AMCG00006576


Basic Information

Item Value
gene id AMCG00006576
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 9850650 ~ 9852328 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006576
ATGGGCTTTGACTTGGACCGTTTCGTGGGCTCCGTGGACCCGGACCTGAAGTGCAGCCTGTGCTGTAAGGTGCTGGAGGAGCCCATGTCCACGCCGTGCGGACACGTCTTCTGTGCCGCTTGCCTGCTGCCCTGGGCTGTCCAACACAGGCTGTGCCCGCTGCAGTGCCGCCCCATCTCCACCAGGGACCTCCACCAGGTGCTGCCCCTGAAGAGCCTCATCCAGAAGCTGCAGATACGCTGCGACCACCGGGCCGAGGGCTGCCCCCAGACCGTCCCGGTGCAGGAGCTGGCGGCTCACTCACAGGGGTGCGACTACAGCCCGGCTCGGTGCGGCAATGAGGGCTGCCCTGAAGTGGTGCGACTGAAGGACATGGACGCCCACATGCGGGACAGCTGTGCGCACAGGCCGGTGGGGAAGTGTCCGCAGGGCTGCGGGCTGCTTCTGCTGCACAAGGACGTGGTGCAGGACAGCCACTGCTGCCTGGAGGCCCTGCGAGCGCACAGCGGCGCCCTGGAGCAGGAGGCCAGGACCCAGCGGCTCCGGTGGGGCAACCGAGAGAGGGCGCTGCTGGCCCAGGTGGCAGCCCTGCAGAGCGAGGTCCAGCTCACTGCCCTGAGGTACCAGAAGAGGTTTCACCAGTACATGATGCACATCAACACCATCACCAAACACATGACTGGGCAGTGCAAGGGAGGAGAGCATCAGCAGCTGAGTATagccctgcagagagagagtgacactCTAGGATTCAATATCATCGGAGGGACGCTCAGTCAGGAGGACGCAACACCTGAAGGGATTTATGTGTCTAAAATTGTAGAGAAGGGTCCTGCTGACGGGGCGGGTGGACTGCGACTGCACGACCGAATCATAGAGGTAGGGCACGACTGCACCCCCGCATTCACACAACTCTGCTCTTTGTATACAGAGGACCCACGTGTGTTTGAACTCCATTACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006576 True 963 mRNA 0.62 3 9850650 9852328

Neighbor

gene id symbol gene type direction distance location
AMCG00006574 NA coding upstream 10786 9806029 ~ 9839864 (+)
AMCG00006575 NA coding upstream 98755 9721539 ~ 9751895 (+)
AMCG00006567 NA coding upstream 194034 9653307 ~ 9656616 (+)
AMCG00006569 NA coding upstream 208585 9632783 ~ 9642065 (+)
AMCG00006568 NA coding upstream 255527 9592392 ~ 9595123 (+)
AMCG00006577 NA coding downstream 115844 9968172 ~ 9984227 (+)
AMCG00006581 NA coding downstream 307665 10159993 ~ 10179843 (+)
AMCG00006590 NA coding downstream 659844 10512172 ~ 10518858 (+)
AMCG00006589 NA coding downstream 740969 10593297 ~ 10617772 (+)
AMCG00006596 NA coding downstream 908840 10761168 ~ 10763850 (+)
G110590 NA non-coding upstream 393739 9456665 ~ 9456911 (+)
G110558 NA non-coding upstream 962158 8887686 ~ 8888492 (+)
G110523 NA non-coding upstream 1055319 8795060 ~ 8795331 (+)
G110447 NA non-coding upstream 1670962 8179441 ~ 8179688 (+)
G110446 NA non-coding upstream 1671922 8178521 ~ 8178728 (+)
G110681 NA non-coding downstream 178098 10030426 ~ 10031846 (+)
G110722 NA non-coding downstream 517387 10369715 ~ 10369931 (+)
G110849 NA non-coding downstream 1268062 11120390 ~ 11120735 (+)
G110883 NA non-coding downstream 1497556 11349884 ~ 11350117 (+)
G110916 NA non-coding downstream 1819241 11671569 ~ 11672448 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 282374 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 1126584 8710750 ~ 8724066 (+)
G110445 NA other upstream 1673864 8175760 ~ 8176786 (+)
G110279 NA other upstream 2195456 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 2938396 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 2293417 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 2767734 12620062 ~ 12651815 (+)
G111197 NA other downstream 3158856 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 4081338 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 11085169 20937497 ~ 20944977 (+)

Expression


Co-expression Network