AMCG00006528


Basic Information

Item Value
gene id AMCG00006528
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7846969 ~ 7858791 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006528
CGCTGCTCTCAGTCCTCGGCGAACGAGCTGAGCTCTCATGACAGAACAAAGGGACGCGCAAAGGACCAACCTGCGTGCAGCCTGACAGGTCCAAATAGATGATTTTGTGGCAGCCTTTCCCGGTGACCAGggcgCACAGCTGCAGCTCATCTCTACTGGAGCCAATTACTGTGGGCTATCTGAACTCCACTTCCAGAAGGGTTCCTTCCCGTTTGCAGCTGTCACCAGTGACCAGTTTCAGCTGGATCCCACAATGCAAGTGATTACCGCAGTGCTGCTGGTCCTGCTGCTCCTCGGGTCTGCCGAGCTGAAAAGGATGAGAAGCGGCGGCGGCGGTGGGGGCAGGAGCCGGTCCAGGGGCAGGTGGGCCGTGGCCAAGCGCTTTGCCGAGCAGGAGTGTAAAGATTACTCTGAGCTGGGGGAGATGTTCCTGGACTGCCAGGAGAAACAACTGACTGAAGTCTACCCTGGGTGGTCGGAAGACACCGTTCACTTGCTGCTGGCCAGGAACCGGATCCGAGTGCTGAAGGACAATGCCTTCGCGCAGTTCAAGAATCTGAAGAGCCTGGACCTACAGCAAAACGATCTCTCGGTGATCGAGGAGTCCGCCTTCGCCGGGCTGTACCGCCTGACCACGCTGCTGCTCCAGCACAACCGGCTGCGCGTGGTCTCCGAGGAGGTGCTCATCTCCCTGCCGCGGCTCAAGTACCTCCGCATCTACGACAACCCTTGGAGCTGTCAGTGCGATCTGGAGAGCTTGGTCAGGAAGCTGCAAGTCCCCAGCAACCGCAACCTGGGGAACTACGCCAAGTGCACCGAGCCCGCTAACCTGAAGGGCCAGAAGCTGAGGAAGCTGAAACCGGAGCTGCTGTGCCCAGAGCTGGAGCCTCAAGAGCCAGGGACAAAGATGCCAGAAGCTCCAATCAAAAGGAAGAAAGAGCCCGACTCCACGACCTGCAACACCTACATGTTCCCCAAGCCGCTGCTCGATTGCCACGGCAGAGATATCGTTAAAATTGACCTCTCAGGAAACAGAATCAAGCAGCTCAAATCCAAGGAGTTTACTGATGTGAAGGACCTGAAATTGCTGAACCTCAGTAGCAACAACCTGGACTATATtgacacagCTGCCTTTAATGGGCTTCTGCATCTGCGAGAGCTGGACCTCTCCAACAACAGTTTGCAGTTCTTTCAATATGGAGTTTTGGAAGACCTGTACTTTGTCCAGAAGCTGGCACTGGGCAATAACCCCTGGAGATGTGACTACAACATTCACTACCTGATATACTGGCTGAAGCTTCACTTTAACGTGCATTACAGCGGCCTTGTTTGTAGCTCCCCAGAGGAGTTCAAAGGCTGGCTGGTGGAAGATTATGTCAAAACATACAACGGGGAGTGTCCGAAAGACAAACTGCAAGGGCAGGGTGAGAACGGCGTGGAACTCATTGCAGATGCTGCGGACGACGAGGAAATAGATTATCAGCCCCAGCATCTAAGAGCACCCAAGAAATTTAACATTATCAGATTGAGttaaaaagaaacagcaaaaaacaatgtaaattacctttcccacccccccccccaagttttttatgtttttgtctaGAAATATCCAAATCAGTCTGTATCAGATGACAAcctgcttcttttttttaagaattttcATTCCCTCCCTATTACTATGACTAGTGTGTTGGAGGCtgggtttgttgttgttgttgttgtaatatttCATACTGCacattattcatatataaagtttttttttca

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006528 True 1770 mRNA 0.52 4 7846969 7858791

Neighbor

gene id symbol gene type direction distance location
AMCG00006530 NA coding upstream 16939 7818672 ~ 7830030 (+)
AMCG00006525 LOC106596391,LOC107735413 coding upstream 34574 7807554 ~ 7812395 (+)
AMCG00006521 NA coding upstream 64099 7760814 ~ 7782870 (+)
AMCG00006519 NA coding upstream 194775 7651790 ~ 7652194 (+)
AMCG00006518 NA coding upstream 269696 7541813 ~ 7577273 (+)
AMCG00006532 NA coding downstream 14283 7873074 ~ 7877171 (+)
AMCG00006534 pmpcb,LOC106576546 coding downstream 37396 7896187 ~ 7899991 (+)
AMCG00006535 psmc2 coding downstream 48903 7907694 ~ 7911362 (+)
AMCG00006531 NA coding downstream 77592 7936383 ~ 7950980 (+)
AMCG00006529 smo,LOC106609777,LOC104956154 coding downstream 96235 7955026 ~ 7966534 (+)
G110286 NA non-coding upstream 151456 7694554 ~ 7695513 (+)
G110243 NA non-coding upstream 213850 7593287 ~ 7633119 (+)
G110245 NA non-coding upstream 513799 7327030 ~ 7333170 (+)
G110240 NA non-coding upstream 606412 7240086 ~ 7240557 (+)
G110201 NA non-coding upstream 703310 7143267 ~ 7143659 (+)
G110361 NA non-coding downstream 55059 7913850 ~ 7914828 (+)
G110429 NA non-coding downstream 229246 8088037 ~ 8090127 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding downstream 274304 8133095 ~ 8135492 (+)
G110444 NA non-coding downstream 314537 8173328 ~ 8175573 (+)
G110446 NA non-coding downstream 319730 8178521 ~ 8178728 (+)
G110279 NA other upstream 191775 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 934715 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 1258570 6519865 ~ 6588399 (+)
G110023 NA other upstream 1864060 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2712254 5127357 ~ 5134715 (+)
G110445 NA other downstream 316969 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 851959 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 1705161 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 4286954 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 4761271 12620062 ~ 12651815 (+)

Expression


Co-expression Network