Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006487 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 5984473 ~ 5985996 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K15901 | CGI121, TPRKB; EKC/KEOPS complex subunit CGI121/TPRKB |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006487 | True | 1093 | mRNA | 0.42 | 4 | 5984473 | 5985996 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006483 | cpne8,LOC108427072,LOC108279828,LOC101074159,LOC102297242 | coding | upstream | 26423 | 5918930 ~ 5958050 (+) |
| AMCG00006485 | NA | coding | upstream | 130022 | 5808944 ~ 5854451 (+) |
| AMCG00006484 | abcd2,LOC107566844,LOC107689723,LOC107689245,LOC105891163,LOC106609116,LOC106575983 | coding | upstream | 186166 | 5783737 ~ 5798307 (+) |
| AMCG00006479 | NA | coding | upstream | 214827 | 5763354 ~ 5769646 (+) |
| AMCG00006480 | slc2a13,LOC106609118,LOC106575984,LOC103369283 | coding | upstream | 260430 | 5699617 ~ 5724043 (+) |
| AMCG00006488 | NA | coding | downstream | 3493 | 5989489 ~ 5996070 (+) |
| AMCG00006489 | trmu | coding | downstream | 15125 | 6001121 ~ 6009470 (+) |
| AMCG00006495 | gramd4 | coding | downstream | 122599 | 6108595 ~ 6128500 (+) |
| AMCG00006494 | gramd4 | coding | downstream | 149511 | 6135507 ~ 6150798 (+) |
| AMCG00006497 | NA | coding | downstream | 236821 | 6222817 ~ 6234153 (+) |
| G110024 | NA | non-coding | upstream | 223 | 5983790 ~ 5984250 (+) |
| G109978 | NA | non-coding | upstream | 179914 | 5799600 ~ 5804559 (+) |
| G109933 | NA | non-coding | upstream | 438037 | 5546207 ~ 5546436 (+) |
| G109837 | NA | non-coding | upstream | 631303 | 5352456 ~ 5353170 (+) |
| G109786 | NA | non-coding | upstream | 939840 | 5044416 ~ 5044633 (+) |
| G110081 | NA | non-coding | downstream | 232535 | 6218531 ~ 6220086 (+) |
| G110147 | NA | non-coding | downstream | 809753 | 6795749 ~ 6795994 (+) |
| G110161 | NA | non-coding | downstream | 869884 | 6855880 ~ 6857998 (+) |
| G110167 | NA | non-coding | downstream | 951248 | 6937244 ~ 6937664 (+) |
| G110201 | NA | non-coding | downstream | 1157271 | 7143267 ~ 7143659 (+) |
| G110023 | NA | other | upstream | 1564 | 5979062 ~ 5982909 (+) |
| AMCG00006459 | NA | other | upstream | 849758 | 5127357 ~ 5134715 (+) |
| AMCG00006460 | wasl,wasla,LOC107698525 | other | upstream | 877451 | 5094271 ~ 5107022 (+) |
| G109795 | wasl,wasla,LOC105018628 | other | upstream | 885775 | 5080881 ~ 5098698 (+) |
| G109781 | NA | other | upstream | 958567 | 5024895 ~ 5025906 (+) |
| AMCG00006501 | fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 | other | downstream | 533869 | 6519865 ~ 6588399 (+) |
| G110163 | LOC100846954 | other | downstream | 925880 | 6911876 ~ 6912254 (+) |
| G110279 | NA | other | downstream | 1667676 | 7653672 ~ 7655194 (+) |
| G110445 | NA | other | downstream | 2189764 | 8175760 ~ 8176786 (+) |
| AMCG00006552 | NA | other | downstream | 2724754 | 8710750 ~ 8724066 (+) |
