AMCG00006573


Basic Information

Item Value
gene id AMCG00006573
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 9605538 ~ 9606425 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006573
ATGACTGCGGGGCTGAACTGCAGAAGGAGCACTGAGCATGCAAAGAGAAAGGACAAGCTCGCATGTGAAGACGGAAATGGACAGCTTGCATTCATTAAAGTTATCATCCTGGCAGTTATTTATGTCCTGGCTTCCTTTGGAAACATGTTCTTGCTGTGTGCCCTTTGGAGACGACGCAAAATAAATTCATGGACACGTGTTCCTTCTGCACTTGAGTCTTGCCAACCTGGTGGTGAAATTTTTTCAAGTCCAGCCACAACTCCTGTGGGAGATCACTTATCGTTTCAATGGCTCAGCTGTTGTTTGCAGAGGTGTCAACTGTGGTCTGTGTGGGCCCCAGGTAATGCGCTGACACAA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006573 True 357 mRNA 0.48 2 9605538 9606425

Neighbor

gene id symbol gene type direction distance location
AMCG00006570 NA coding downstream 13416 9588931 ~ 9592122 (-)
AMCG00006571 dnm1l,LOC107716704,LOC106561645 coding downstream 18032 9571489 ~ 9587506 (-)
AMCG00006562 LOC105007066,LOC106576072,LOC106609221 coding downstream 408071 9195436 ~ 9197467 (-)
AMCG00006559 LOC102797044,LOC102787037 coding downstream 693535 8887691 ~ 8912003 (-)
AMCG00006554 NA coding downstream 736016 8858345 ~ 8869522 (-)
AMCG00006572 NA coding upstream 17660 9624085 ~ 9625892 (-)
AMCG00006580 NA coding upstream 462597 10069022 ~ 10084834 (-)
AMCG00006578 zcrb1 coding upstream 504036 10110461 ~ 10115803 (-)
AMCG00006582 NA coding upstream 575752 10182177 ~ 10198686 (-)
AMCG00006584 NA coding upstream 769509 10375934 ~ 10385675 (-)
G110594 NA non-coding downstream 128032 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 591212 9010140 ~ 9014326 (-)
G110369 psmc2 non-coding downstream 1696310 7907558 ~ 7909228 (-)
G110309 NA non-coding downstream 1848686 7756625 ~ 7756852 (-)
G110271 NA non-coding downstream 2037379 7567888 ~ 7568159 (-)
G110720 NA non-coding upstream 698506 10304931 ~ 10305247 (-)
G110733 LOC103376870 non-coding upstream 815136 10421561 ~ 10470060 (-)
G110757 LOC103376870 non-coding upstream 996670 10603095 ~ 10603733 (-)
G110917 NA non-coding upstream 2065144 11671569 ~ 11672483 (-)
G110939 NA non-coding upstream 2182515 11788940 ~ 11789234 (-)
G110605 NA other downstream 45434 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 606274 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 811476 8783905 ~ 8794062 (-)
G110507 NA other downstream 881186 8722388 ~ 8724352 (-)
G110195 NA other downstream 2498400 7078389 ~ 7107138 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other upstream 480850 10087275 ~ 10107285 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 2411444 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 2443069 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 2464965 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 2530757 12137182 ~ 12140405 (-)

Expression


Co-expression Network