCAGTACAGTGTCCAGAACTTCGGTTTGGGTAGAAAGAAAAAGAGCTACTCAAAATATGACAGTCTGAAATACAGCCAGTTATCTCCAGTGCTGGAGTCCAATTTTTCCGACTGCAGTAATATAGATTACCAGCACTGTGTGCCCAATGGCCTCAGTCCCCTGTTTTCATCAGTGAGGTATCCTATCACAGAGAAGGGTCACTCCCCTCCGTGGGGAGTAGCCTCCGATGACACGAACCAGCCTCAGCAGTGTGATTACAGCTTCTCCAAAGACAACGAGGAGGAAGACAACCGCAGCTTTGGAGCTTTTGAAGATGCACAAACATATGCCAGTCAAGCATCCCGTCACTCTTCATTGGGCTATGAATCTCCAAACTACTCCCCAAAGGAAGCCTCTCTCTGTACGGAGGATTCAGAGGAAGATTATAAAGGCGTGTGTGGAGATGGACCTTGTGTAGATAGATTTAACAAAGAACCCGTTTCAACAAGGCCCGGACCTGCAACAGCCCTGCCATTGACTGTCACTGAGGTAACCATTATCTCAAATGCTAATAAAGCAACTGACCTTCATATGAGTGAGAAAAACCCAGGCAGAAGAACCAGGAAGGATGTGGACCGAGACCAGTCTGTGCCGTCACATGTGCAGTCCAGGCTACAGGGTCCAAATGGCGCTAAAAGAACCAAGAATGTGACAACATGCCACAGCAGGGACGTTGGGACACAGACTGACAGTATCCTTAAGTTCCAGAAATCAGACACTGCAACCCAGTGCAATCTTGGGAAAAAGGATCCAGCTGAATTGAATCGCATTCTTGAGAAACGTAAAGTGACCAACAGGGGGCAGACAAGTCATAAGAATGCCATAGCAGAGCCCAGTTCAGCTACAGCTATGCCAGGCATCTGTGTAGAAACAGGTTATTTGTCCTTGAGTAAATTCACTACAAGGCACCAGAACAAAAACGACCAAACAAGTCCAAGAGAGCGCTCAAGAGTTTCGGATAAAATACCTGACAGCTCACTAAACATGGTGACTGCAAATCCCAAGAGCAGCCACACACGGGACTCCCAAAACATGAGACCACTGTATGGAAACGACAGACGAAGGAACCTGTCCAGTGGGGAAGATCTACCAAAAGGTCTGAGACAAGATCCCATTATAGAAAACTATGGGGGTGTAGCAGGACGAAACGCACACACTTTATACAGTGAACACCTGACCGAAGATCGTGTGCCTGTGAATATGGATGGAAAACGGGGTACAGATCTGACACCTGAAATCAAGGTGAAAAGGAGCTCTGAAGAGACAAAGACCCTTCATGAAATAGCAGACATTTTGCTAATGTTAGGACATAAGAGTAAATTTCAGTAAGATAATGTTTTTCCAGTGTCCATAGTTCTTGAGTATAACTTCAAAATACTCAAAACCACCACCGGAACATGAGGAATCCACTCGCCGTATCTTCCACTCTCATTAAAATCACACCAAGCATTGCTAGATAATTATCTGGTTTATTTTGtccatttacatatttaatgaatatatgCAGTTTTATATAAAGATAGACTCTAATAAAACATATAGCAACAATTACCAAATTAGCTACAGCACTAATTAGTTTTTCTCACTAATATTTCATAAACTGTATAAacactttgtatttttcaattacaattgTTTCACATAGGAAAATTGCACCTGTCCACTATAAATAAAACTTCAGATGCCCTGATTGGTgaataaagcaaagcaaagaaaaaagaaatgtgggTTGCCAAGGCCTTCTAATGATGAAAGTTTCCATTAATTAGCCAAGTATTAAAgctgttattgttttgaatttaaataaaatttatCTTCAAGATCTAGTACCtcaatttgtatttgctgtttCATATAAGTGCATAAGTTATTACAGTCatattttgtgcatttaaaataacttccgATATCTTCCCTGTTCAATGCGAATCAATTCCAATACCATCAATGCAGAGCCATCTGGGTTGATACTACAATTAATATACatctttattaaattttttctgcaataaaaaaaaagctacaatCATCTGATATTAATAATCTGTCCAGCGTTCTGCAGCTTGGCAACCCAAACCAAAACATCCctcatgaaatgcatttcaggaaGCTTGGACATACACTTCATGAACATGTAGTGAATCCCCCTATAACCAAGCCTGCATTAACAGCACGAAATGAAATTTACAACATGTTGCAAGATCATCTGACAGCTTCTGCGATTGCCCAGTCTCCACAGCGATGTACAGAACACAGAAACCTTGAGACAGAAAGTGTAAGAGAGCAGGCCTGGGTAAACACCAACAGATCATTTGCCACAAAACAGCATAGTAACTTTACTAATAGCAGTTATGTTAAAGTAATGTTTTCACCATTGAACAAACTTGATACTATGAGCAGTCGTTTTCGGTAGTGACAGATATGCACATCACTTATTTCTCAGTCGACAGCCTCCCAGAGAGTCGGCTGGACTCGACACTATGGAAAACCAACTACAGGTTGGTGTTTACCTTTACAGTACGATACCACCTAATACAGCATTTGCATTTCATCACCGCGTATTAAAACGTAACATTTTCAACATACATTACTGTTAACATTGATAACACACTGATCCCACTCTGCCACGTTACGGATAGATATGCAATTTATTTGTACACAAGGCTACAGAGGAAGACGGAACAAATTGTTCCAAGAAACATACAACTATCCttctatttgaaataaaaaaaacaacaagtatGCAATTTCATATGCAACAACAGTGTGTAATCTGTAAACATTGTacctgcaattaaaaataaaacacaataaaatatgttgtttacAAAAATATCCTCTGCTTCTGGTCTGGAGAATAATTGTCCTGGTTATTCACACATCCTCTTGGTTTGGTACAATTACGCAAACATTAgaactggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006481 True 3812 mRNA 0.40 10 5772245 5783145

Neighbor

gene id symbol gene type direction distance location
AMCG00006482 NA coding downstream 74589 5664975 ~ 5697656 (-)
AMCG00006477 NA coding downstream 115124 5653275 ~ 5657121 (-)
AMCG00006472 NA coding downstream 220388 5550817 ~ 5551857 (-)
AMCG00006474 NA coding downstream 238198 5518671 ~ 5534047 (-)
AMCG00006473 NA coding downstream 258915 5510589 ~ 5513330 (-)
AMCG00006486 NA coding upstream 195982 5979127 ~ 5984291 (-)
AMCG00006492 NA coding upstream 203505 5986650 ~ 5991143 (-)
AMCG00006490 NA coding upstream 211669 5994814 ~ 6001150 (-)
AMCG00006493 celsr1,LOC108427079 coding upstream 268182 6051327 ~ 6067994 (-)
AMCG00006496 LOC106576003 coding upstream 308080 6091225 ~ 6097143 (-)
G109916 NA non-coding downstream 336481 5434937 ~ 5435764 (-)
G109878 NA non-coding downstream 362674 5409340 ~ 5409571 (-)
G109875 NA non-coding downstream 425018 5345683 ~ 5347227 (-)
G109815 NA non-coding downstream 635501 5136518 ~ 5136744 (-)
G109782 NA non-coding downstream 751570 5020037 ~ 5020675 (-)
G109995 NA non-coding upstream 19427 5802572 ~ 5803261 (-)
G109996 NA non-coding upstream 20353 5803498 ~ 5804452 (-)
G110015 NA non-coding upstream 70669 5853814 ~ 5855502 (-)
G110152 NA non-coding upstream 1037093 6820238 ~ 6820568 (-)
G110165 LOC100846954 non-coding upstream 1128731 6911876 ~ 6912252 (-)
AMCG00006476 NA other downstream 168512 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 1495090 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 1595193 4168050 ~ 4177052 (-)
G109633 NA other downstream 1606645 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 1614122 4152816 ~ 4158123 (-)
AMCG00006491 NA other upstream 230959 6014104 ~ 6042924 (-)
G110140 NA other upstream 1002168 6785313 ~ 6785851 (-)
G110195 NA other upstream 1295244 7078389 ~ 7107138 (-)
G110507 NA other upstream 2939243 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 3000760 8783905 ~ 8794062 (-)

Expression


Co-expression Network