AMCG00006536


Basic Information

Item Value
gene id AMCG00006536
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7880134 ~ 7887109 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006536
ATGGAGGAGAAGCGAGAAGAGGAGCAGTGTCTGGTGGGGCCAGGGGCCAGCGCGGGTGCGAGTGGCTCCGAGGGGCCCGCCGTGAAGCCGCGCTGCAGCTCCTCACAGGACTCGCGCAAGAGCAGCTCCTCCCGCAAGAGCTTCCGCCTGGACTACCGGTTGCAGGAGGACGTCACCAAGTCCCAGAGGGACCGCCACGGCCGATTCATGAACCCCTGGCCCACCTGGAAGTTCCCCAGCTACCCCACCATCCTCAAGAGACTGCTATTTGAAAAGAATAACAGCAACGTCCCCGGCTCCAAAGAGGTGCTGGACAGGGAGCTTCCCGTGGTGGAGCCCTATTTCATCAGCAGCCCGCAGCTGGTGGGCCAGACGGGCTCCGGGCTGCGCGTCACCTGGCTGGGCCACGCCTCGGTGCTGGTTGAGATGGACAAGCTCACCGTGCTGACTGACCCCATCTTCAGCCAGAGGGCCTCACCCGTGCAGTTCCTGGGTCCGAAGCGTTTCCGGGGCCCCCCCTGCACGGTGGCCGACCTGCCCAAGATCGACGCGGTGGTCATCAGCCACACACACTACGACCACCTGGACGCCGGCTCGGTGGCCGCCTTGAACGAGCGCTTCGGCAGCGAGCTGCGCTGGTTCGTGCCACTGGGGCTGCTGGACTGGATGCAGAAGAGCGGCTGCGAGAACGTCATCGAGCTGGACTGGTGGGAGGAGAACTGCGTGCCGGGCCACGACGAGGTCACCTTCGTGTGCACGCCGGCGCAGCACTGGTGCAAGCGCACGCCCACGGACGATAACAGGGTGCTGTGGGGCAGCTGGGCCGTGCTGGGGCCCTGCAGCCGGTTCTTCTTCGCGGGGGACACGGGGTACTGCTCGGTCTTCGAGGAGATCGGGAAGCGCTTCGGGCCCTTCGACCTGGCAGCCATTCCCATCGGAGCGTACCTACCGAGGGACGTCATGAGGTCACAACACGTGGATCCGGAGGAAGCTGTGCGGATTCATATCGATGTTCAGGCCAAACAATCTCTGGGAATCCACTGGGGGACCTTTGCTTTAGCTTACGAGTATTACTTGGACCCTCCTATTAAGCTCAGAGAAGCCATGGAGAGATACGGTCTGAATCAAGAGAACTTCTTTATTCTGAAACAGGGCGAATCTAAGGATCTGAACATTGAGGAAGATGTGTTTGAATGA

Function

GO: NA

KEGG:

id description
K13985 NAPEPLD; N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006536 True 1197 mRNA 0.62 4 7880134 7887109

Neighbor

gene id symbol gene type direction distance location
AMCG00006527 NA coding downstream 31605 7829952 ~ 7848529 (-)
AMCG00006526 NA coding downstream 79087 7784020 ~ 7801047 (-)
AMCG00006523 NA coding downstream 161311 7694540 ~ 7718823 (-)
AMCG00006524 NA coding downstream 191823 7667620 ~ 7688311 (-)
AMCG00006522 rsbn1l,LOC108279531,LOC107569939,LOC106561326 coding downstream 213616 7655852 ~ 7666518 (-)
AMCG00006537 dnajc2 coding upstream 14507 7901616 ~ 7906200 (-)
AMCG00006538 NA coding upstream 26314 7913423 ~ 7925635 (-)
AMCG00006542 klhdc10,LOC107587165,LOC107729855,LOC107690572 coding upstream 94975 7982084 ~ 7993911 (-)
AMCG00006541 nrf1,LOC107584621,LOC107690626 coding upstream 177967 8065076 ~ 8087619 (-)
AMCG00006544 NA coding upstream 200928 8088037 ~ 8090151 (-)
G110309 NA non-coding downstream 123282 7756625 ~ 7756852 (-)
G110271 NA non-coding downstream 311975 7567888 ~ 7568159 (-)
G110270 NA non-coding downstream 312567 7567204 ~ 7567567 (-)
G110269 magi2 non-coding downstream 321666 7558205 ~ 7558468 (-)
G110267 NA non-coding downstream 329027 7550859 ~ 7551107 (-)
G110369 psmc2 non-coding upstream 20449 7907558 ~ 7909228 (-)
G110576 NA non-coding upstream 1123031 9010140 ~ 9014326 (-)
G110594 NA non-coding upstream 1589373 9476482 ~ 9477506 (-)
G110720 NA non-coding upstream 2417822 10304931 ~ 10305247 (-)
G110733 LOC103376870 non-coding upstream 2534452 10421561 ~ 10470060 (-)
G110195 NA other downstream 772996 7078389 ~ 7107138 (-)
G110140 NA other downstream 1094283 6785313 ~ 6785851 (-)
AMCG00006491 NA other downstream 1837210 6014104 ~ 6042924 (-)
AMCG00006476 NA other downstream 2276401 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 3602979 4270416 ~ 4277155 (-)
G110507 NA other upstream 835279 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 896796 8783905 ~ 8794062 (-)
G110570 LOC106576073 other upstream 1110528 8997637 ~ 8999264 (-)
G110605 NA other upstream 1658386 9545495 ~ 9560104 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other upstream 2200166 10087275 ~ 10107285 (-)

Expression


Co-expression Network