AMCG00006503


Basic Information

Item Value
gene id AMCG00006503
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 6778367 ~ 6779464 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006503
ATGCTTAACTATGTTTCGGTTCACATTGATGTCACTGCTGCACAAACTGGAGTTTCACGTTTTCTAGAGCTTAACGATAACTGGAGATACGACAAGAGGGAAGATCTTAAACCGGAAGACCCGCTGATGCAGAATTATTCCCACGTGCTGATGGAAGCGGACCCGGCCCACCTGGCTCACTTCGCACAGACTCACCGGACCCTCGCCCTCCTGCCTGGCTTCAGCAAACTCGTCTTCCACTTTTTTGAGTTACCCCCGTTTCGGatcaaactggaaaataaactcGTGCTACTGGAAAAAATCTCGCATAAGACTTGAGCTAgagtgggtggggggtgaggaATGGCATGGTTGATGTTAAGTGTAATATGTAAGTTTACAATTCTGCAAGCCGCTGTATACTTGTTCATAGTGATAtagaacattttatataaagataCAATAAAAGCCAGGGTTTTGTACGATGGTGGAAGCAGAACGCCCTTTGATTGGTTCCccacacagtttttgaaagaATGGTGTTCTGCAAGaagtgtatatagatatattgttTCAAGgagtgttttaattttgaaaagtaaACCTTGCACTGTTTGATAGATagtcttttatatttaaacatatcatGCTACTGAACATTAATAGTAAAATCTAGGGCTGGGATAGACACGACACATCTATGCATCCCTTGGTTTTAGATTCATACAAGAGTTTTTATAATGGGTTTATGTGCTGGTGAGCTCTGCACAGAAAAGTTTCTTACCTGTGGCAAATCTTACACTCTTTG

Function

GO:

id name namespace
GO:0071704 organic substance metabolic process biological_process
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006503 True 787 mRNA 0.41 3 6778367 6779464

Neighbor

gene id symbol gene type direction distance location
AMCG00006502 NA coding downstream 9576 6754781 ~ 6768791 (-)
AMCG00006498 NA coding downstream 560859 6191972 ~ 6217508 (-)
AMCG00006496 LOC106576003 coding downstream 681224 6091225 ~ 6097143 (-)
AMCG00006493 celsr1,LOC108427079 coding downstream 710373 6051327 ~ 6067994 (-)
AMCG00006490 NA coding downstream 777217 5994814 ~ 6001150 (-)
AMCG00006506 pim3 coding upstream 76272 6855736 ~ 6860515 (-)
AMCG00006507 NA coding upstream 218083 6997547 ~ 7004873 (-)
AMCG00006513 NA coding upstream 298856 7078320 ~ 7089125 (-)
AMCG00006512 NA coding upstream 319119 7098583 ~ 7106776 (-)
AMCG00006514 NA coding upstream 407223 7186687 ~ 7195504 (-)
G110015 NA non-coding downstream 922865 5853814 ~ 5855502 (-)
G109996 NA non-coding downstream 973915 5803498 ~ 5804452 (-)
G109995 NA non-coding downstream 975106 5802572 ~ 5803261 (-)
G109916 NA non-coding downstream 1342603 5434937 ~ 5435764 (-)
G109878 NA non-coding downstream 1368796 5409340 ~ 5409571 (-)
G110152 NA non-coding upstream 40774 6820238 ~ 6820568 (-)
G110165 LOC100846954 non-coding upstream 132412 6911876 ~ 6912252 (-)
G110168 NA non-coding upstream 157949 6937413 ~ 6937803 (-)
G110169 NA non-coding upstream 164723 6944187 ~ 6944474 (-)
G110202 NA non-coding upstream 363790 7143254 ~ 7143678 (-)
AMCG00006491 NA other downstream 735443 6014104 ~ 6042924 (-)
AMCG00006476 NA other downstream 1174634 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 2501212 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 2601315 4168050 ~ 4177052 (-)
G109633 NA other downstream 2612767 4164934 ~ 4165600 (-)
G110140 NA other upstream 5849 6785313 ~ 6785851 (-)
G110195 NA other upstream 298925 7078389 ~ 7107138 (-)
G110507 NA other upstream 1942924 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 2004441 8783905 ~ 8794062 (-)
G110570 LOC106576073 other upstream 2218173 8997637 ~ 8999264 (-)

Expression


Co-expression Network