AMCG00006599


Basic Information

Item Value
gene id AMCG00006599
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10907697 ~ 10917640 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006599
atgcAGAGCAAGTGCACGATTTCCAAGTTGAAGTATCAACTGTTACTTTTTCCAGTACAAataaattcatataaaatgaGAAATGGAGTGGTTTACTCGGCAGAGTTGCAGAGCTTTGATAATGCAGACGAAGATGATCTGGAGGACAGCCAGAAAAGTGCACTTGAAATggacttagaggaggaggaggaggaagtgtTTGAGAGTCAAGCAACCCTTACAAAATTGCACTCGAAGCACACGAAGGCCTGGTATGTTGATGGAAATAATCTTATTGTTATTGTCACTATTGCTGTCATCCTACCACTGTGCCTTCTGAAGACCTTAGGGTATCTTGGATACACTAGTGGATTCTCCTTAGGATGTATGGTGTTCTTTCTATTTGTGgtTATCTTCAAGAAATTTACATTGCCTTGCCCTGGCATTGAGCTGAATGTCACTCTTGTGACCCATAACGAAACATGTGAAGAGTCATACATATCATTTAACAGCAAGGTGCGTTCCTCTGCTCTGGAGCTGATGAAGCAGAAACAGTTTAAGTGGAGCTTGCACATTGGGGTCACGTTTATTCTTTTGGCGTTATGTGTGCTTCTGGTCATCTTTATACCTTCAATCAAAGACATATTTGCTGTTATAGGTGCAACATCGGCCAATATGCTGATCTTCATTCTGCCGGCAGCAATATATCTGAAACTTAATGATTCCCTGCCTTTTAAAAAGAGGATAATGCCCATTCTTTTCTTGACAGCCGGAGTCATCAGCGCTCTTATCACCGTGCCGTTGGTGATCATCGACTGGGTTCACACAGTGCAGAACAACGAAACCACTGCGCACTGAAACTGATCCGCACGGCCAGATGACAAGAAAACATTCCTAAAGacttgacaaatatatattgtaatgcagGCTATACATCAACAACCTCAACTTAACTCACCATTTCTCAAATACGGTTCTAAAGTACACTgaactaaaattaaatgaataatataataattttatttaactgatCGGTGAGTATGGTAGTTTGAAAACACAGGAGGACGAACATACATACGATCGAGATACAACCTTAGTTTTCCTGCTGTTGTAGGCATGTCTTGTAAAATATGTTAACTTCCTAATGGAATGAAGAATAGTGCTTTTGATGGGTTTCATGCTTTCCCTCAATAGCCAGTTACCACAGATCTGAGGTCAGACAAGGCTACGGCATAGTAGAATCTACAGTTGCTATGGTCAGCTTTGACCAATTTAGATGCCTTGACATCTTGAACGTATGTATGTTCCTCGTTATAAGTTCTTTActagaattattttaatgagaagGCAAACCTTCCCAATTGCTTGAACTTTCTAGAAATCGCATAATtcctgtgttttgatttgttgtatGCGATTTTATTCTGTCCATGTAATTAAACGTGCACAATCTCAGTGAATGGTTTTagcaaaacaatacatgcagaaatgtatatatgtacagtatgatATCACGTGATACATTTTAAGTTCTTAAGGTGCAGGCAAATCCATGTCTTTCCAATGCCAAATGGTTTTCACCTGTAGccttttttaaaattcagttcTAGTAATCCATTGAAACTTTTAGGATTACAGATAATTTTTAGTTGTGGTAGCTATAGAAACTCAGGAATTTATCACTGCCGCCCTGCAAAGACACAGACTGCTGGTTTCTGAGCTGCAATTCCAAAATATCTCCTTACACTCAGAAATGTACCCAATCATATCATTACTTTGTTTTACAGCTTCCGCATTATGTGCCATTACTTCATGCATCTGCCAATTTATtaagaaatattgtttttggtattggggttatttattggtttgtattttccacattttctttattgttgctgttttaaaaatagtgtaCTAATTGTATTCTATATAGGTgggtgtttgtgtatttatcagAAAgtcatgaatgtattttttaaagtaatatgttttatgatgtAATATTTGTAGTGTATTTGAGGAGATCTTCTTAAACAAGTGGGTAAAGTACACCGTTTTACCTGTATGGTCAttcagtatgtatatatttttaataaataaaaaattgccTATGACTGAactaatattttgttaaatattgagTAAATGAAGAATCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006599 True 2139 mRNA 0.37 8 10907697 10917640

Neighbor

gene id symbol gene type direction distance location
AMCG00006598 NA coding downstream 15575 10877715 ~ 10892122 (-)
AMCG00006597 NA coding downstream 91535 10762179 ~ 10816162 (-)
AMCG00006592 NA coding downstream 176067 10704073 ~ 10731630 (-)
AMCG00006591 nell2,LOC105908795,LOC108428412 coding downstream 254292 10639658 ~ 10653405 (-)
AMCG00006588 NA coding downstream 355964 10551428 ~ 10551733 (-)
AMCG00006600 NA coding upstream 17757 10935397 ~ 10944809 (-)
AMCG00006603 NA coding upstream 76998 10994638 ~ 11015369 (-)
AMCG00006605 NA coding upstream 134412 11052052 ~ 11052897 (-)
AMCG00006604 NA coding upstream 184445 11102085 ~ 11117866 (-)
AMCG00006602 NA coding upstream 296207 11213847 ~ 11231189 (-)
G110757 LOC103376870 non-coding downstream 303964 10603095 ~ 10603733 (-)
G110733 LOC103376870 non-coding downstream 437637 10421561 ~ 10470060 (-)
G110720 NA non-coding downstream 602450 10304931 ~ 10305247 (-)
G110594 NA non-coding downstream 1430191 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 1893371 9010140 ~ 9014326 (-)
G110917 NA non-coding upstream 753929 11671569 ~ 11672483 (-)
G110939 NA non-coding upstream 871300 11788940 ~ 11789234 (-)
G110940 NA non-coding upstream 872412 11790052 ~ 11793501 (-)
G110942 NA non-coding upstream 876896 11794536 ~ 11796342 (-)
G110957 NA non-coding upstream 982323 11899963 ~ 11902168 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 800412 10087275 ~ 10107285 (-)
G110605 NA other downstream 1347593 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 1908433 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 2113635 8783905 ~ 8794062 (-)
G110507 NA other downstream 2183345 8722388 ~ 8724352 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 1100229 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 1131854 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 1153750 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 1219542 12137182 ~ 12140405 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 1958652 12876292 ~ 12878656 (-)

Expression


Co-expression Network