AMCG00006590


Basic Information

Item Value
gene id AMCG00006590
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10512172 ~ 10518858 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006590
GATGAGTAATCCAATAACACCTTCTACGTCTGTCCGGAGTTTAAATCTTGGCCTTGTGCGCCAGCTGTCTGATTTTCTGGACCCCCAGGACGGCTGGAAGAAGGTTGCGGTGGATATCCAGAAACCCACAGGACAGCCCAGATACACGCAGCTTCACCTGAGGAGATTTGAACGAGTGTCAGCCACAGGGAAGAGCCCAACTGCCGAATTAATTTTTGATTGGGGAACAACAAACTGCACAGTTGGAGACCTGGACGCACCTCAGCTGCCTGACAGCACAACACCTCCAGACGGGCAAGAGGACTTCGGTGAGACAGGTTTCCacaggttttcttttaatgagCTGATGAAGCTCACCAGTAACTTTGATGAGCGCCCAGTGTCTGAGGGAGGGAATAAGCTGGGCGAGGGAGGCTTTGGCGTGGTCTACCGGGCCTACTTCAATAAGAAAGTGGTGGCAGTGAAGAAACTAACTACGGCAAGTATTCCTGATTTCTCTCTCCAGGAGTTAAAGCTTCAGTTTATTCAAGAAATACAAACTTTGAAGACgttGCAACATGAGAACCTTGTAGAAATGGTCGGTTTTGCTGATGACGGGGAACATCCCTGTCTGGTGTATCTGTACATGTTTAATGGCTCTTTATTGGACCGCCTGGCCTGTCTGGATGGATCCCCACCTCTACCCTGGAGCACGAGATGTTCGATTGCGGAGGGGACGGCAAGCGGCCTTGAATATCTGCACGCCAACCATCACATCCACAGGGACATCAAAAGTGGAAATATCTTACTGGATAAAATGTTTGTGCCCAAGATCTCGGATTTCGGGCTCACACGTGCCTCGGCGAAGCAGATGTCGACAGTCATGACTGAAAGGATCGTGGGCACCACGGCGTACATGTCACCCGAGGCGTTACGAGGGGAGATCACTATGAAGTCTGATGTCTTCAGCTTTGGAGTTGTTTTGCTGGAATTAATATCTGGACTCCCTCCAGCTGATGACAGCCGTGATCCACAGTTTCTGatgAATATGAAAGATGAGATTGAAGATCAGGAGATAACACTGGAGGATTTTGTGGACAAGAAGATGAAAGACTGGGCCCTGACATCAGCCGAGCAAATGTTCTCCATTGGGAGCCGGTGTCTCAGTGATAGGAAGAACAAAAGGCCGGAGATGAAA

Function

GO:

id name namespace
GO:0009987 cellular process biological_process
GO:0005488 binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K04733 IRAK4; interleukin-1 receptor-associated kinase 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006590 True 1177 mRNA 0.49 10 10512172 10518858

Neighbor

gene id symbol gene type direction distance location
AMCG00006581 NA coding upstream 332329 10159993 ~ 10179843 (+)
AMCG00006577 NA coding upstream 527945 9968172 ~ 9984227 (+)
AMCG00006576 NA coding upstream 659844 9850650 ~ 9852328 (+)
AMCG00006574 NA coding upstream 672308 9806029 ~ 9839864 (+)
AMCG00006575 NA coding upstream 760277 9721539 ~ 9751895 (+)
AMCG00006589 NA coding downstream 74439 10593297 ~ 10617772 (+)
AMCG00006596 NA coding downstream 242310 10761168 ~ 10763850 (+)
AMCG00006595 NA coding downstream 267402 10786260 ~ 10818604 (+)
AMCG00006593 arid2,LOC106576411 coding downstream 309457 10828315 ~ 10829509 (+)
AMCG00006594 NA coding downstream 337187 10856045 ~ 10873557 (+)
G110722 NA non-coding upstream 142241 10369715 ~ 10369931 (+)
G110681 NA non-coding upstream 480326 10030426 ~ 10031846 (+)
G110590 NA non-coding upstream 1055261 9456665 ~ 9456911 (+)
G110558 NA non-coding upstream 1623680 8887686 ~ 8888492 (+)
G110523 NA non-coding upstream 1716841 8795060 ~ 8795331 (+)
G110849 NA non-coding downstream 601532 11120390 ~ 11120735 (+)
G110883 NA non-coding downstream 831026 11349884 ~ 11350117 (+)
G110916 NA non-coding downstream 1152711 11671569 ~ 11672448 (+)
G110930 NA non-coding downstream 1274310 11793168 ~ 11793535 (+)
G111008 crebl2,crbl2 non-coding downstream 1503952 12022810 ~ 12024549 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 943896 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 1788106 8710750 ~ 8724066 (+)
G110445 NA other upstream 2335386 8175760 ~ 8176786 (+)
G110279 NA other upstream 2856978 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 3599918 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 1626887 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 2101204 12620062 ~ 12651815 (+)
G111197 NA other downstream 2492326 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 3414808 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 10418639 20937497 ~ 20944977 (+)

Expression


Co-expression Network