AMCG00006595


Basic Information

Item Value
gene id AMCG00006595
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10786260 ~ 10818604 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006595
TGCAGGCTCCGAGCAGTGCCGCTGCGGCTGCCATGGACCTGCAGGATAACAGCCACACCGCTTGATCGGCTGCTGTGCTGCGAGTCGGTCTGCCAGCTGCCGCTCACGATGAGTGAACACGAGATCTTGGAGATGGACTCGGACCCGGGCGACACGGAGCTGGTGGACGAGGAGCAGTtatacaGCCAAGATTTTCTAACAACCTATGCAGCAGTACGGGAGGGAGAAGGCATGTTCAAGACAGAAATGACGGAGTTCAACAATGAGACGGACTCTCTGTTCTTTGTTGATGGAAAAAGGAGGATTGATTTTGTGTTGGTCTATGAGGATGAGGAAAAGAAGGAATATGAGAAACGACAGGTACATCAGAGACGAAAAGTAGTGGatgaaaagattatttttgtgaagGTCCACGCACCCTGGGACGTCCTTTGCACATACGCAGAGGTGCTACATATCAAACTACCCATTGAGGCAAATGATCTGGCATCCAAAGAGTCCCCCTTCAACTGCTTTACCAAATGCTTCTACCCCAGCGAAGAACTGATCAAACCTGAGGCTGAGTATTTCACTGCCCCCTTCGAGAAGGACAGGATAGAATACTTCCACGTGACAGATCGCGATACGTTCTTCACTCCTTCCATGAGGAGCCGAATGGTATACTATATTCTCAGCCGTGCCCCTTATGAGGTGAGaggcaaaataacaaaatttgGCATCACCAAACTGCTGGACGGTGGTGTGTACAAGGCTGCCTACCCACTACATGATTGCAGATTCAATGTTAAGTCTGAAGACAAAAACTGCCCCAATGAACGCTACCTCTTGTATAAAGAATGGGCTCACCCTCTGAGCTTCTATAAGATGCAGCCTTTGGATCTAATAAGGAAGTATTATGGAGAAAAGATCAGCATCTATTTTGCTTGGCTCGGCTTCTACACAAAAATGCTGGCCTTCGCAGCAGTGGTGGGTCTCGGCTGCTTTATTTATGGATACCAAACCCAGGAGACGAGTACGTGGAGTCAAGAGGTGTGTGATCCTAACATCGGTGGCAGTATTATCATGTGTCCACAGTGTGACCAGGAATGCGCCTACTGGAGGCTAAACAGCACCTGCGAGTCCTCAAAGaaACTCTGCATATTTGACAGTTTTGGGACACTAGTTTTTGCCATATTCATGGCAATTTGGGTCACGCTATTCCTGGAGTTCTGGAAGCGGTACCAGGCCCAGCTGGAGTACGAATGGGACACGGTGGAGTTCCTGGAGCAGGAGGAACAGCCTCGCCCAGAGTACGAAGCCAAATGCGTTCATGATCGAGTCAATCCCATCACAAAGattttgctGATTATTGCTTCCGTTGTTGGGATTATAGTCTACCGCCTGGCTGTGTTCTTCGCTTTCTCTGCAAAACTGAGAAAAGCCACAAAGGAACTGGAGCCCTTCAGAGAGTACGTTACTCCCCAGAACGCCACTACAGTAACAGCCTCGCTCATCAGCTTTGTCATCATCATGGTCCTCAACATTGTCTACGAGAAGGTAGCAATCTGGATCACTGACTTTGAACTGCCCCGGACACAGACTGAATACGAGAACAGCTTAACCATGAAGATGTTTCTTTTCCAGTTTGTCAACTACTATTCTTCCTGCTTctacattgctttttttaaggGTAAGATCGTGGGTTACCCTGGCGATCCGGTCTACTGGCTTGGTAGATACAGAAATGAGGAGCCATCTGGAACAACATACAAGAAGTGCTGCTTCCTGATCCAGTTTGGTTTCGTCACCTTGTTTGTGGCCTCCTTCCCTCTGGCACCCCTCTTGGCCCTCCTCAATAACGTGTTTGAGATCCGAGTGGACGCCTGGAAGATCACCACACAGTTTCGCCGGGTGGTGCCAGAGAAGGCACAAGACATTGGAGCATGGCAGCCCATCCTTCAGGGCATTGCCATTCTGGCTGTGGTAACAAATGCCATGATCATTGCTTTTACATCCGACATGATCCCGAGATTAGTTTACTACTGGTCCTTCTCTGTGTATCCCTACGGAGAGCACCCAGACCACACCATGATGGGCTACATCAACAATTCCCTCTCTGTCTTCAGAATCAGTGACTTCTCCAATGAAAGCCTGCCCCTCCAGTATCGGGATTTTAGATATCCACCTGGACACCcaaaacaatatgaatacaGTATTTACTATTGGCATGTCATCGCTGCCAAACTGGCTTTCATTATAGTTATGGAGcaCATTGTCTACTTCACGAAGTTCATCCTGTCGTATATCATTCCGGACGTACCTATAGAAGTAAAAGAGCAGATCAAACGGGAGAAATACTTAACCCAGAAGCTGCTTCACGAGGCCAGCCTGAAACTGGTGACCAGACGCATGAAACCCATTACTGACAAACTACTCAAACGCTCAGATGGAGACTTTAAGTTAATCACCGAAAGCAGTGAATAGCAAAGGAGAAGAGCCCTCGGCTTTCGGActctgaaaaagagaaacacagtcGTCTGCCttaattactattttatatttgtccacagatcaaatatttgttttatattttatttttgtattgtatagatgttgatatgcattgttttatttcaagtcCAACCCAGTCATTTGTCAGACACgtccaatatgtttttttaaagggggaACATACAACATTGTTTGCAAAGTAACTTCTCGATTGGATTACACAATAAACTCCTATCAGAGGATTCCTATGAAAGGTATCTTCCCTCTTAAGAATGACACACGAACCTGTCATCTTGCCCCTTTTGAAAACGATGCCATGCTGTGCATCCTGTTACGTTTCTGTGAAGTCGCACTTTTGTTTCATAAAAGCTGACGGGCAAAAATAAGTACAGCTTTTTAGGAAGTTACTACAAGAGGGGGTGGTGAGAGCCAGTCAGAGCCACATGCCACAATTCACATGACTCTTTAACTATTACAATGAATGTTGCGACAATCACTTAAACTAATGTCTATCGATTTAACATATCCCGTTACTTTATTATTTGGTGTTTTGGCTACAAACTTCTAGAAGATTTTTACAACAAAGTATTCCTAACACCTTGCACGAAAATAATAGAATGAAAACTTAATTGCTAGGAATCATGATGCAGGCTTcttgttgaattgtttttatagaaataaTTTCTTAAAACGTAACTAAGAAGCTgtgaacatatatttttaatctatttggaaaaatgtcagaaaatgtatttagaaaaataaaccatgtcATCCGTTATTTCAGCAGTGTGGTATTATTCAGTTTTTGTCCCCTTTATAAAAATCGTTGATAATACTCGGGTCTAATATAAGACATAATCCGTTTATgctaaatgtgtttgtgtaatgtTGTGGGCTACAACAATGTATTGTGATACATTGCTCTAAGGCACTTTgagttttacattacatttgtataaagCCTTTCAAGCTCCAcatctattttttgtttcccaAAATGATGACCATAATAATATCATAGTTTTCTTGAATAATCAAAATTCAATTTGCcgcctttttttttatttttttaaatttattttgtgtttgaagtgTGGATTTTGCAGAAGATTTTGTGAATGCTAAACCAAACTATGTATGCAAAATTATCCGCATACTATCAATTATGAGACGGCAGGCACGAATTCAAAAATTCCACCTTCATTATTCAAAAATCAGTGTCCTTCTATGCATTGAAGTGGTTTGAAGAGACAAAACCACCAATATTCTGATGGCAATGACGTAATGCTGAAATGATCATATAATACTTACAGAAATCTGTTTTGCGGTTTTTGAGATTGAGATGACATTTTTCTTGATGTAGACAGTAGTTGCACAGTAAATATACATTAGAACAGGCcagttgaaattaaaatatttatatcacAATTGGGAGTTTGAAGAGTGCCAACCAGTGTTATCCTGGTCTCCAGGTTGGGATCTTTTGGATGTTTTTTATAGTTAATTGAATAGAGCTAAGTCCACCATGTAGGGAATGTACTAATGGTGGGGAGCATTGTAACTGCATCATTAGTTTACACGACTGCTGCAATGTAATTGTACTGAAAGGACTcctggtttatttattgttcattcTTATATTTCTAAAGAACTGCCAGCCATTAATGCTGTGTGTAACAGGTGTCATCTGTTTAGTGTAGAACTGTTTTTGGTCCAGTATATGAATGCTAAAAGGTTCTGgcaaatcacaaattaacaGAGAACGAAGTTACATGTTTGCCAGCTGATTTAAAGTCAAAATTATATGCAGAATgcatcaaataaaacaagaagTATAACGCTTTTCCACATTGTGTACACCTAACTGCTAACTGCCAGCTGCTCTGGTTTCCATGTTTGATTGGGTGACTTTTTCTTTAGATGCCTATATTCACATTGCTTGTGGTTTCAGAATGAAATAACTGTTGTAAGTCTGTTTTTGTCTCATATTCCATTCTCTCTCACCCGATCCTTTAATGACCAGTTACTTCACTGTTTTGGTTTAGAAGTAATCAGTTTTAGCTTATTGGAGTGAGGAATTTTGCCAATGAAATCCATATCCCCTAAACTGAATGTGAACAGATTTTggaaagtgtgtgtatatatatcatatatattattctacATATAAAGCAgcatatatatgcaaattagATATTAATTCCTAAGTGCCTTTTACATAATGTCATTAAAGTGCTGCATTTCACATGTATTTTACCTAAAATGGCCCTTGCCACTTGTACGATCTGTGTGCCATATTGGTTTATTAAATGATGCCTGTGTATATCCTGTCTGTCTACTTCCTGTAACCACTGTTGATTATGCTGTACTTGGCGTACACAGTATGCATGTCTGTTACACAACCAATAACCCTCATTATTAAACCTGTGGTTATTCATTA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K19500 ANO6, TMEM16F; anoctamin-6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006595 True 4933 mRNA 0.41 17 10786260 10818604

Neighbor

gene id symbol gene type direction distance location
AMCG00006596 NA coding upstream 22410 10761168 ~ 10763850 (+)
AMCG00006589 NA coding upstream 168488 10593297 ~ 10617772 (+)
AMCG00006590 NA coding upstream 267402 10512172 ~ 10518858 (+)
AMCG00006581 NA coding upstream 606417 10159993 ~ 10179843 (+)
AMCG00006577 NA coding upstream 802033 9968172 ~ 9984227 (+)
AMCG00006593 arid2,LOC106576411 coding downstream 9711 10828315 ~ 10829509 (+)
AMCG00006594 NA coding downstream 37441 10856045 ~ 10873557 (+)
AMCG00006601 atp23,LOC106609469,LOC106576246 coding downstream 297956 11116560 ~ 11119469 (+)
AMCG00006606 NA coding downstream 487287 11305891 ~ 11321973 (+)
AMCG00006610 NA coding downstream 840283 11658887 ~ 11706824 (+)
G110722 NA non-coding upstream 416329 10369715 ~ 10369931 (+)
G110681 NA non-coding upstream 754414 10030426 ~ 10031846 (+)
G110590 NA non-coding upstream 1329349 9456665 ~ 9456911 (+)
G110558 NA non-coding upstream 1897768 8887686 ~ 8888492 (+)
G110523 NA non-coding upstream 1990929 8795060 ~ 8795331 (+)
G110849 NA non-coding downstream 301786 11120390 ~ 11120735 (+)
G110883 NA non-coding downstream 531280 11349884 ~ 11350117 (+)
G110916 NA non-coding downstream 852965 11671569 ~ 11672448 (+)
G110930 NA non-coding downstream 974564 11793168 ~ 11793535 (+)
G111008 crebl2,crbl2 non-coding downstream 1204206 12022810 ~ 12024549 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 1217984 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 2062194 8710750 ~ 8724066 (+)
G110445 NA other upstream 2609474 8175760 ~ 8176786 (+)
G110279 NA other upstream 3131066 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 3874006 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 1327141 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 1801458 12620062 ~ 12651815 (+)
G111197 NA other downstream 2192580 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 3115062 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 10118893 20937497 ~ 20944977 (+)

Expression


Co-expression Network