AMCG00006568


Basic Information

Item Value
gene id AMCG00006568
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 9592392 ~ 9595123 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006568
CACAGCCTGGCGAGAGGAAGTGTGTGCGAGAGTTCAAGCGAAGGCTGGacaccaacaaaataaataaaatataagaatacAGTCAACTTTATATGAAATTGAGTGCATGAGATCCAGTTTGAGTTATGCCCCGTTATTGTGCTGCAAAACTCTGTAAAAACCGAGGAGGCTTGCCTTCGAAAGACAATAAGAAAATTAGTTTCTACCCGTTCCCATTGCAAGACCACCAGCGTCTGCAGCAATGGGTCATTAACATGAGAAGGGAGGAGTGGACGCCGAGCAGACACCAGTACTTGTGCAGCGATCACTTCACGGAAGACTCCTTTGACATGCGCTGGGGGATCCGCTATTTGAAGCACACTGCGGTGCCTACAATTTTCCCCTTCACATATGACCGACATGAAGCACAATCCATGCAGAAGACTTCTGATATCAAAGACACTGATACATCTATCCGACCTGCTTCACCCCTGAAGAAGAAAGCACTCATTTTGAAAAGGGACCATCTCAGAGAACACCTGGACAGCCCTCTTCCCGAATGTGCGCAGGAAAAGGACGTAAAAGCTGTGAAAACCGAGTCGGATGGAAACGTGTGCCAGATCAAGACTATGTTTCTCATAGAGGCTGTGGAAGGAGTATCGTCCTGTGAGGTTTTTGATCTCAATGCTTCAGTGGCAGAAACCACAGACAATTCCCAGCCTGCAGATGAGCAGCAAGGAGGAGAGAGGACACTGGTAACGCCTGCGTCTCCTTCTGGGAGTGTGTCCAGTGAAAAGCAACACTGTCCCGACACAGAGTCGCCTTTGACAGTGACATGTACTGAAACCTCGGCTCAGTGCAGTGCAGCCGAAACCTCGCTTGAGCGGCTGGACGTTGCCATTACAGAGACGATTAACACGCTCCCTCTAGGCCTGCAGAGTAACGTCTTAGTAGAGACTGGAGAATCTGCGGAGATTGAAATAGAACCATGTAGCGCCGACCACATTTTACTGTATGAGCATTCATACTCTAAACAGGACATGGACAACGATCACCTGTGGAATAAGATCGCCAGTCTGCACAACAAAATAACCCAGCTggaaaagaaagaggagaaaacCGTTGCGAAAATTAACGTTCTTGAAGGTGTAATGATGCATCTGAAGAAGGAGAACATTGTCTGTGAAGAGAAGCGCAGAGCTCTGGAGAACTACTTCACGTCTCTTGAGTTTGCTATGGTGGAATGA

Function

GO: NA

KEGG:

id description
K23206 THAP5_8; THAP domain-containing protein 5/8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006568 True 1226 mRNA 0.47 3 9592392 9595123

Neighbor

gene id symbol gene type direction distance location
AMCG00006564 NA coding upstream 32332 9530233 ~ 9560060 (+)
AMCG00006563 bpgm coding upstream 108251 9479503 ~ 9484141 (+)
AMCG00006566 NA coding upstream 115564 9474800 ~ 9476828 (+)
AMCG00006560 NA coding upstream 533029 9036471 ~ 9059363 (+)
AMCG00006561 dock4,LOC106609220 coding upstream 583152 8912280 ~ 9009240 (+)
AMCG00006569 NA coding downstream 37660 9632783 ~ 9642065 (+)
AMCG00006567 NA coding downstream 58184 9653307 ~ 9656616 (+)
AMCG00006575 NA coding downstream 126416 9721539 ~ 9751895 (+)
AMCG00006574 NA coding downstream 210906 9806029 ~ 9839864 (+)
AMCG00006576 NA coding downstream 255527 9850650 ~ 9852328 (+)
G110590 NA non-coding upstream 135481 9456665 ~ 9456911 (+)
G110558 NA non-coding upstream 703900 8887686 ~ 8888492 (+)
G110523 NA non-coding upstream 797061 8795060 ~ 8795331 (+)
G110447 NA non-coding upstream 1412704 8179441 ~ 8179688 (+)
G110446 NA non-coding upstream 1413664 8178521 ~ 8178728 (+)
G110681 NA non-coding downstream 435303 10030426 ~ 10031846 (+)
G110722 NA non-coding downstream 774592 10369715 ~ 10369931 (+)
G110849 NA non-coding downstream 1525267 11120390 ~ 11120735 (+)
G110883 NA non-coding downstream 1754761 11349884 ~ 11350117 (+)
G110916 NA non-coding downstream 2076446 11671569 ~ 11672448 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 24116 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 868326 8710750 ~ 8724066 (+)
G110445 NA other upstream 1415606 8175760 ~ 8176786 (+)
G110279 NA other upstream 1937198 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 2680138 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 2550622 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 3024939 12620062 ~ 12651815 (+)
G111197 NA other downstream 3416061 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 4338543 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 11342374 20937497 ~ 20944977 (+)

Expression


Co-expression Network