AMCG00006572


Basic Information

Item Value
gene id AMCG00006572
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 9624085 ~ 9625892 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006572
ATGCAAAACTTGTCATCGTCCAAAGATTTCCACAACCAGGAGACTATAAACGAAAACCTTTTCCAGCTGGGATTTCCCGCAGCAAACAACAGCTCTGGGGCGCCTGGCAGAGCCGACAGGGATCAACAGTTAGCTTGGGTAGAGATCGCAGTCCTGGGACTAATTTTCGTAGTCGCCTCCATGGGCAATTCTATCCTGGTAACCGTCCTGTGGAGGAAGCGAAAGAGGATGTCTAGGATGTATGTGTTTATGATGCATCTCAGCATTGCGGATTTGGTGGTGGCGGACTTCCAGGTGCTGCCCCAGTTCATCTGGGACATCACTGATGTTTTTTGGGGACCAGATGTTCTCTGCAGGGGTGTGAAGTTCCTGCAGCTCGTTGGGATGTTTGCTTCCACTTACATGACTGTTGCTATGACCGTGGACCGGTTCCAAGCCGTGTGCTACCCGATGGTGACGTTCCAAAAGAAGAGGGCATTCTGGAACGCGGCCATAGGTTCGAGCTGGTGCGTGGCTTTCATGTTCAGCCTGCCCCAGGTATTCATCTTCTCCAAAACTGAAATCGCCCCCGGAGTTTATGAATGCTGGGCTGAATTCATCCAACCATGGGGTCCAAAGGCTTACATTACCTGGGTCTTTACGGTTATATTCTTTATCCCCACGATTATACTCCTCACTTGTCAGCTTCAGATCTGCCGGATACTGAAGATGAACATTAACCACAAAACCCAAGGCGAAGTTTTCAGGCACAACCATGTGCAAGTGATGCCTTCAAGAGCGAGCAACTGCATCTGCTTCTCTAAAGCAATGATCAAGACGGTGAAAATGACCATAGTGACGGTGATAGCTTATGTCCTCTGTTGGGCGCCTTTCTTCGTCGTGCAGTTGTGGTCTGTCTGGTTTCCAAGTGCAATCACTGAAGGCTCTGTGTTCACAATCATCATGCTACTGGGGAATCTGAACAGCTGTGCAAACCCTTGgatttacatgtatttctgtGGTCACATACCATGTTgcaaaaaacacagagacagcagCTCCATACGGGAGGACTCTGCAATTACTGCCAGCATCAACTTCGGAGACAAATACCCAATAGAGAATTCCACATCATTATAG

Function

GO: NA

KEGG:

id description
K08376 NPSR1, GPR154; neuropeptide S receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006572 True 1119 mRNA 0.49 2 9624085 9625892

Neighbor

gene id symbol gene type direction distance location
AMCG00006573 NA coding downstream 17660 9605538 ~ 9606425 (-)
AMCG00006570 NA coding downstream 31963 9588931 ~ 9592122 (-)
AMCG00006571 dnm1l,LOC107716704,LOC106561645 coding downstream 36579 9571489 ~ 9587506 (-)
AMCG00006562 LOC105007066,LOC106576072,LOC106609221 coding downstream 426618 9195436 ~ 9197467 (-)
AMCG00006559 LOC102797044,LOC102787037 coding downstream 712082 8887691 ~ 8912003 (-)
AMCG00006580 NA coding upstream 443130 10069022 ~ 10084834 (-)
AMCG00006578 zcrb1 coding upstream 484569 10110461 ~ 10115803 (-)
AMCG00006582 NA coding upstream 556285 10182177 ~ 10198686 (-)
AMCG00006584 NA coding upstream 750042 10375934 ~ 10385675 (-)
AMCG00006583 adamts20 coding upstream 777682 10403574 ~ 10422520 (-)
G110594 NA non-coding downstream 146579 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 609759 9010140 ~ 9014326 (-)
G110369 psmc2 non-coding downstream 1714857 7907558 ~ 7909228 (-)
G110309 NA non-coding downstream 1867233 7756625 ~ 7756852 (-)
G110271 NA non-coding downstream 2055926 7567888 ~ 7568159 (-)
G110720 NA non-coding upstream 679039 10304931 ~ 10305247 (-)
G110733 LOC103376870 non-coding upstream 795669 10421561 ~ 10470060 (-)
G110757 LOC103376870 non-coding upstream 977203 10603095 ~ 10603733 (-)
G110917 NA non-coding upstream 2045677 11671569 ~ 11672483 (-)
G110939 NA non-coding upstream 2163048 11788940 ~ 11789234 (-)
G110605 NA other downstream 63981 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 624821 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 830023 8783905 ~ 8794062 (-)
G110507 NA other downstream 899733 8722388 ~ 8724352 (-)
G110195 NA other downstream 2516947 7078389 ~ 7107138 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other upstream 461383 10087275 ~ 10107285 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 2391977 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 2423602 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 2445498 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 2511290 12137182 ~ 12140405 (-)

Expression


Co-expression Network