AMCG00006589


Basic Information

Item Value
gene id AMCG00006589
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10593297 ~ 10617772 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006589
TCCACACATGGTGACAGAGTACATGGGCATCAGGAACGAAAGTTTCATGAAAATAGCAGCAGTAGGAACCTGGATGGGAGACTTTGTGACTGCCTGGATGgtgactgatatGATGCTTCAAGATAAACACTACCCAGACTGGGGAAAAGCTGCCAGGAGATTTTGGAAACAGGGAAATAACAGAATTGTTCTCTTCTGGAGTGTCCTGATTTCTCTGACATCTGTAGTGGTTGTGGTCATCAGCACTGACTGGATCAGCTGGGACAACTTGAATCGGGGATTTCTGCCCAGTGATGAAGTCTCCAGAGCCTTCCTGGCATCTTTCATCCTGGTGTTTGACCTCCTAATTGTGATGCAGCTACCTGTATGCACCAGTATTTTCAAAGAAGAGTATCACATACACATCACAGGAAAATGGTTTAACTATGGGATAATTTTCCTGGTATTGATTTTGGATTTGAACATGTGGAAGAATCAGATCTTTTACAAGCCCTACGAATACGGGCAGTACGTCGGCCCGGGCGAGAAGATCTACACGGTGGAGGACCCCGACACCTTGAGCCAATTCAATAAGAGCACTCTGTCTTGGGAATGGAGATCCAACAACACCAATCCTAGATATAACGTGACCTACAGCAGCAGAGACATGTTCTTGCACAGCAGGTACGTGGGAGCCAGCCTGGATGTGAAGTGTCTCGCTTTCATCCCCAGCCTGGCCGCGTTCGCTCTCTTTGGATTCTTCATCTGGCTCCTCGGGCGATTCCAGGACAGCGAGCAGGGCcccaaaaacaaagacaagacCTACGAGAGGATAAAGCGGAAATCCCCATCCGAATACAGCAAGGATATGGGCGTGACTCCAGAGGAGGCCAACGTTACACTGAACGAAGCCTTAAAAAGCAATAATCCCATGCTTCTCTCAGTAGACACTCCTAATATGGGCTGCAGTAGTTCTACCTCCCATTCGTCACCAGAAACTCAAGAGAGTCACCCTAACATTGTGATTGACAGTGTGGACCCGGTGGAACCAGAAGTCTCCATTGATGTTTGCAAACCATCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006589 True 1063 mRNA 0.48 5 10593297 10617772

Neighbor

gene id symbol gene type direction distance location
AMCG00006590 NA coding upstream 74439 10512172 ~ 10518858 (+)
AMCG00006581 NA coding upstream 413454 10159993 ~ 10179843 (+)
AMCG00006577 NA coding upstream 609070 9968172 ~ 9984227 (+)
AMCG00006576 NA coding upstream 740969 9850650 ~ 9852328 (+)
AMCG00006574 NA coding upstream 753433 9806029 ~ 9839864 (+)
AMCG00006596 NA coding downstream 143396 10761168 ~ 10763850 (+)
AMCG00006595 NA coding downstream 168488 10786260 ~ 10818604 (+)
AMCG00006593 arid2,LOC106576411 coding downstream 210543 10828315 ~ 10829509 (+)
AMCG00006594 NA coding downstream 238273 10856045 ~ 10873557 (+)
AMCG00006601 atp23,LOC106609469,LOC106576246 coding downstream 498788 11116560 ~ 11119469 (+)
G110722 NA non-coding upstream 223366 10369715 ~ 10369931 (+)
G110681 NA non-coding upstream 561451 10030426 ~ 10031846 (+)
G110590 NA non-coding upstream 1136386 9456665 ~ 9456911 (+)
G110558 NA non-coding upstream 1704805 8887686 ~ 8888492 (+)
G110523 NA non-coding upstream 1797966 8795060 ~ 8795331 (+)
G110849 NA non-coding downstream 502618 11120390 ~ 11120735 (+)
G110883 NA non-coding downstream 732112 11349884 ~ 11350117 (+)
G110916 NA non-coding downstream 1053797 11671569 ~ 11672448 (+)
G110930 NA non-coding downstream 1175396 11793168 ~ 11793535 (+)
G111008 crebl2,crbl2 non-coding downstream 1405038 12022810 ~ 12024549 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 1025021 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 1869231 8710750 ~ 8724066 (+)
G110445 NA other upstream 2416511 8175760 ~ 8176786 (+)
G110279 NA other upstream 2938103 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 3681043 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 1527973 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 2002290 12620062 ~ 12651815 (+)
G111197 NA other downstream 2393412 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 3315894 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 10319725 20937497 ~ 20944977 (+)

Expression


Co-expression Network