AMCG00006492


Basic Information

Item Value
gene id AMCG00006492
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5986650 ~ 5991143 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006492
ATGGCAGGATCTCTCGGGGTGTTGAAGAGGTTCAGTTTAGACCTGGAATCTTCTACAAACTTTTCCACCACCTCGTTCGTCCCGGCTTTCACCCGTGGCTTCACTGAAGCCCGAGGACCGTCGGTCAAGCCCCACCGCTACGCATTTCTCTTTATGGCGGACCGGCCCCAGAAACACTTCATCATCGTCCTCATTGTCACCACTGCCACTGCACGGGTGCCCGtgtttcagcagcagcagcagcacagaggcGGCGGCGAGTTCAGACCAGAGCGCATCTCCTGCGTGATCCAGCCTCTGCGAGCTCGAAGACTGAAGAGCACTCCGGCTGTGGGAGAGGGGCCGGAGAGGAGACAGTACTGGCCTCTGAGCAAAGAAGAGCTGGCCACCGGCACCATGATGATCCTCATTATCCTGGTGACCCTATGGTGCACCCGGGCAGGACAGGAGCTGTGCAGCTAGCAGGACCCACACTGTCGACTGCTGAGGAAATGTATACCGGTCACTACAAAAGAAGGGAACAAATCTATACATTTCTCTCACCTACCAGGGAGGAGACCTGTGCACAACTGGAAGTTATGGGTGGAAGGAAGGAGTGTATATCGTTGAGATCTTGGCACAACATTTGATCTTCAGATACTGTTGTGTGGAGTTTCTCTAGGTCTTTAGTTTGTGTGATATTGCTGCGTGAACAGTGCAGGTCAAACTGCTGTCTGTTGCTCCAGACACACCAGCTTGGAGACTGAAATGCTGGTCTTGGATTTCCAGTTTGGATCTGCAAAGGAGACTTGGTCCAATCTGTATATGCCAAGCTATACTGGAATCTACAATTCTCCATGAAACCACACGGAAACATGATGTTACCATGTTAATTAAGTGTAATGTTGTTGAAATTCATATCTGAGACTCCTGCCTGTCACAAATGTTGATGCAATGCATACTTTTATTTATGCTAATAAGGTAGCAGGCTGTCATATGTGCGCTCATCAAGATATGGTCATCAAGCTTCCAGAAATGTTGATGCCCAGGAGTGAGTTAAACAAAAGCTCCGGAAGAATGtcctacacaaacacagaagatgGAAAATGAGGTCGCCTGCATATTTACTCTATCCCTAATGATGTAAAACCGTTCCTGTTCCAGAGAGCTGGATCACAGCATGAGATAAATTCAATTGCCTTGTTTCAAGTGCATGTCACCCGTTGCTTCACTGTAACTGGGAAGTtgctataaaatgtgatgtggCTTTTTGAATTGCTAACCAGCAGTTTTAAATGAGGGGTACACTTGACAATAAGGAAAATGCCTGGATGTTTTTCTTGGATTAACATTTCATCGCAGTTGCAGTGATCTCTGGTGTAAAGGTTTAGTTATAAttcacttcagttttttttttattttttattttattttgatttaacttTACACATTTTAGTCAGGAATCCACATCTAATACTATATTTTATAAACTCaagttgttatatatatatttttttcttcaaatgtaaaaaaacatttggatgaATGTATGAGCTGCGCTTCCAAAgagtggtttgtttttaatcagtgttCGACTATATTTCTGTACTAATACACTGGCACAGACCCAAGATGTGAAGCCTGGTTCTTGTAACTGTCTAACCTGAATATATGCATAATATCAAGCGGTGTCaaaacttttaattatttaaaatattacttttcttgttgcacttcagttaaataaacatgttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006492 True 1735 mRNA 0.43 4 5986650 5991143

Neighbor

gene id symbol gene type direction distance location
AMCG00006486 NA coding downstream 2359 5979127 ~ 5984291 (-)
AMCG00006481 NA coding downstream 203505 5772245 ~ 5783145 (-)
AMCG00006482 NA coding downstream 288994 5664975 ~ 5697656 (-)
AMCG00006477 NA coding downstream 329529 5653275 ~ 5657121 (-)
AMCG00006472 NA coding downstream 434793 5550817 ~ 5551857 (-)
AMCG00006490 NA coding upstream 3671 5994814 ~ 6001150 (-)
AMCG00006493 celsr1,LOC108427079 coding upstream 60184 6051327 ~ 6067994 (-)
AMCG00006496 LOC106576003 coding upstream 100082 6091225 ~ 6097143 (-)
AMCG00006498 NA coding upstream 200829 6191972 ~ 6217508 (-)
AMCG00006502 NA coding upstream 763638 6754781 ~ 6768791 (-)
G110015 NA non-coding downstream 131148 5853814 ~ 5855502 (-)
G109996 NA non-coding downstream 182198 5803498 ~ 5804452 (-)
G109995 NA non-coding downstream 183389 5802572 ~ 5803261 (-)
G109916 NA non-coding downstream 550886 5434937 ~ 5435764 (-)
G109878 NA non-coding downstream 577079 5409340 ~ 5409571 (-)
G110152 NA non-coding upstream 829095 6820238 ~ 6820568 (-)
G110165 LOC100846954 non-coding upstream 920733 6911876 ~ 6912252 (-)
G110168 NA non-coding upstream 946270 6937413 ~ 6937803 (-)
G110169 NA non-coding upstream 953044 6944187 ~ 6944474 (-)
G110202 NA non-coding upstream 1152111 7143254 ~ 7143678 (-)
AMCG00006476 NA other downstream 382917 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 1709495 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 1809598 4168050 ~ 4177052 (-)
G109633 NA other downstream 1821050 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 1828527 4152816 ~ 4158123 (-)
AMCG00006491 NA other upstream 22961 6014104 ~ 6042924 (-)
G110140 NA other upstream 794170 6785313 ~ 6785851 (-)
G110195 NA other upstream 1087246 7078389 ~ 7107138 (-)
G110507 NA other upstream 2731245 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 2792762 8783905 ~ 8794062 (-)

Expression


Co-expression Network