AMCG00006569


Basic Information

Item Value
gene id AMCG00006569
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 9632783 ~ 9642065 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006569
ATGACTGTGAGCTTGGTTCTAGATGCCTATGTATTCCTCCTGAGCAGGACAGGTAACCTGTGGCTGAGCCAAGGTCAAAGGTCTTCCCAGTCCCCTGCTGTCCATTTCAGGATACCAAGAACACATCCAGCTACCAGACTCCATGTCAGAAGGTCACTCAGTTACAAAGCTGGGTATTTATACTTGAAGCAAAACTATTGCACAAAAACCAGGGGGCTGAAGGTATGGTCCAATAGAGGTGATTACCTTCGGCACAAGCTCAGTCTGTACGCCAACATTTCCCCATTCAGTACCTCATTATTGCGTAGATCAACAAGCTTGAGTCATCGCATGTCGCGAATCAAGAGCACATTGGACTCCGTCTCGAAAGCCGTCAGCGGAACCCACACTGAGCTCCTGTCGAAAATAGCCCGGCTCAAGCCCAATGCCGTGCAGGTGAGAAAAGAAGTCGAGTCCAACGTGCAAACTCAGTGTGAAGCTTCAGGAAGAGAGACGTCCGCTGCTGCAACTGTCCAACCGGCTGAGCTCGAAGAGAAGAAGAAACCTGAGGAGAAGAACCTGGACAACAACAGAAAATCCCCATCTGTGTTGACTAAACCTGCTCCGAACACATCCAGAAACACTGCAGTTACTAAACAGACTGTCACAGAACTTTTCCATCCGAGCAACTTCGCCACTAATTTCGGTGAAACATATAATTTTGTATCTAACCACATTAATGATTATTTCacaggagaaacaaaaatgattaacaAAGACAGCAACTCCAAAGCCTCATTGAAACCCCTTCCCGGTGCAGCGGACCAGACTCCTGTCCTTGTCGCACAAGCAGACAGTGAAAGGTCTGACCCACCTGCTGCTTCCCCCAATTCCCCAAAAAAGGGAATTGCCCATTACCTGTCCTACCCAGGCAATAGCGTTCAAGCATTCGTTGGCTACCTGGTCCCTTTGGTGCCCAAATTTCGCCACGAATCCAAAGCGATTGCAGAAGAGAAAGCCAAAGCTCCGGCCATGATAGAAGCAAGCACAAAGAAAGGAGACGGTGAGAATGGTACAGATCAGAAGACTGTGGAGGAGAAAGCCAAGCGACTTCTGCTTCAGAGGGAAAAGATTATTGCGAGAGTTAGTGTGGACAACAGAACAAGAGCATTGGTCCAAGCCCTGCAGAGAGCGTCCGATGTCAAGATCTACATCCACAGGGTGGAGGAGTTGAGCTACCACCTGCTGGAGTTCCCAGAGACCAGAGGAGTAGCAGTGAAGGAGAATATTATCCCGTGCTTGCTGCGTCTCAGACAGGCCAGTGATGAGACCCTGCAGGCGGCCGTGAGGGAGGTGCTGGCCCTGGTGGGCTACACTGACCCTGTCAAAGGCAGGGGCATCAGAGTCCTTTCCATCGATGGGGGAGGAACCAGGGGACTTGTTGCTCTTCAGACCCTTTATAAATTGGAAGCGCTGACTGGGAAACCGATTTACCAGTTGTTTGATTACATCTGTGGTGTCAGTACAGGGGCCATATTAGCCTTCATGCTGGGCGTCTTCCAGATCCCGTTGGATGAGTGCGAGGAGCTCTACAAAAGGCTTGGCACCGATGTCTTCAAGCAGAACGTCATCTTGGGAACCGTGAAGATGGGGTGGAGCCATGCTTTCTATGATAGTGAGATGTGGGAAACAATACTCAAagagagaatgggaTCAGACCTGATGATCGAGACCTCAAGAAACGCTAAATGCCCAAAGGTGTCAGCAGTGAGCACAATTGTGAACAGGGGGACACCTTTGAAGGCCTATGTCTTCAGGAACTACAACATGCTCCCCGGGATGAAGTCTCACTACTTGGGAGGTTGTCAGCACAAGCTGTGGCAGGCCATCCGCGCCTCATCTGCGGCACCAGGATACTTCCAGGAGTTCGTACTAGGAAATGACCTCCATCAG

Function

GO: NA

KEGG:

id description
K16815 PNPLA8; calcium-independent phospholipase A2-gamma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006569 True 1932 mRNA 0.50 7 9632783 9642065

Neighbor

gene id symbol gene type direction distance location
AMCG00006568 NA coding upstream 37660 9592392 ~ 9595123 (+)
AMCG00006564 NA coding upstream 72723 9530233 ~ 9560060 (+)
AMCG00006563 bpgm coding upstream 148642 9479503 ~ 9484141 (+)
AMCG00006566 NA coding upstream 155955 9474800 ~ 9476828 (+)
AMCG00006560 NA coding upstream 573420 9036471 ~ 9059363 (+)
AMCG00006567 NA coding downstream 11242 9653307 ~ 9656616 (+)
AMCG00006575 NA coding downstream 79474 9721539 ~ 9751895 (+)
AMCG00006574 NA coding downstream 163964 9806029 ~ 9839864 (+)
AMCG00006576 NA coding downstream 208585 9850650 ~ 9852328 (+)
AMCG00006577 NA coding downstream 326107 9968172 ~ 9984227 (+)
G110590 NA non-coding upstream 175872 9456665 ~ 9456911 (+)
G110558 NA non-coding upstream 744291 8887686 ~ 8888492 (+)
G110523 NA non-coding upstream 837452 8795060 ~ 8795331 (+)
G110447 NA non-coding upstream 1453095 8179441 ~ 8179688 (+)
G110446 NA non-coding upstream 1454055 8178521 ~ 8178728 (+)
G110681 NA non-coding downstream 388361 10030426 ~ 10031846 (+)
G110722 NA non-coding downstream 727650 10369715 ~ 10369931 (+)
G110849 NA non-coding downstream 1478325 11120390 ~ 11120735 (+)
G110883 NA non-coding downstream 1707819 11349884 ~ 11350117 (+)
G110916 NA non-coding downstream 2029504 11671569 ~ 11672448 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 64507 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 908717 8710750 ~ 8724066 (+)
G110445 NA other upstream 1455997 8175760 ~ 8176786 (+)
G110279 NA other upstream 1977589 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 2720529 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 2503680 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 2977997 12620062 ~ 12651815 (+)
G111197 NA other downstream 3369119 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 4291601 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 11295432 20937497 ~ 20944977 (+)

Expression


Co-expression Network