AMCG00006555


Basic Information

Item Value
gene id AMCG00006555
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 8799742 ~ 8807859 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006555
ATGTGCAGGTCATTACGCTACTGTGTCAGTCACTGTCTCTATGCAGCGATGACTAGACTGGAAGAGGCAAACAGGGAGGTTAACATGAGGTCCTCAGTGCGATATCTCGGTTACTTGTCCAGTCTCAACTTACTGGTGGCCATATGCATGGGCCTGTACGTGCGATGGGAGAAGACGGCAGATTCCCTGATCCTGGTGATTTTTATCCTGGGTCTGTTCGTCCTAGGCATTGCAAGTATACTGCATTACTACTTCTCCATGGAAATGGCCAGCCTGAGTCTTTTGCACTTGTGGTTCGGATTTCTGCTGGGTCTCCTGTGTTTCCTGAATAACTCCGCCTTCAAGAGTGACGTGAAGGAGGAGGCCACCAAATACTTGCTGCTGACCAGTATCTTCATCAGGACGTTGTGGGCATTGACGGAGCGGATCTGCGGCTGTGTCCGCTACCGTCCTGCTCTCCTGACCTCTGCCGAATTTCTGGAGCTGGTCGGCTTTGCCATCGCCAGCACCGCCATGCTGCTCCAGAAGTCGATGAGCATCATTCTCCTGGTGCTGGCCTTGGCCATGCTGATCGTTGACCTGCGGATGAAATCCTTCCTGGCATTTCTGAACCTGGTCTGTTTTGCCGTGGTCTCCTCGTTGTTGTTCTTCCCCTCGCTGCAGATCCCCATCAACCCCTTCGCCCTGGCCTGCTACTTCAGCCGACTGATCTGCGACCCCCTGCTTGACGTCTACTTCAGCAGCCTGTCCGCCACCGAGCGCTGGCTGCCCTTCCTCACGCACGGCCGGGTGTGGCGCCGACTGTCCGTCCTCCCCCTGGGCCTGCTGGAGCTCACCTTCTTCGTCCTCGCCGCTTTCAAACTCAGGGATTTGCAGCTGTGGTATTTCGTGATCCCGGGGTTCGCCATTTTTGGGGTCTTCTGGATGATCTGCCACGTTATCTTCATCATCACACTGTGGGGCTTCCATACGAAATTGAACGACTGTCAGAAGGTGTTCTACAGCCAGCGCTCTGAGAACAGGAGTCTGGACCGTGTGATGGCCTCCAAAGGAATGCGCCATTTCTGCTTGATCTCAGAGCGCCTGGTCTTCTTCAGTCTCCTGTCAACGGCCATCCTAGGTGCCGTGTCATGGCAGCCGACCAATGGGATCTTCATGAGTGTGTTTCTGGTGATTCTGCCACTCGAGTCAATAGCTCACGGATTATTTCATGAGCTTGGAAACTGCTTGGGAGGAACTTGTGTGGGATATGCCGTTGTTATCCCCACTAACTACTGCAGCGTGGACGGCCAACCCACCCTGCTGCCGCCCGAGCACGTGCAGCAACTGAACCTGCGCTCGACGGGCATGCTGAACGCCATCCAGAGGTTCTTCTCCTACCACATGATCGACACCTACGGCTGCGACTACTCCACCAGCGGCCTGTCCCTGGACGCCCTGCAGTCCAAACTGAAGGCCTTCCTAGAGCTGAGGACGCAGGACGGACCCAGACACGACACCTACGTCTTGTACTACAGCGGCCACTCGCATAGCTCGGGGGAGTGGGCTCTGGCAGgagGAGATGTGCTGCGGCTCAGTAATGTGCTGGAGTTGTGGAAGGAGAAGAACAGCGATTTATGCTCCAGGTTGATCATCGTGCTGGACTGTGAGAACTCCCTTCCGTGGATCAAAGAGGTGCGCAAGGTGGGTGACCAGTACGTGGCGGTCCAGGGGGCAGAAATGGCCCGAGTTGTGGACGTGGAGGAAGCAGAACCCCCTCAGCTGGGAGACTTCACCTCCGAGTGGGTGGAGTTCAACTGCAACCCCGAAAACAATATCCAGTGGTCGGAGAAAGGGCGGACCGTCACCGCAGCGTACAGCGTGTCCAAGCGGTGGAGTGACTACACCTTGCACCTGCCCACAGGAAGTGATGTCGCCAAGCACTGGATGACATACTTCCCCAGGGTCACCTACCCTCTCGTCCACCTAGCAAACTGGTGCGGAGGCCTGAACCTGTTCTGGGCTTGTGGCGTCTGTCTGCGGTGCTTCAGGAGGCTGAAGCTAAGATGGTTCCCCCCGACAGTGCTTGACACAGGGCAAGGGTTTAAGCTGGTTAAGTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006555 True 2103 mRNA 0.56 4 8799742 8807859

Neighbor

gene id symbol gene type direction distance location
AMCG00006556 bmt2 coding upstream 5683 8746594 ~ 8794059 (+)
AMCG00006558 gpr85,LOC106576049 coding upstream 71416 8727643 ~ 8728326 (+)
AMCG00006551 NA coding upstream 139449 8644242 ~ 8660293 (+)
AMCG00006546 NA coding upstream 555705 8222881 ~ 8244037 (+)
AMCG00006540 ube2h,LOC105888480,LOC107676921 coding upstream 764910 8026690 ~ 8034832 (+)
AMCG00006557 NA coding downstream 66614 8874473 ~ 8885595 (+)
AMCG00006561 dock4,LOC106609220 coding downstream 104421 8912280 ~ 9009240 (+)
AMCG00006560 NA coding downstream 228612 9036471 ~ 9059363 (+)
AMCG00006566 NA coding downstream 666941 9474800 ~ 9476828 (+)
AMCG00006563 bpgm coding downstream 671644 9479503 ~ 9484141 (+)
G110523 NA non-coding upstream 4411 8795060 ~ 8795331 (+)
G110447 NA non-coding upstream 620054 8179441 ~ 8179688 (+)
G110446 NA non-coding upstream 621014 8178521 ~ 8178728 (+)
G110444 NA non-coding upstream 624169 8173328 ~ 8175573 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding upstream 664250 8133095 ~ 8135492 (+)
G110558 NA non-coding downstream 79827 8887686 ~ 8888492 (+)
G110590 NA non-coding downstream 648806 9456665 ~ 9456911 (+)
G110681 NA non-coding downstream 1222567 10030426 ~ 10031846 (+)
G110722 NA non-coding downstream 1561856 10369715 ~ 10369931 (+)
G110849 NA non-coding downstream 2312531 11120390 ~ 11120735 (+)
AMCG00006552 NA other upstream 75676 8710750 ~ 8724066 (+)
G110445 NA other upstream 622956 8175760 ~ 8176786 (+)
G110279 NA other upstream 1144548 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 1887488 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 2211343 6519865 ~ 6588399 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 756093 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 3337886 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 3812203 12620062 ~ 12651815 (+)
G111197 NA other downstream 4203325 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 5125807 13933666 ~ 13939475 (+)

Expression


Co-expression Network