AMCG00006584


Basic Information

Item Value
gene id AMCG00006584
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10375934 ~ 10385675 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006584
TGTTCAGTGAGCTGTGGAAAAGGAACCAAACACCGTGATGTTTTCTGCGTTGACCAAGACCAAACCCAAGTAGAAGAACAACACTGCGATCTTCTGCCCAAACCTCGGATTCACAAGTCCTGTCGGTCAAGGAGATGCCCCAGctggaaagcaaacaaatggaAGGAGTGCTCACTGTCATGTGGGGTTGGGATTCAGCAAAGGGAGGTCTACTGCAGGATGAAGGGTACGGGCAGAGTGGCCGAAGGGCTGTGTAACCCACTCAGCCGGCCCACCAGCACACAGCAGTGCAGCTCCTCTGACTGTCTCCATTACCAGTGGGTAGCAGATGAATGGCAAGATTGCAATGCGAGCTGCGGTGAAGGAACGAGGAACCGAAAACTCTCTTGTGTGGATCAAGCAATGAACCCGGTTAATGAGAGACACTGCAACTCTTCATCCAAACCAGCAGCTTCCCAGACATGCAAGACTGTCCCTTGTGAATACATCTGGATCACAGGAGACTGGTCACAGTGTTCAACAAGCTGTGGACCTGGATTTCAACAGCGGATGATTTCCTGCTCAGAGGTGCACTCGTCCCAGGACCTCTACTCATACACCCCCCAGTCTTTGCCCCATGCCGAGTGTCCACAGCCCTATCCCCCCGAGAGGCAGGACTGTAATATAAGCGAGTGTCCTCCTGTAGCTGCCTGGAAAGTCAGACCCTGGAGTAAGTGCTCTCTGACTTGTGGAGCCGGGGTGATGGAGAGAAGAGTGGAGTGCCTGACCTCAAAGGATCAACCGTCAAAAAGTTGTCGCCAAATTGAGAAGCCAGAATCCCATGCTGCCTGtcaagagagagagtGTGAACTGTTCACAAGCTGCAGAGAGGTGCAGATTAAAGAAGAATTCAGAAAAGATGGGGAATATTTTCTccgtattaaaaacaaaattctccAGATCTACTGTGCTGATATGCAAACCAGTTATCCAAAAGAATATGTGTCCTTACGTAGCGGTCAGACGGACAACTTTTCAGAAGTATATGGATACAGAAACGACTATCCGGCGGCTGGATACACACTTTTTCACAAGGTCCGACTGGACGTCAGCGCCATGCAGATAATAACAACAGACCTCCTCTTTACTCAAACTCTCCTGGGGAGGGCAGTGCCTTTCGCCACAGCAGGGGACTGCTACAGTGCTGCTAAATGCCCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006584 True 1200 mRNA 0.51 9 10375934 10385675

Neighbor

gene id symbol gene type direction distance location
AMCG00006582 NA coding downstream 177248 10182177 ~ 10198686 (-)
AMCG00006578 zcrb1 coding downstream 260131 10110461 ~ 10115803 (-)
AMCG00006580 NA coding downstream 291100 10069022 ~ 10084834 (-)
AMCG00006572 NA coding downstream 750042 9624085 ~ 9625892 (-)
AMCG00006573 NA coding downstream 769509 9605538 ~ 9606425 (-)
AMCG00006583 adamts20 coding upstream 17899 10403574 ~ 10422520 (-)
AMCG00006585 NA coding upstream 58550 10444225 ~ 10467706 (-)
AMCG00006586 NA coding upstream 120376 10506051 ~ 10511361 (-)
AMCG00006587 NA coding upstream 135637 10521312 ~ 10527300 (-)
AMCG00006588 NA coding upstream 165753 10551428 ~ 10551733 (-)
G110720 NA non-coding downstream 70687 10304931 ~ 10305247 (-)
G110594 NA non-coding downstream 898428 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 1361608 9010140 ~ 9014326 (-)
G110369 psmc2 non-coding downstream 2466706 7907558 ~ 7909228 (-)
G110309 NA non-coding downstream 2619082 7756625 ~ 7756852 (-)
G110733 LOC103376870 non-coding upstream 35886 10421561 ~ 10470060 (-)
G110757 LOC103376870 non-coding upstream 217420 10603095 ~ 10603733 (-)
G110917 NA non-coding upstream 1285894 11671569 ~ 11672483 (-)
G110939 NA non-coding upstream 1403265 11788940 ~ 11789234 (-)
G110940 NA non-coding upstream 1404377 11790052 ~ 11793501 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 268649 10087275 ~ 10107285 (-)
G110605 NA other downstream 815830 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 1376670 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 1581872 8783905 ~ 8794062 (-)
G110507 NA other downstream 1651582 8722388 ~ 8724352 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 1632194 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 1663819 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 1685715 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 1751507 12137182 ~ 12140405 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 2490617 12876292 ~ 12878656 (-)

Expression


Co-expression Network