AMCG00006530


Basic Information

Item Value
gene id AMCG00006530
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7818672 ~ 7830030 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006530
CGCGCATCTCACAGAGAAACTGCCGTGTCTTGCAAGTGCACGCTTTAATAGGCGGTCAAATGTACTGTTCACCGGCTGCCCAACAAGACAGTGCTGATTTTAGACGCACTTGGGTGGCCTGCGTCTAATGAATGCACCCGTTTGGTCCGACCTATACACATCCAGACACGGAGAAACGCCCTTACTGTACACGTAGACGCAAAGCAGGCTGGTCATTGTAGTCATTGGGTTACATAACGTGGGATTGAACGCACCGCAAAAGACAGAAACACGCAAGAACTGCTGCGGAAGAGAAGTTTCTACACTAATACCGATATAACGATATAATGCAAGTTATTGATACGAGCTTGCTTTAGATGCCAGTCCGCTTCCTCACAACTGTAAACTCcaaatcccagaatgcaccacTCTCCCAAGTGGAGGAAGGTCTGCGGGACTGTTTCCAATGTTTTGTAAACGCAGCTTCATGCTTTGCTGGAGTTTTGCATTATCGGGGAGGGGGGGACTAATCTAAATACAAAAGTCACCGTCCATCATGAGCAGCGTGTCGTGCGGCGCGACGCCCAGGCTGTACCGCGGCGTGTGCAGGGAGCTCCGGCGGTGGAGAGCATGGGCAGACTGCCGGAGCGAGTGCTTCCCGACACCCAGCGCCCACAGACCCGTGTCGACCACGGCGCCTCGGCCGCACGGCGAGCTGAACAAGCCCCTGAAGCAGTGGACTCTGATCGTCAACCCCTTCAGCACCGTGACCGTCAAACTGCCCTGCAACGTGTTCGTGCGGCCGCTGGACCCGCACACCTTCCCGGAGGCCAACCGGGCTTTCGTCACGGTCCGAGGCACCAGCGCCGACCAGGGGCTCAAGCTGGACCACATCTCCGTGAAGTACGACGAGTCGGACCGGGAGCTGCTCATCGTGTCGGAGAAGGTCAACAGCAACGTGTCGGTGGAGGTGACGGCGCCTGTGAAAAGCGATCTGTATATTGCAGCGTTAGGGGACGGAAACGTGAAAATCCAAAAGATGGAGTGTGACAACTGCAGAGTATTAACGGAGAGGGGAAGCAGCCTCCTGCAGTCCATCAAGGGTCACAAGGTATTTGTTCAGTCCAAAGGAGGAAACATCATCTGCCTCGGGACCATCCATGGGAACGTGGACATCAGCACAACAGGGGCGAGTAGGGTGGAAATCGCCAAGCTCCAGGGAACCAGCATGAACATTTCTACCGAACACGGGCCGCtgaaagtcaaatacatttacGCGGAGTCGTCTTCTGTGTGCTCCACGTCGGGGAAGATTGAACTGGGCAACGTGCATGGTCAGGCGACAGTGCAGAGTGAGAGGGGAGATATTGTGATAGatgGGTCTGATGGCTACCTCAGGGCTTCTACACATCATGGAGATATAGACGCTTACGTTAACCAGTCTGGAACTGCAGAGTTGAGCAGTCAGCAAGGAGCCATCTCGGTCAGGGTCCCAGCCTCCATGAACGCCAAAGTGCAGTTATCAGGAGCCACAGTGGACATCAGCCCTGAAATTGTCTTGCATGAGACCGAACATATCTCCACAGATGACGGCATCAGTGTTACTGCTCATTTGAATGGAAAAGCTGATGGGAAGAACTGGATCAAAGCCCAGGCTGCAAGAGGGACTGTCAGTCTGAGGAGCCAGAGCTGGTTTGAGTCACTGAAGATTGGGAAGGCATAGTGTTTCATTAGCAAGGATGAGAGAGACCTTTGAAGAGTAACTGCCCATGAGAGTCTCAAAACGCAGAGTTGAGCGAAGAGAAGGACGACAGATGattatagacacacacactgtcactgagaTTGTTTCAGAGAGCGTAGTCTCACCGTCCTCATTGTCACTGCCTTTATGTTTCATCCAATCTTCTGAAAACggtcttatttttgtatgaacAAACATACTAAGCCAATTGTTGtgttatataattaatacaactgttgaGTGGGTCTTCCTTCACCatgtgtatgtctgtttgtCGTCAATCTGGACCGATGTTCTCAATCACAGGACTGACCAAAATCAACGAACTTGAGATTGAAGGGCAGATTCTCTTTTTATTAGAAATGGTGTCTAATCCTGCTCACTAATTCTTGTGCTTCCAGTATCATTCTGTATTACAGACATCATTTCTCACAGGTTTGAGACGGAAAGATGTTCTCATTGTATTCCCACAGCGAGGAGTCCTTATGCACAGCAAAGTCGTTCCAtattcaaaatagtttttatgtGAAATCATAACACATACTGTAGTtagtaagaaatgtaatattctgtTCTGTTGCCAGCATCAGTAAGCTTGGAAATGCCTTTTTTCGGAAGTAAGTATCTCGCAGTTTTGTTAGATAACATGATGTCCCTTACCTGCCAAGAAAACCAAATTTTAAAgctatttctattttattttggtaattggAAGCGGGTCTGTAAAATTAGGTTTCGTAGGCGGTTTGTCCCTGTTTGGTACAGTTGCTTGATACAGCCTGCTGGGAAACACTATAAGGGCATGTAGCTATATGAGCAGGACATGTAAAAGTGTGGACTGAAGGACACGGATGCCTTTGAATTTTAATCTTAGACTATTTCAGCTGTTGCCCAGGttcataataatgttatattttaaactattttactgtaacttgtattaaaactgaaatatataaacagaaatatttttacaatagCAAAATAATGCATGGCTTTGTTTTGCATGTCTTTTTGTTcctgtgttggtttgtttgtttgttatgtgcATCAGAATGGCTGTTTTATTGGACCTATCATTAAAAACAGGCCTACGATGGACCTCTTCTGATCATTGTCATGTGTTCTTGTGTATCATTTCAAAGAGTACGGAGGGTGGGGGGAAGTTAGGGCTGAGATTTTTCACCAAGATGTCAGTTCTCAGTGCAGAGGGGTGCGTGGCACACTGGGTCCTCCGCCTCCCCTTGCCCCCAGGTCTTCCCCGTCTTGTCC

Function

GO:

id name namespace
GO:0051301 cell division biological_process

KEGG:

id description
ko04120 Ubiquitin mediated proteolysis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006530 True 2995 mRNA 0.48 8 7818672 7830030

Neighbor

gene id symbol gene type direction distance location
AMCG00006525 LOC106596391,LOC107735413 coding upstream 6277 7807554 ~ 7812395 (+)
AMCG00006521 NA coding upstream 35802 7760814 ~ 7782870 (+)
AMCG00006519 NA coding upstream 166478 7651790 ~ 7652194 (+)
AMCG00006518 NA coding upstream 241399 7541813 ~ 7577273 (+)
AMCG00006517 magi2,magi2a,LOC107694149,LOC107755877 coding upstream 328534 7484144 ~ 7490138 (+)
AMCG00006528 NA coding downstream 16939 7846969 ~ 7858791 (+)
AMCG00006532 NA coding downstream 43044 7873074 ~ 7877171 (+)
AMCG00006534 pmpcb,LOC106576546 coding downstream 66157 7896187 ~ 7899991 (+)
AMCG00006535 psmc2 coding downstream 77664 7907694 ~ 7911362 (+)
AMCG00006531 NA coding downstream 106353 7936383 ~ 7950980 (+)
G110286 NA non-coding upstream 123159 7694554 ~ 7695513 (+)
G110243 NA non-coding upstream 185553 7593287 ~ 7633119 (+)
G110245 NA non-coding upstream 485502 7327030 ~ 7333170 (+)
G110240 NA non-coding upstream 578115 7240086 ~ 7240557 (+)
G110201 NA non-coding upstream 675013 7143267 ~ 7143659 (+)
G110361 NA non-coding downstream 83820 7913850 ~ 7914828 (+)
G110429 NA non-coding downstream 258007 8088037 ~ 8090127 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding downstream 303065 8133095 ~ 8135492 (+)
G110444 NA non-coding downstream 343298 8173328 ~ 8175573 (+)
G110446 NA non-coding downstream 348491 8178521 ~ 8178728 (+)
G110279 NA other upstream 163478 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 906418 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 1230273 6519865 ~ 6588399 (+)
G110023 NA other upstream 1835763 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2683957 5127357 ~ 5134715 (+)
G110445 NA other downstream 345730 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 880720 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 1733922 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 4315715 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 4790032 12620062 ~ 12651815 (+)

Expression


Co-expression Network