AMCG00006510


Basic Information

Item Value
gene id AMCG00006510
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7016819 ~ 7029460 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006510
gaaGACTTAGAGTCTATGTAGCCGATCTGTATTTCTAGTATCAAAAAAAGTGGGAGATAAATATGATATAACTGCTTTGAGTTGTCTATAttctatttatatgtttttctatttttactcAATGGTCATATATTGCAGGTCAACAATGGCAATGGCTGGAAAGGGTTCCTGTCCCCTGATCACCATACAGCCCTCAAGAGGACTCATAGATGAGAAGTTTCAAATCACTGTGAAGAATTTACTGCCAGGACAAGCCGTCACCCTGCACTCTCTGACTCAGTCCGAGGACAGTGACTTCTGGGAGGCATTTGGGCACTATGTCAGTGACGGTAAAGGGACAGTGAAAGTCGCTGAAGATGTGAGTCTAGGAGGCTCGTATGATGGCCTTGAGCCCATGGGTCTGCTGTGGAGTATGAAGCCAGCGCCTGGAAGTAGACCAGGACTTAGGTTCCGAAAGAAAGATGTGAATACCCCACTGGTTATGCGCATTTATGTGTATAAAGGGCATATGAGGGATGGATTCAACGCAGAGTCTGCTCTGGCCTGTGCCGTCACAGAGCGCTCGTACATGGCACCAGGTGTCCGCAGGACTGAGATCAGCCAGGATGGCGTCTTAGGAACCCTCTTTGTGCCACCAGGTCCTGGCCCTTTTCCTGCGGTTCTGGACATGTGGGGCGGCGGAGGAGGTCTGGTTGAGTACCGCTCTGCTCTCCTCGCGTCTCATGGCTTTGTCTCTCTGGCTTTGGAGTATTTTTCTTCCAGAACCATGGGAAATGCCTCTGAGAAGAATCCTTTAACTGGAAATGAATATTTCGAGGCAGCCTTCATCATCCTGAAGGAGCATCCACAGGTGGCCAGTGAATGGGTGGCCTTGCTTGGTTTATCCTTCGGGACATCTGTTGCTCTGGGAATGGCTGTATACTCAAGTGTCATACAGCCCAGCTGTGTGGTGTGCATCAGTGGCAGCCATGTTCAACCTGTAAAGGAATCAATTTCCGGTGTCTTTGCAGAGTTTGGCAAGAACGTTCATAAGACTCGCTATGATGAGAACAATTACGTGATCTGGAGGGATCTCCTTTTGCCAATCCCTACAGATCCAAACAAGAAAGTGGATCTGGGGAGGATAAAATGTCCTCTGTTATTGATTGTTGGAGAAGATGATCAGAACTGGCCAGCTGCAGAATCTGCAGAAGATCCCTCAAGAGGACTCATAGATGAGAAGTTTCAAATCACTGTGAAGAATTTACTGCCAGGACAAGCCGTCACCCTGCACTCTCTGACTCAGTCCGAGGACAGTGACTTCTGGGAGGCATTTGGGCACTATGTCAGTGACGGTAAAGGGACAGTGAAAGGGCACATCGGGGATGGATTCACAGAGGCGTCTGCTCTGGCCCGTGCTGTTACTGAGCGCTCGTACATGGCACCAGGCGTCCGCAGGACTGACATCAGGCAGAGTGGAGTCCGAGGAACCCTCTTTGTGCCACCAgGTCCTGGCCCGTTTCCTGCTGTTCTGGACCTGTGGGGCAGTGGAGGACTGGTTGAGTACCGTTCTGCTCTCCTCGCATCTCATGGCTACGTGTCTCTGGCTTTGGACTATTATTCTACGCAAGTCATAGCAAAATCTCCTGATAAAAATCCTTCTCTTGGATATGAGTATTTTGAGGTAAATCAAAATTGA

Function

GO: NA

KEGG:

id description
ko02010 ABC transporters
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006510 True 1678 mRNA 0.49 11 7016819 7029460

Neighbor

gene id symbol gene type direction distance location
AMCG00006505 NA coding upstream 223651 6786854 ~ 6793168 (+)
AMCG00006504 NA coding upstream 233455 6777971 ~ 6783364 (+)
AMCG00006500 tbc1d22a coding upstream 681976 6287734 ~ 6334843 (+)
AMCG00006499 tbc1d22a coding upstream 749683 6254988 ~ 6267136 (+)
AMCG00006497 NA coding upstream 782666 6222817 ~ 6234153 (+)
AMCG00006511 NA coding downstream 28178 7057638 ~ 7058515 (+)
AMCG00006508 NA coding downstream 79884 7109344 ~ 7116757 (+)
AMCG00006509 NA coding downstream 119845 7149305 ~ 7183103 (+)
AMCG00006515 gnai1,LOC107386448,LOC108279833,LOC107590838,LOC100706147 coding downstream 196673 7226133 ~ 7235139 (+)
AMCG00006516 magi2,LOC107554949,LOC107574163,LOC107753655,LOC107661469 coding downstream 260544 7290004 ~ 7290669 (+)
G110167 NA non-coding upstream 79155 6937244 ~ 6937664 (+)
G110161 NA non-coding upstream 158821 6855880 ~ 6857998 (+)
G110147 NA non-coding upstream 220825 6795749 ~ 6795994 (+)
G110081 NA non-coding upstream 796733 6218531 ~ 6220086 (+)
G110024 NA non-coding upstream 1032569 5983790 ~ 5984250 (+)
G110201 NA non-coding downstream 113807 7143267 ~ 7143659 (+)
G110240 NA non-coding downstream 210626 7240086 ~ 7240557 (+)
G110245 NA non-coding downstream 297570 7327030 ~ 7333170 (+)
G110243 NA non-coding downstream 563827 7593287 ~ 7633119 (+)
G110286 NA non-coding downstream 665094 7694554 ~ 7695513 (+)
G110163 LOC100846954 other upstream 104565 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 428420 6519865 ~ 6588399 (+)
G110023 NA other upstream 1033910 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 1882104 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 1909797 5094271 ~ 5107022 (+)
G110279 NA other downstream 624212 7653672 ~ 7655194 (+)
G110445 NA other downstream 1146300 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 1681290 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 2534492 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 5116285 12145745 ~ 12323278 (+)

Expression


Co-expression Network