AMCG00006544


Basic Information

Item Value
gene id AMCG00006544
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 8088037 ~ 8090151 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006544
CAACTCCGGGTCAACACAAATTTCGCCCCGCCGCAGCAGCCGGGACACAAGTGCGAGAAGAAAAGTTGCAACGAGCCAaccaaaaataagaaacagaaaTCACACAGTGCTGACAAACGGAAAAAGGGCAAAGGGAAGAAGCCGTCCAAAAAGCGATCTGCAAGTGCCAAATCTGCCAAGAGAGAGGTGGACATCCTGAGCCCAGCTGCCATGGAGAATGTAtactacatttcccacaatgcTGTGGACTGCCTGGAGTTCAGGGGCTTTGGCTGGCCAGAATCAGCCAAGAAGAAAGGGAAGAAGgggaaaatggggaaaaaagtgaagggcaaaaaataaatattcatgcATGATTGTGTAAACTCTCTATTGCACAGAAAATAGACACTTAACATTAACTATTACCTTTTTTTCccaaaaaatatacatgcagGTATGAACCTATAGTGGTGGTTTAGCTGATTTTTCAGTAATACTTGtagcaaacaaaacatgtccTTCTGTGACCATGCATTATGTGTTGCTTTACATGATGTAACATTTATGGAACAATGTGTGTACCCTTGTACAATTCATTTGCATTATTCTACATCAAAGACAATATAATAAAGGTTTAATTCAATTCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006544 True 632 mRNA 0.41 2 8088037 8090151

Neighbor

gene id symbol gene type direction distance location
AMCG00006541 nrf1,LOC107584621,LOC107690626 coding downstream 418 8065076 ~ 8087619 (-)
AMCG00006542 klhdc10,LOC107587165,LOC107729855,LOC107690572 coding downstream 94126 7982084 ~ 7993911 (-)
AMCG00006538 NA coding downstream 162402 7913423 ~ 7925635 (-)
AMCG00006537 dnajc2 coding downstream 181837 7901616 ~ 7906200 (-)
AMCG00006536 NA coding downstream 200928 7880134 ~ 7887109 (-)
AMCG00006543 strip2 coding upstream 533 8090684 ~ 8120577 (-)
AMCG00006545 LOC107725924,LOC107658882,LOC107583963,LOC107656398,LOC103371314 coding upstream 38728 8128879 ~ 8137211 (-)
AMCG00006548 NA coding upstream 78851 8169002 ~ 8169391 (-)
AMCG00006547 tmem209,LOC102778061 coding upstream 84090 8174241 ~ 8183554 (-)
AMCG00006549 mdfic,si:ch211-262n1.4,LOC107656347,LOC107658868,LOC107584008 coding upstream 329237 8419388 ~ 8424598 (-)
G110369 psmc2 non-coding downstream 178809 7907558 ~ 7909228 (-)
G110309 NA non-coding downstream 331185 7756625 ~ 7756852 (-)
G110271 NA non-coding downstream 519878 7567888 ~ 7568159 (-)
G110270 NA non-coding downstream 520470 7567204 ~ 7567567 (-)
G110269 magi2 non-coding downstream 529569 7558205 ~ 7558468 (-)
G110576 NA non-coding upstream 919989 9010140 ~ 9014326 (-)
G110594 NA non-coding upstream 1386331 9476482 ~ 9477506 (-)
G110720 NA non-coding upstream 2214780 10304931 ~ 10305247 (-)
G110733 LOC103376870 non-coding upstream 2331410 10421561 ~ 10470060 (-)
G110757 LOC103376870 non-coding upstream 2512944 10603095 ~ 10603733 (-)
G110195 NA other downstream 980899 7078389 ~ 7107138 (-)
G110140 NA other downstream 1302186 6785313 ~ 6785851 (-)
AMCG00006491 NA other downstream 2045113 6014104 ~ 6042924 (-)
AMCG00006476 NA other downstream 2484304 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 3810882 4270416 ~ 4277155 (-)
G110507 NA other upstream 632237 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 693754 8783905 ~ 8794062 (-)
G110570 LOC106576073 other upstream 907486 8997637 ~ 8999264 (-)
G110605 NA other upstream 1455344 9545495 ~ 9560104 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other upstream 1997124 10087275 ~ 10107285 (-)

Expression


Co-expression Network