Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006566 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 9474800 ~ 9476828 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005861 | troponin complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006566 | True | 360 | mRNA | 0.45 | 4 | 9474800 | 9476828 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006560 | NA | coding | upstream | 415437 | 9036471 ~ 9059363 (+) |
| AMCG00006561 | dock4,LOC106609220 | coding | upstream | 465560 | 8912280 ~ 9009240 (+) |
| AMCG00006557 | NA | coding | upstream | 589205 | 8874473 ~ 8885595 (+) |
| AMCG00006555 | NA | coding | upstream | 666941 | 8799742 ~ 8807859 (+) |
| AMCG00006556 | bmt2 | coding | upstream | 680741 | 8746594 ~ 8794059 (+) |
| AMCG00006563 | bpgm | coding | downstream | 2675 | 9479503 ~ 9484141 (+) |
| AMCG00006564 | NA | coding | downstream | 53405 | 9530233 ~ 9560060 (+) |
| AMCG00006568 | NA | coding | downstream | 115564 | 9592392 ~ 9595123 (+) |
| AMCG00006569 | NA | coding | downstream | 155955 | 9632783 ~ 9642065 (+) |
| AMCG00006567 | NA | coding | downstream | 176479 | 9653307 ~ 9656616 (+) |
| G110590 | NA | non-coding | upstream | 17889 | 9456665 ~ 9456911 (+) |
| G110558 | NA | non-coding | upstream | 586308 | 8887686 ~ 8888492 (+) |
| G110523 | NA | non-coding | upstream | 679469 | 8795060 ~ 8795331 (+) |
| G110447 | NA | non-coding | upstream | 1295112 | 8179441 ~ 8179688 (+) |
| G110446 | NA | non-coding | upstream | 1296072 | 8178521 ~ 8178728 (+) |
| G110681 | NA | non-coding | downstream | 553598 | 10030426 ~ 10031846 (+) |
| G110722 | NA | non-coding | downstream | 892887 | 10369715 ~ 10369931 (+) |
| G110849 | NA | non-coding | downstream | 1643562 | 11120390 ~ 11120735 (+) |
| G110883 | NA | non-coding | downstream | 1873056 | 11349884 ~ 11350117 (+) |
| G110916 | NA | non-coding | downstream | 2194741 | 11671569 ~ 11672448 (+) |
| AMCG00006552 | NA | other | upstream | 750734 | 8710750 ~ 8724066 (+) |
| G110445 | NA | other | upstream | 1298014 | 8175760 ~ 8176786 (+) |
| G110279 | NA | other | upstream | 1819606 | 7653672 ~ 7655194 (+) |
| G110163 | LOC100846954 | other | upstream | 2562546 | 6911876 ~ 6912254 (+) |
| AMCG00006501 | fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 | other | upstream | 2886401 | 6519865 ~ 6588399 (+) |
| AMCG00006565 | LOC103366858,LOC103380581 | other | downstream | 87124 | 9563952 ~ 9568276 (+) |
| AMCG00006624 | NA | other | downstream | 2668917 | 12145745 ~ 12323278 (+) |
| AMCG00006636 | NA | other | downstream | 3143234 | 12620062 ~ 12651815 (+) |
| G111197 | NA | other | downstream | 3534356 | 13011184 ~ 13043448 (+) |
| AMCG00006672 | NA | other | downstream | 4456838 | 13933666 ~ 13939475 (+) |
