AMCG00006532


Basic Information

Item Value
gene id AMCG00006532
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7873074 ~ 7877171 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006532
ATGGGCGATGGCGGCAGCGTGGCTTCCAGCCCGTGTAACATGAAAGTGCTGCTGGGGTTAGTGGCCGGAGCCGGGGCTTCCTACGGGATATATAAACTGGTTTCTGGCAGAAGAAAGCATGGGAAAAAAGCACAAGGTGACGATCCGACCGATCATGGTCCAAGAAAACAGCCTGCCGCCACAAGGCCTCTACAGCCGGGGACTTTACTGGAAAAGGTGTCCGGGTTGTCGATGGTTCGTGGGACAGGGAGCAGGGCGGCGGGTGTGTCATCATCGGGTAGTCTGGAGCCACAACACCTGGAGATGCTCCTGTCCTTGTTGCAGAGCAGTCCAGACCCATCGGAAAGAACGCAAATCCTGGTCACTTTAGGAAACAGTGCGGCCTTCTCTGTCAACCAGGAACTCATTCGTGACATGGGTGGCCTTCAGATCATTGGGAACCTACTGCCAGATCCAGTGTTTGAAATCAGAGTTCAGGCCTTAAATGCTCTCAATAACCTGAGTATGAATGTCAGAAACCAAGAGCAGCTCCAGGTATATATATCTCAGGTATTGGAGATGATCGAGACTTCTCCTGTGAACTCGGACCTACAGATGGCCGCGCTGAGACTGCTGACCAACTTGTCTGTCACTAATAATTACCAGCACTTAATGAAGAATTCCATCacgctctgtctgtctctgctggTTGTAGGCAATGAGATATTGCAGgCGCCAGCATCCCTCGTCCTGTTATTCGACAGCTGCACAAACACTGCCGTCCTCCTCCGGGCATTGACCTTCTTGGGAAACATGAAGGACTGGAGGCCCTCCACACCCATCAGGGAGACACTGAACCGCAGCAAAGACTCGCTGTTCTGCGTCCTGTTCGGGGACACGTCGCCGCTGCACAGGAAACTGCCCCTGCTGCTCTCGCACCCCGACAGTGAAGTGAAGGCTCAGGTGGCCAGACTTCTTACCTAA

Function

GO: NA

KEGG:

id description
K24167 ARMC10; armadillo repeat-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006532 True 963 mRNA 0.54 5 7873074 7877171

Neighbor

gene id symbol gene type direction distance location
AMCG00006528 NA coding upstream 14283 7846969 ~ 7858791 (+)
AMCG00006530 NA coding upstream 43044 7818672 ~ 7830030 (+)
AMCG00006525 LOC106596391,LOC107735413 coding upstream 60679 7807554 ~ 7812395 (+)
AMCG00006521 NA coding upstream 90204 7760814 ~ 7782870 (+)
AMCG00006519 NA coding upstream 220880 7651790 ~ 7652194 (+)
AMCG00006534 pmpcb,LOC106576546 coding downstream 19016 7896187 ~ 7899991 (+)
AMCG00006535 psmc2 coding downstream 30523 7907694 ~ 7911362 (+)
AMCG00006531 NA coding downstream 59212 7936383 ~ 7950980 (+)
AMCG00006529 smo,LOC106609777,LOC104956154 coding downstream 77855 7955026 ~ 7966534 (+)
AMCG00006533 NA coding downstream 90820 7967991 ~ 7981094 (+)
G110286 NA non-coding upstream 177561 7694554 ~ 7695513 (+)
G110243 NA non-coding upstream 239955 7593287 ~ 7633119 (+)
G110245 NA non-coding upstream 539904 7327030 ~ 7333170 (+)
G110240 NA non-coding upstream 632517 7240086 ~ 7240557 (+)
G110201 NA non-coding upstream 729415 7143267 ~ 7143659 (+)
G110361 NA non-coding downstream 36679 7913850 ~ 7914828 (+)
G110429 NA non-coding downstream 210866 8088037 ~ 8090127 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding downstream 255924 8133095 ~ 8135492 (+)
G110444 NA non-coding downstream 296157 8173328 ~ 8175573 (+)
G110446 NA non-coding downstream 301350 8178521 ~ 8178728 (+)
G110279 NA other upstream 217880 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 960820 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 1284675 6519865 ~ 6588399 (+)
G110023 NA other upstream 1890165 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2738359 5127357 ~ 5134715 (+)
G110445 NA other downstream 298589 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 833579 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 1686781 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 4268574 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 4742891 12620062 ~ 12651815 (+)

Expression


Co-expression Network