AMCG00006557


Basic Information

Item Value
gene id AMCG00006557
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 8874473 ~ 8885595 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006557
ATGGGCTGCGGTGCTTCTGCGGAGTGCGGGCGAGGGCAGGCGGAGGGTCAGGGCAGGTCATCGCCGTGTCGTGGTGCCTCTGCAGCTCCTCACACAGAAGATGAGCCTGTAGAAGACGCCAGCAAACCaatgcagtgttcaGTCATTGCTGATAATCAGACACAGTCAAGTCATGGCGAAGAGGATATAGAAGGAAAAGATGAAGCCGTAGGAGAAATTGAAAACATGaatgcaGACATTGCTAATAATCAAACACAGTCGAGTCATGATGAAAGGAATACAGTAAAAGATGAAGCTGtagaagaaactgaaaacatgaactcaGTCATTGCTGATAATCAGACACAGTCAAGTCATGGCGAAGAGGATATAGAAGGAAAAGATGAAGCCGTCGGAGAAATTGAAAACATGAAcGCATTCATTGCTGATACTCAAACAGAGTCGAGTCATGATGAAAGGAATACAGTAAAAGATGATGCTGtagaagaaactgaaaacatgaacGGGCTCATACCTTTTCCAGATGAATGGTACAATGAAGGAAGGTTCCTGAATGGAGCATATGAGCTGGTATCCAACCACTGCCAAGCCCCCCCAAGTGGCTGTCATCTTGTAAATACTGAGCCAAATGTCCTGGAAGATGGCCGTGCCGGTGGGCTTTACATCCCAGGAAAAGGAATGGTCATGACATACATGTTGGAGGAAAGAGCCAACGTCTGCAGATACTTCGATGCTTCGTCCGGAACGTGGCTGCTCTTGCCGCTGCAGTGGGAGATGAACTTAGACTTCGTCAGAGAACGGGTCGAGCGAGTAatgGGAGTCCTGCCAGGCCTGGTGGATGAGAAGGAGATCGTGGGAGCCCTCAGACAGTGCAACTATGATTCAGACGAAGtcatttttgtttatctttcCACCTTTGGAGACATTCTTCTGCAGCCACCAGAAGGGGACAGAATTATTGAAGATCTTGAGCAGAAACTGCAAGACAAAGAAAAGGAGATGGATGACTTGGTCCAGAAGAATAACTATCTGTCCGAAGAGTATAGGTACCTGTCAGAGGACTTGCAGCCCTTATATGGTAGAGTGGCCGAGCTGGAGGCAGACAAGGAGGAAGCCAGTGAGAAGATCAGAGCACTGCTGGCCACAAGACCCACCGGCCCTGATGCGGACTTGGCTCCCAAACCATCTGTCAACTCCAGCCAGCTGCTGCAGGTCGGCACGCTGATCAGAGACTTAAACATCGCCAACAAGAGCCTGAGATCCACGGTGAAGCACATGTTCTCCGAAATGGGGCACCAAATGGAGCAGCTGTTGAAGGCGGCACTTCGTATGAAAGAGGCCCAGCAGAATTCCACCACTGACTTCGAGGAGCTCCGCTCTCTGTACCGGAGGGAAGCCATGGAGAGGAAGGCGCTCTACAATAAGCTGCAGGAGCTGTGCGGAAATATCCGGGTGTTCTGTCGCTGCAGGGGTGACTCGGCGGCCGACACCTGCCTGGATGTCCCTTCTGATGAAGAAGTTATTGTAAACCAAAAGGGATCAAAAAAGACGTTCTTCTTTGACAAAGTGTATCCTTCCAGTGCTACGCAGGAAGAAGTGTTTAACGAAGCCCGTGCGATCATCACCTCCTGTGTGGATGGATATAACGTCTGTATACTGGCGTACGGGCAGACAGGCTCTGGGAAGACATACACGATGATGGGTCCCAAAGGAAATCCAGGAGTGAACATCAgGTCAATCAGGGAGCTTTTACATATCTGTAAACAGAGAGAAACGATCACGTATGTACTCAAGatctCCATGTTAGAGATTTACAACGAAAGCCTTAATGACCTCTTAGCCCTAAATCAAACCAGTCAGCTGGAGATTCAGACTCGGGGCAAAGCCGTCACAGTCCATGGCTTGACGCAGATCGAAGTGAACACCGAAGACGACATACTGAACATCGTGGAGCTTGGAGAACAAAACAGAACCACAGCTTCGACCAAAATTAACATTGAGAGCTCGCGCTCTCACCTCATCGTGACCCTCCACGTGGACGGCACAGACAGCGCGTCCGGCGTCACGTCCCATGGCTCGCTCATGCTGTGTGACTTGGCCGGGTCAGAGCGCATCTCCAAGACCGAGGCGACGGGGCAGAGGCTGGTGGAAGCAGCGGCCATAAACAAATCCCTCACGTCTCTGGGGCAGGTTTTCAGCGCTTTGAAGTGCAACGCGCTACACGTGCCCTTCAGGAACTCGAAGCTCACACGCCTGCTTCAGCCTTCGCTCAGTGGAGATGCCAAGgcctgtgtgtttctgaacGTCAGTCCGGACATGAACAACTTGGCGGAGACTCTCAGCACACTTCAGTTTGGTTCCTCAATTCGGCAG

Function

GO: NA

KEGG:

id description
K10406 KIFC2_3; kinesin family member C2/C3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006557 True 2373 mRNA 0.51 16 8874473 8885595

Neighbor

gene id symbol gene type direction distance location
AMCG00006555 NA coding upstream 66614 8799742 ~ 8807859 (+)
AMCG00006556 bmt2 coding upstream 80414 8746594 ~ 8794059 (+)
AMCG00006558 gpr85,LOC106576049 coding upstream 146147 8727643 ~ 8728326 (+)
AMCG00006551 NA coding upstream 214180 8644242 ~ 8660293 (+)
AMCG00006546 NA coding upstream 630436 8222881 ~ 8244037 (+)
AMCG00006561 dock4,LOC106609220 coding downstream 26685 8912280 ~ 9009240 (+)
AMCG00006560 NA coding downstream 150876 9036471 ~ 9059363 (+)
AMCG00006566 NA coding downstream 589205 9474800 ~ 9476828 (+)
AMCG00006563 bpgm coding downstream 593908 9479503 ~ 9484141 (+)
AMCG00006564 NA coding downstream 644638 9530233 ~ 9560060 (+)
G110523 NA non-coding upstream 79142 8795060 ~ 8795331 (+)
G110447 NA non-coding upstream 694785 8179441 ~ 8179688 (+)
G110446 NA non-coding upstream 695745 8178521 ~ 8178728 (+)
G110444 NA non-coding upstream 698900 8173328 ~ 8175573 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding upstream 738981 8133095 ~ 8135492 (+)
G110558 NA non-coding downstream 2091 8887686 ~ 8888492 (+)
G110590 NA non-coding downstream 571070 9456665 ~ 9456911 (+)
G110681 NA non-coding downstream 1144831 10030426 ~ 10031846 (+)
G110722 NA non-coding downstream 1484120 10369715 ~ 10369931 (+)
G110849 NA non-coding downstream 2234795 11120390 ~ 11120735 (+)
AMCG00006552 NA other upstream 150407 8710750 ~ 8724066 (+)
G110445 NA other upstream 697687 8175760 ~ 8176786 (+)
G110279 NA other upstream 1219279 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 1962219 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 2286074 6519865 ~ 6588399 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 678357 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 3260150 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 3734467 12620062 ~ 12651815 (+)
G111197 NA other downstream 4125589 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 5048071 13933666 ~ 13939475 (+)

Expression


Co-expression Network