AMCG00006514


Basic Information

Item Value
gene id AMCG00006514
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7186687 ~ 7195504 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006514
ACCCATTGAGTACAGGTATATGACAATCAGAAACACACCCAACGCCCTCCTTTTTCTGCAGAGGTTCTCTGCCACACACATGGACTAAGCAGCCAAGGCAGAAAACCAAGGATGTGTAAGAAGAGATCCTGTCTGATTGCAGGGGCCGTGGTCAGTGGATTGGTAGCCATCCTCGGAGGGATCCTAATTCCCATTGGGGACTCCATTATCGAGGGCACAGTAAGAAAGgaagttgttattgaaaatggaacCATTGCATACGAGACTTGGGCAGGAACAGTCGGCTCGGTGTACCGGCAGTTTTGGGTGTTTGATGTGCAAAATCCGGAGGAAATAATAAAGAATGGATCAAAGCCCATTGTTGTTGAAAAGGGACCATATACATATAGGACCCGGTACTTGCCAAAAGCaaatataacagaaaacaacaataatacaatctcCTTCCTCCTGCCAAACGGGGCTATTTTTGAGCCGAGCCTGTCCATAGGATCTGAAGATGACAAAATCATGTCTCTTAATCTCGGCCTTGCAggTGCTTATTCTCTCATCAAGCCCTCAGAGCATTTTGTTCTGAACattctaattaaaaatacaaactctTCACTATTCCAGCACAGGAGTGTAAAAGAGATCCTCTGGGGGTATAAAGATCCCTTGTTGTTGAATTCTACTACAGGTCTTTTTGTACCAtatAATGGCACATTTGATGgatattataatgttttcacTGGAAAAGATGACATCAGCAAAACAGCAATAATTGACAAATGGAGAGGAGAAAGCCATGTGTCCTTCTGGAATAACACCTACTGTAACATGATTAATGGCACAGATGGAGCCTCGTTCCCACCTTTTCTAGACAAGAAGACGCCATTATACTTCTTTTCGTCTGACATTTGTAGGTCGGTGTCAGCCGAGTATGAAGGCACCAAAGACTTGAAGGGGATAACGGTCTATCGCTTTATGCTTCCATCCAAAACCTTTGCGTCGCCTACGGTCAACGCGGACAACAGATGCTACTGCAGCAACGACTCCCCCGTCGACAAGAACTGCACGTTGGCCGGTGTCCTTAATGTCAGTCCATGCAGAGACGGTATGCCAGTTTTTATCTCCCTTCCACATTTCCTGTACGGTAGTAAGTCCCTTAGCGAAGCAATAGATGGAATCAGCCCAGATGAGGATCATCATTCGACCTTTCTTGATGTGGAGCCGatcaCCGGCTTTTCCATGAGGTTTGCCAAAAGACTGCAAGTCAATTTAGCATATGGACCTTCAAAGACTATTGATGTGCTGAAAAACATCAAAGAGCATATTGTGTTCCCCGTGGTCTGGCTTAACGAGACAGCAGCTCTCGACGATGCCTCGGCCGAGGAATTCAAGGCATCTTTGACGTCTCGGGTGGAGATGCTGGAAAACGTGCAGATGAGTTTAATTGGCATTGGATGTGTGCTCTTCCTGGGTTTCGCAATTTCACTGTGCGTGCTTAGCAGATCAGaTGGTTTTAAGGCATGAAGCTTTTGAACTGAAGGACATAATCCAGGAACAATCCACTACAGATATCTGCAATCACAACaggcagaaaaacaataaagtacAGTGCCAAGAAAGAAGAACTTTTAAGAATGATCTGAAAGATGATTATTGTGATGTTCACAGTGACTTCACATACAGTGTTGTACCTCGAAACTGATCACAGAGAGTTGGTGAAACTATGAGAAAGAATCATATTCTGGAACTGTGGTTAAAATATCAGCCAAGACCTACTTGACAGTTGCTCTGCAAAGATTAAATCCCTCTCAACGAATAAAACTCAGAAAGAATGCTGCCACATCTGATTTCGCCATTAGTGTCTTTTCATGAAGGAAAACGTTGTTGAACAGATAACATTTCCAGACCCTCTCCTGTCTTTATGGGCCATCAAACACTGTCACTGAAACTCTTCTTTCGCTTCACATTCTCCCATTCTTTCATGCTGCTACTCAACAGCACATAAAAGACAGGCTCGGTTTTAAGTATAAATTCAAGATTTGTACGTTCCCATCTTTGGACCATAACGGTCAATATTGGGGAAATCCACTCACTGATTTATTCGTACATGTAGCTGATTTAATTGCTTACAAACCACTGAGTTGCAAATGTTGAAGTGtattaaaaccacacacacaaaaaaatgcagttgaCGTACCCATGACACACATGACACACTATTAGTGAAAGTGCAAGAACAGGAAATGCTCAAAGCCTTAAGCCATACATCAGCAAATTAGTTAATGGATGCAGTGGAGACAGAAATACCCTGGTGATTAATATCTTAATTAAGGGCTAATACCATTAAAGTAGATTCCTGCTTATTATCATTGATGCAAGAAGAAGCAGTCCTATGGAAGACATTTTGGAAACTGTTAGGAAAAAATCCTTTACATGTGGTTATTGTGTTCTTTGCAACAATGAACATTAAAGCAGAGAGAGATGATCACACATTACAATACTGGGGACCGATtgatgaattaatgaatgaatgaatctgCACTTAGCATAGGAATAACACTCAAAGTCCGAATGCACTTCCTCTCAGTTCTGATGGGAGCTCACACGTATGGCAGGTAAGGTTAAGGTTAGGATCATGGTCAGGGGCAGGGTTATAGACTAGGGTTTGGGTTAGGGCTTCAAGATGTGACCTATATCAGAGCTGAGGTGAAGGGCATGAGATATGCACGTGTTATGCATttggtattcatacatttattcatCAAGAACTGTGCTTTTAATTGTCAAGTCTTCCCTGGAAGTTATTGCCGACTTTCATTGCAATCTAGCTGCAAAAATCTCTTCCTGAGCTTTTAAGGTGTTTCTTGTGTCATCTATAACTCAGAAAAGACCAGAAATAAGAACATCTAAACCCAAGAACTACATAGCCACAGACTCTTGTATAAACTTCATGAGCAACCTCAATACTTTCTTCTGTTGCAATAGACATTTCCATTCTGTGCTTTGAAATAAAACTTTCTCCC

Function

GO:

id name namespace
GO:0042221 response to chemical biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K06259 CD36; CD36 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006514 True 3014 mRNA 0.42 13 7186687 7195504

Neighbor

gene id symbol gene type direction distance location
AMCG00006512 NA coding downstream 79911 7098583 ~ 7106776 (-)
AMCG00006513 NA coding downstream 97562 7078320 ~ 7089125 (-)
AMCG00006507 NA coding downstream 181814 6997547 ~ 7004873 (-)
AMCG00006506 pim3 coding downstream 326172 6855736 ~ 6860515 (-)
AMCG00006503 NA coding downstream 407223 6778367 ~ 6779464 (-)
AMCG00006520 phtf2 coding upstream 397783 7593287 ~ 7621049 (-)
AMCG00006522 rsbn1l,LOC108279531,LOC107569939,LOC106561326 coding upstream 460348 7655852 ~ 7666518 (-)
AMCG00006524 NA coding upstream 472116 7667620 ~ 7688311 (-)
AMCG00006523 NA coding upstream 499036 7694540 ~ 7718823 (-)
AMCG00006526 NA coding upstream 588516 7784020 ~ 7801047 (-)
G110204 NA non-coding downstream 1155 7145557 ~ 7185532 (-)
G110202 NA non-coding downstream 43009 7143254 ~ 7143678 (-)
G110169 NA non-coding downstream 242213 6944187 ~ 6944474 (-)
G110168 NA non-coding downstream 248884 6937413 ~ 6937803 (-)
G110165 LOC100846954 non-coding downstream 274435 6911876 ~ 6912252 (-)
G110259 magi2,LOC107101701 non-coding upstream 288638 7484142 ~ 7484368 (-)
G110261 NA non-coding upstream 293754 7489258 ~ 7489469 (-)
G110262 NA non-coding upstream 311595 7507099 ~ 7507347 (-)
G110263 NA non-coding upstream 326057 7521561 ~ 7522382 (-)
G110267 NA non-coding upstream 355355 7550859 ~ 7551107 (-)
G110195 NA other downstream 79549 7078389 ~ 7107138 (-)
G110140 NA other downstream 400836 6785313 ~ 6785851 (-)
AMCG00006491 NA other downstream 1143763 6014104 ~ 6042924 (-)
AMCG00006476 NA other downstream 1582954 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 2909532 4270416 ~ 4277155 (-)
G110507 NA other upstream 1526884 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 1588401 8783905 ~ 8794062 (-)
G110570 LOC106576073 other upstream 1802133 8997637 ~ 8999264 (-)
G110605 NA other upstream 2349991 9545495 ~ 9560104 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other upstream 2891771 10087275 ~ 10107285 (-)

Expression


Co-expression Network