AMCG00006570


Basic Information

Item Value
gene id AMCG00006570
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 9588931 ~ 9592122 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006570
CCTCCACCAGGTATACTGCGCGGGGGATGTGCGTCTTGTCACGTTTTGTGGTTGTTACTGCCTCCTTGCGCAGTGCGAGTCTGCTGATGTTTTGTTCCTGCCGGGCAGCAGCCAAGTTaggctgataaaaaaaaagcactgtaTTGAAATTGTTACAGATATTAAAATCAACCAGACTGCACTTAAAGACGCAGAAAAGCTGAAGTCGTATTCATATTTTCTCTCGCATTCCGCCCGGGCTGTGTCCGATGCAGTCCGAGCTTCATCTCTCCAGGGTAATTAGCAACATGGCAACTGCCCAATCAGCGTTAACATTTGCCGTCTGGATTTTAATGATTTCTGAACTAATCCTGGCCAAAAAGGACTACTATGACATCCTCGGGGTGCCAAAAGACGCCTCTGAGCGCCAGATTAAGAAGGCCTTTCACAAACTTGCCATGAAGTACCACCCAGACAGGAATAAGAGCCCGAATGCTGAGGTGAAGTTCAGAGAAATTGCAGAAGCATACGAGACGCTCTCAGACGAGAAAAGAAGGCGACAGTATGATCAGATCAGATTTGGGTCTTTCCCCAACGACGGTACAGGTGGCAGACGCGGACCACAGTTTGAGCAGccctttaactttaactttGATGACATGGACTTTGACATCTTTGGGCAGAATCACCACAGTCATCATAAGAAGCACTTTGAGAACCACTTCCGGGCGCAGCAGGAAGCCCACAAGAGAGCCTTCCAGGACATGCCCTTCAACAGGGGGCTGTTCGACGACATGTTTGAAGACATGGAGAAGATGTTTACGTTCAGCGGGTTTGACGGCACGCGCAGGCACACGGTGAGGACTGAGAGCAGGTTCCAGGGCTCGGCCAAGCAGCAGTGCAGGACTGTCACGCAGCGCAGGGGCAACATGGTCACCACTTACACAGACTGCTCCGGCTCCTGAGACCGGAATGGAGGCGCAATACGAACGATTTGATCTCCAGCCTGGTTGTTCGATTGTTAACAttcatcttgtttttttgttttttaatgaataagcttaatttaacaatttacagCTGTGACATGACTGAAGTCCTTCATCTTTGGGTGGGTAGATTTGATATAGATAGTGTTAAACCGgacaataattattttcacaataaaacgCATAGAAGATGCTGaaagattagatttttttttttatatgcagcaaatgcaataaaaatgatTCTGCTTACAAGCAATAAATGTCAGATATAGTTCCCTCACTTACCTTTTGGAATTCCAGTCAAGGCTAATGCATATACCTCCAAGACTTGAGGGTCCAACACATATGATTGTGTAGCCTTTTTGAAATGAACATGTAGTTTAACTGCTGGTGTTCAAACATAACATGACCCGTGtaaatttgattgattttatccAAAAAGCTGCAATCCAATTTATGTTGTGCTACATCACAATTAACCTATTGTGCAAACATTGAGTATTCTATTGTCTAAAACTGTCTACTAATTACAATTTCAagctgttttgaaatgtaaaaatattttgtgatgATTGATTGCCCTAGACATCTTGCTGTCTTTGTGTTGACTTAGCAGGATAATATAGAGATTTGTATTTCCTGCCTTAGGGATTATTCAAAGGTTAATTAGGCAGGGATACAATTAACATGCATCTGAAAGATTAGACTGTGGACTTCTCATTTTGCTGAAATGTGTGGCTCTTCCATACCAGTTCATACTCAGGAATGCTTGCATTATATAGTGTAAGAGTTTTAGAATTTtggttcagttttatttatgtatagatATATGTTTTCCTGTTAACTCTTAAATAGCAGCTGATTATTGACTTGGTCCCTTTTTCAAGATTAGTGTCTCATCATGTTAGATATTGCAggaaataatatttgaaaattgTTACTTTTCAACATCTTTGGGAAAGGGAGAGTATTTGCACTCCGAATGGCATATTGTAATATTGCTGTTGTTAACCCTGACTTACAAAGCTATTCGAATGAAGAGAGACCATCTGTAATCACCTGGTGTTTAACATACATTAACATATAGACTCTGTTACCTCATACCCTTTTTGTAGACCTATCTTTGATCTACAGTATCTAATGTGCAATATGTCTAGCCAGCTTTTCGTCTCTGTACttatttttgtctgcttttgCTTGTGTTACTGCTGGCTTTATAGTAACGTGGAATTGATGTACAGCTGAAATGTCTTgcactttcattattttaatcctATGGAtgaaatttacatttaacagaCCTTGACAGTTGTAGAT

Function

GO: NA

KEGG:

id description
K09515 DNAJB9; DnaJ homolog subfamily B member 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006570 True 2288 mRNA 0.41 3 9588931 9592122

Neighbor

gene id symbol gene type direction distance location
AMCG00006571 dnm1l,LOC107716704,LOC106561645 coding downstream 1425 9571489 ~ 9587506 (-)
AMCG00006562 LOC105007066,LOC106576072,LOC106609221 coding downstream 391464 9195436 ~ 9197467 (-)
AMCG00006559 LOC102797044,LOC102787037 coding downstream 676928 8887691 ~ 8912003 (-)
AMCG00006554 NA coding downstream 719409 8858345 ~ 8869522 (-)
AMCG00006553 NA coding downstream 732257 8851743 ~ 8856674 (-)
AMCG00006573 NA coding upstream 13416 9605538 ~ 9606425 (-)
AMCG00006572 NA coding upstream 31963 9624085 ~ 9625892 (-)
AMCG00006580 NA coding upstream 476900 10069022 ~ 10084834 (-)
AMCG00006578 zcrb1 coding upstream 518339 10110461 ~ 10115803 (-)
AMCG00006582 NA coding upstream 590055 10182177 ~ 10198686 (-)
G110594 NA non-coding downstream 111425 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 574605 9010140 ~ 9014326 (-)
G110369 psmc2 non-coding downstream 1679703 7907558 ~ 7909228 (-)
G110309 NA non-coding downstream 1832079 7756625 ~ 7756852 (-)
G110271 NA non-coding downstream 2020772 7567888 ~ 7568159 (-)
G110720 NA non-coding upstream 712809 10304931 ~ 10305247 (-)
G110733 LOC103376870 non-coding upstream 829439 10421561 ~ 10470060 (-)
G110757 LOC103376870 non-coding upstream 1010973 10603095 ~ 10603733 (-)
G110917 NA non-coding upstream 2079447 11671569 ~ 11672483 (-)
G110939 NA non-coding upstream 2196818 11788940 ~ 11789234 (-)
G110605 NA other downstream 28827 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 589667 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 794869 8783905 ~ 8794062 (-)
G110507 NA other downstream 864579 8722388 ~ 8724352 (-)
G110195 NA other downstream 2481793 7078389 ~ 7107138 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other upstream 495153 10087275 ~ 10107285 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 2425747 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 2457372 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 2479268 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 2545060 12137182 ~ 12140405 (-)

Expression


Co-expression Network