AMCG00006506 (pim3)


Basic Information

Item Value
gene id AMCG00006506
gene name pim3
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 6855736 ~ 6860515 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006506
CTGGGCGTCTAGTACTATGTTAAAGTAGTGCGTTTATTTACAAGCAGATATTTTCCCCCAACAAACTGAGGAAAATTGGATTCCGCCCGTTTTTCGTCACGTCCGATATAGCAGGCGATTTTGACGGCAGCTGAGGGGTTGGCGTGCGGCTGCTGTAGGGCGCTGACGAGTTTAGTGCGGATGGATATATCCGCCCCCTCCACGCGTCAAAATAGTGGAGTTAAGAAGTAGAGGCGAGCTAGACCGGGCTCAGAGTGGCGGAGACAGTGAACCAGGACACAGCTTGCTTTATTGTGCATTGCTTACCGGTGCTGTTTTAGGtctatttcacatttgcatACTTTTGTGGAAAgcctgtttttttgtattcatcgCCCATACGGATCTATACGTGCAGCTCATGAGAAGCACCGCTGCGTTTCCCCGTCTCTCGCCGTCCCTCCTGTCGGATTTACAGCGCTGACGGATTGGAGCACTCCGGGAGGTTTCCTGCCTCTCCTGATTACTGGTGTGTTTTCTCTGGGATTGCATTGCCCTGCACTGGCTGGCGCGGACTTTTGAACACAAGCGAGGGATTTATCCTGTTTTTCGGAGCGACGCCGGTGCGAGATGTTGCTGTCCAAGTTCGGCTCTCTGGCTCACATTTGCAACCCGACCGGCATGGATCACTTACCAGTGAAGATCCAGCTGCAGCCAGTGAAGGTGGAGAAGGAGCCCTTTGACAAGGTCTACCAGGTGGGGTCTGTGGTGGGCAGCGGCGGCTTCGGGACCGTCTATGCCGGCAGCAGGATTTCGGACGGTTTGCCGGTCGCGGTGAAGCATGTGGCCAAAGAGAGGGTGACGGAGTGGGGCTCTATCAACGGCGTCATGGTGCCCTTGGAGATCCTGCTGCTGAAGAAAGTGGGCAGCGCGTTTCGGGGGGTCATCCGGCTGCTGGACTGGTACGAGCGGCCCGACGGCTGGCTCATCATCATGGAGAGGCCCGAGCTGGTCAAGGACCTGTTCGACTTCATCACGGAGAAGGGCGCCCTGGACGAGGACACGGCCCGGGGCTTCTTCCGCCAGGTGCTGGAGGCGGTGCGGCACTGCTACGGCTGCGGCGTGGTGCACCGGGACATCAAGGACGAGAACCTGCTGGTGGACCTGCGCAGCGGCGAGCTCAAGCTCATCGACTTCGGCTCCGGCGCGCTGCTCAAGGACACGGTGTACACGGACTTCGACGGCACACGAGTGTACAGCCCGCCCGAGTGGATCCGCTATCACAGATACCACGGGCGCTCGGCCACAGTGTGGTCCCTGGGCGTGCTGCTGTACGACATGGTGTGCGGAGACATCCCATTCGAGCAGGACGAGGAGATCCTCCGCGGCCGGCTGTACTTCAGGAGGAGGGTTTCTGCCGattgtcAGCAGCTGATAAAATGGTGCCTTTCTCTGAGGCCTTCCGACAGACCCACACTGGAGCAGATTTTTGATCACCAATGGATGCGTGTAACGGAAGCCGTGAAAGTGGAAGACTGTGACATCCAGTTGAGGACCATTGACACCGATACCTCAAGCACAAGTTCGAGCAAAGAGAGCCTTTGAGGGCCCCGGGTGACCTAATAAGGCCTGGGGGGCCACATGCCAAGAACTCCCAGGCTGCCTCTGCTGACTGTGTGGGGTTGGGTGGGATGCTTACTTCACTTTCTGCAAAATTGaaccttttgttttcctttttgtaggGAACTGTAATTTCTATTTCTGGTTTCTGctcccttttttaaattataaacccAGTTTCCTCGTGGGGAACGCTTGCTGTTTCAGGGAGTGCCAGGCcagtgcttttttaatttttttatatataatttattttattttgtaccgATGCTGGTTTATTCACCTGGTGACCCTCCTAAACAGAACTGCAGACTTTGCTCTCATAGAGCCGTaactagttttatttaaatgttttaattttgcttttgagtGCCTTTTGAAAGCTGCTAATGGGGCTTTCCTCATTTGTAActgttgcatgtttttgtttcgtTTCTTCAATTGCACAGAGGGGCATCCTAGGAATTCTTTATTCCGGTTTGTGCAAGTGCGAATGTGCTCAGTTTCAGATGAAAAGGAGCCCCGTTCACTGGTGATTGAATACTTGAAATGCAGACCCATTCAGAAATACTGAACCCCTTTTCTTTGCTGCTCAAAATTTCTTCAGTCTGCACAGAAGTGTGAAAGGTAGATGttgaggctttttttttttttttttcttttcctccatGTATACTGAAGACTTCCACTCCCCTCCCATCTCTACCACTGGGCTCAGAGTCCCTACCTCCCCTTCTTCCATCAAACTGCAGATCGTACGTCTGTCAGGCCAAGGCATGGCAGGGCATGGTTGTAGGATGCACAATCAATGCAATATTCATGGTCTCggttatatatctatatatttttacaacCTGTATAGTGTATTtatgtacttttgtttttctctccatgtattttatttatttgtgtaatttagaCATTCCACAGTTCCCCTCTgtggctatttatttatttatttttatttctcttcccagaatgaaaatgtgtatgttcatggcctttgttttcttttcctgtaaCTTTTAAGACCGCCCGCTGTCCGCTGCTTTCAGGAGCTGGACGAGGTTGTGTTGTAGAAAAGTTTACTTTCTTCGGAAGGGCAgcgaatgtttttatttagttcagATCCTCGGCGACAGACCTTGGATGAGTGTAACTGAAATGTACAGTGATGCTGTTTGGATAAGGGTTTTAAATTTAGTGAAGTTGTATAGTCTCCATTAATTGAATGCTAGAATGGCAACACAATTTATTTCACCAACTGTGTGCTAGGTATGGTTGCATTCATGCAGCTTGAATTTGGAAATATTTCCTACCCCCCCAATTTAGCAGTGTGAAATACAATGATggagaacatatttttttatacagaaatttcaattaaaattcttttttgtatataaatgcaGAGTGGTCTTTCATTTATGCAAATGCAACATGAGTGCTTACATGGGttgaatgttaaacaaatgacctttatgcaataaaatgtagtttCATTTGAACATGCAGGACAA

Function

symbol description
pim3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human PIM3 (Pim-3 proto-oncogene, serine/threonine kinase).

NR:

description
PREDICTED: serine/threonine-protein kinase pim-3

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08807 PIM3; proto-oncogene serine/threonine-protein kinase Pim-3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006506 True 3119 mRNA 0.48 6 6855736 6860515

Neighbor

gene id symbol gene type direction distance location
AMCG00006503 NA coding downstream 76272 6778367 ~ 6779464 (-)
AMCG00006502 NA coding downstream 86945 6754781 ~ 6768791 (-)
AMCG00006498 NA coding downstream 638228 6191972 ~ 6217508 (-)
AMCG00006496 LOC106576003 coding downstream 758593 6091225 ~ 6097143 (-)
AMCG00006493 celsr1,LOC108427079 coding downstream 787742 6051327 ~ 6067994 (-)
AMCG00006507 NA coding upstream 137032 6997547 ~ 7004873 (-)
AMCG00006513 NA coding upstream 217805 7078320 ~ 7089125 (-)
AMCG00006512 NA coding upstream 238068 7098583 ~ 7106776 (-)
AMCG00006514 NA coding upstream 326172 7186687 ~ 7195504 (-)
AMCG00006520 phtf2 coding upstream 732772 7593287 ~ 7621049 (-)
G110152 NA non-coding downstream 35168 6820238 ~ 6820568 (-)
G110015 NA non-coding downstream 1000234 5853814 ~ 5855502 (-)
G109996 NA non-coding downstream 1051284 5803498 ~ 5804452 (-)
G109995 NA non-coding downstream 1052475 5802572 ~ 5803261 (-)
G109916 NA non-coding downstream 1419972 5434937 ~ 5435764 (-)
G110165 LOC100846954 non-coding upstream 51361 6911876 ~ 6912252 (-)
G110168 NA non-coding upstream 76898 6937413 ~ 6937803 (-)
G110169 NA non-coding upstream 83672 6944187 ~ 6944474 (-)
G110202 NA non-coding upstream 282739 7143254 ~ 7143678 (-)
G110204 NA non-coding upstream 285042 7145557 ~ 7185532 (-)
G110140 NA other downstream 69885 6785313 ~ 6785851 (-)
AMCG00006491 NA other downstream 812812 6014104 ~ 6042924 (-)
AMCG00006476 NA other downstream 1252003 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 2578581 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 2678684 4168050 ~ 4177052 (-)
G110195 NA other upstream 217874 7078389 ~ 7107138 (-)
G110507 NA other upstream 1861873 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 1923390 8783905 ~ 8794062 (-)
G110570 LOC106576073 other upstream 2137122 8997637 ~ 8999264 (-)
G110605 NA other upstream 2684980 9545495 ~ 9560104 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_024190 pim3 coding NC_007136.7 CM002909.2 29662411 ~ 29666902 (+)