AMCG00006603


Basic Information

Item Value
gene id AMCG00006603
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10994638 ~ 11015369 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006603
AATATAAGCAGTGCATGGGATGAACCCTTTGCACTTGTGAACAGTGAATAAATTGAAGACCGGCATCTGCTCAATTATTTGGATGTGCTGTACTGGATAAAGGACAGAACACGATCACTTTTCTCATGTGTCCCTTCACCTGCCTGGGCTAAATGAAGTCACATTCCTTCCTTGTGAACCAAGAGGTGCCAGTAGTTCCAAGTTCACATTTGAAAGTAATTACAAGAGCGCTGGGATCCTAGTCAGTGAAGACTCCTTCCTTCACGAGAACATTGTGTCCAGAGATTGAAACTAAgacctgaaaaacaacaacgcaGGGGAACAGCAGTTGTCTGTAGTTCCAGACACACCGTATCCATCccacgttgttgttgttgacatgGACCGAATGGAACTCAAGAGAGTCAGCACCGAGCCCGACGACGACAGCGGGGACAGCCTTGATGACCGCTACAATGAACCCATTGATTCAGAGAAGGTGACGATAAGCAGTCAATTTTGTGATGAAGACGATACAGAGAGTCAGAAGTTCCTTACTAACGGCAtgctgaagaagaagaagttcGAAGAATATCATGAGGAATATGTAAGGATACCTGAGATCCTTCTGTTAGCAGTAGCCATATTATCATTGTACTCTGTTCATCTTTTATTGCTGACGTCAAAGGAAGGGGGCTCTTTAATATATGAGAAACTCGGCGAAAAGGCATTTGGGTGGCCAGGAAAAATGGCTGCATTTATATCTATAACAATGCAGAATATAGGAGCTATGTCGAGTTACCTCTTCATTGTGAAATATGAACTCCCTGAAGTCATTCGGGCATTTATGGGACTCGAGGAAAATTCTGGGTTACCTTGGTTATACCAGCGGCCTGTCGTTGACCTGTATGGTGTTCTTTCTGGCAGTTATAATGTCGAGGCCGAGTTACTTCACACATTCACCAAAGTGTACAAGTTTGACACCCTGCTTCTAATGGTGCGCTTGGCGGTCCTGACAGCTGTCACTCTCACCGTCCCTATTGTGCTCTTTCCAGTAAGATCATCTGCTGCCACCATGCTTATCTTCATTCTTCCAGCTGCGTTCTACCTTAGACTAGTGAAATCCATTCCTTACCGGTCACCACAGAAAATCGGGGCGACCGTGTTCCTCATCGTTGGGGTTATATTCATGATTGGAAGTATGTCACTCATTGTTATGGACTGGATTCACAACCCACCTGGCTCTGGTGGCCACTAGTGGTGCTCGGGCCGAGGCGTACACACTGAAGACTGGAAGCTCGGGTGTCATTCTCCTGAGAGAACACACCTACTTGAAAGTGCGTGTTCCTGTGAGGAGATGCCATTCCACGCCGACGTTAAAAGCAAGAATCCAAAGACTGAGTATTAGAGTATTACAAGggttgtttaaaaaacaatacctgTACATTTGAATAAGGGAGTGtttctatttatgtttttaagattATGGACTCGTTCATATGAGTTTGCTGTGTAATGTTTTGCTAGTTACTTTGTTGATCAATAATGATCATTGCAAGAGCAGTGATGGTGCAGGTGCTGAATACGGACGCCAAGAAACTCATTCAAAGATATCAAGTGTATCTGACTGTCATTTACTGGAGAAGATTGGAGAAAGTTTGTTGCGCATGTGCCTTTCTCTGCCATCGCCGTGTGTGTACAGCCTTTTTGTGGCCTGGATATTTGCAGGTCATAGCCAACAGTGGCCTGATGAATCTTTGTATTACAACTGAGTAGCTGAGTTACAGGTGCTTATATTGAGCTGTTTTGGATGTCTGTGGCAGTGGCCATCATGTGTTCAAAGGCCATAATGTTCACACACTCGCCATGAGGGGAATTTTCAGCATGGAAGAAATAGCACTTTTAGCTCCCTaatgtgtctatatataaatgtatttatatttatgtatacacacacatacactcttcCCCCACATtagttgtatgtgtgtttttttctgtttagtaCAGATGAGTGGAATTCATTAATTTCACCAAAGTCAGTGAACAAGTATTGACTGAGTATTTAATTCATTCtaaagaaggaaacaaacaaattgtcAATGACCTCCCACATCTATGTTTCAGTACAGGACActgtgagtttgtgtttttaatacttctgtttaaagttttcttttgtgttttattattcattcatgtttatATAATTCCCTAAGGGTTGCTAAGGTCTTGTTTTAAGTAGGCAGACAGTAGTGTCCATGCTTTTGTAAGCTGTTATTCTGTACAATATTGGAATGTGAATGCCAAGAAGTGTCTATAGTCAGGATCAGTAACCTCTCGAGAAATTGAACAGGGGTTGCAGTGTAAAGTGCCAACAATACATATAACACCATTTGTAAGATACAAAATTTATGTAGAATACAATGTACTGTTAAAACGTAACTATTCATGGATGTGTTCACTTTAACAATGTAAACTATTCATCAAAGCTAACATTAACTTTCTGTATGTATGctcaatttacagtttaaaagatacaagaaaacatatattttgttttgtaacatttaagGTATCAGTGCCTAAACTAAGAATCATTTCCTGTCCAATCCAACCAGTTTCCAGACTTAGGGCTTAGACTTTAACCCACCTGCTattagcaaactacaaacctgtacatcatagcggttacatttctgattagaagaaagtggcatcttactaaaaatgaagccgcaactgagtatagttctgtagttttcttttagcgggtgggtcaaattgTAGATTTTATCTGGCCCTTAAACTCTTATGTTTTCTTTAAGACATATTATTGTAAATTTGATACCATACATAGAAAGCATTttagtataattaaataaagagcaatcaaataaaacagcaaaagtaataataataattaatcccCTAATTGAaggtaattttatttaataaaattatcaCTCACAAAAATTGTGACCTAGCAATTCAAATAACTGTTTCTTCTTGCATATTCTGTATTTAACTGTTCTAATATAATCCAGTTTTACTTGTAAATATTTTCTATGTTAAAATGTACCTTAATTTTACCTCATTTTGTATCATGTTTGCGCATAAACAGACTCTGATAATCCCATCTTTATggacagagaaaataattcaaaggcttcaaaaatgttaatacaaaagggaaaacataatttaaaaattagaaaCTGGTACCATAAATATATCAACTAAATTTCTTTAATGATTGTACCATAATATTGATGGTCTACCATTATTGCCTTGTGTAAATCAATGTCAACATACTTGTAGTTTACCTTTAAAATGGAAATCCACCTCTAGTTTAGAGCATGTTCAAACTAAACTGAACACAAGTTTATGTGAAATCTTGGAAGCCAATATTTATAGATCTTTTGTAGATCTCCATCTACGGGAAACAAGTggatatttcaaatgaaatagcttaatattttgtgcatgttttaGATTACATACATGGTCTTTTTTGACGATtgtatatgtactgtaaataaTCTGTTGTATGgtacacattttgtatgaatTTGTGGAGGTTATAAGGGATTGTGCCACAAACCAACAGTTTGTTGTTCATCggaattgtttctttttttttttttgttcctttttaaagcTCTTAGttactttaatttcatattagcagcaaaaacattaaaaatacaaatttcagcTGTTACACACAGTATGAGGTACTTGTACTGAATATTTCATTTGTCAATTGGACTAATGTTGGTAGTCTTGTTTAACAGCAGTTTTTTAGTTCTTGTTATGCATCCAGATTGCCTACTAAGTCTACTATGGACACATCAGATGTTTATATACTAGTAACCTATGACCAGGCATAAACTacacaaaatacttttcagaTACTACATAGCCtgtgtggaaaaatatattgacATCCTGCCCATGTAGAACTTTTGCAAATCGTATCACAGCATGGAAGACAAAGATCATTCATGTTCTTTGTGTTTCCATGTAAACCTCGCATCATCAGAAAAACATTAATAGAATTATAATTTTAACTGAAGATCAAAATAACTACAATTCCCACAATACTGTGAATAGaatgtttctgttttactgCTTTTTTGGGACAGTAAACGGAAACTATTTTCTCAAAGGTAATAGGTTTTCCCTACAACAATGGGAAAAACACAGaggcaatataaatatttatgtgaCATTGTGTATTTGGTTTATCTGTTTCAAAACCAACATATGCCTTAAGCCTCCAGTTTTAGGTCGGTACCATGCAGTGAACAGTAAAAGGGCAGGGTCTCGACCGGGGCGAATTGTTGACTGTGGGGCACTACAGGAGGGCACTTTGTGAGTGGCAGGGCAAAGGGGCAGGAGCCGTCGCCCACCCCATGCACACGCCTGATGCAGGTTCTGTATCGATGGCACTGTAGACAGTGAAGACTTGTAATGCTGTATTTCAATATCAACGTTGTGcctttttcaaacaaaaatgttgttttattctctACAGTTCATGActatgttaaaatgcaatattgctTTGTCTTAGTTTGTCGTTCTGtcagacaaaatacatttcttcaaaGGTTCAGAATGAACAAGCATGTTATAGTCTGATTGCTGCTGTTATAAAAGGTCAGAGTGAATGTTAAGTTCCAGTTTTATTCTCCTTCCCTGTGGTACAACTAAAACTAATTTGTATATATGCTGGAacaaagaaaactttttttgtataaGAGAAACAATTTCAATACTATGTTACatgcacaataaaaaataaaaaatgtgtttctgttttatattattaa

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006603 True 4817 mRNA 0.37 11 10994638 11015369

Neighbor

gene id symbol gene type direction distance location
AMCG00006600 NA coding downstream 49829 10935397 ~ 10944809 (-)
AMCG00006599 NA coding downstream 76998 10907697 ~ 10917640 (-)
AMCG00006598 NA coding downstream 102516 10877715 ~ 10892122 (-)
AMCG00006597 NA coding downstream 178476 10762179 ~ 10816162 (-)
AMCG00006592 NA coding downstream 263008 10704073 ~ 10731630 (-)
AMCG00006605 NA coding upstream 36683 11052052 ~ 11052897 (-)
AMCG00006604 NA coding upstream 86716 11102085 ~ 11117866 (-)
AMCG00006602 NA coding upstream 198478 11213847 ~ 11231189 (-)
AMCG00006607 fam19a2,LOC103364248,LOC108248567,LOC103023565 coding upstream 534945 11550314 ~ 11551561 (-)
AMCG00006612 NA coding upstream 597226 11612595 ~ 11619824 (-)
G110757 LOC103376870 non-coding downstream 390905 10603095 ~ 10603733 (-)
G110733 LOC103376870 non-coding downstream 524578 10421561 ~ 10470060 (-)
G110720 NA non-coding downstream 689391 10304931 ~ 10305247 (-)
G110594 NA non-coding downstream 1517132 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 1980312 9010140 ~ 9014326 (-)
G110917 NA non-coding upstream 656200 11671569 ~ 11672483 (-)
G110939 NA non-coding upstream 773571 11788940 ~ 11789234 (-)
G110940 NA non-coding upstream 774683 11790052 ~ 11793501 (-)
G110942 NA non-coding upstream 779167 11794536 ~ 11796342 (-)
G110957 NA non-coding upstream 884594 11899963 ~ 11902168 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 887353 10087275 ~ 10107285 (-)
G110605 NA other downstream 1434534 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 1995374 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 2200576 8783905 ~ 8794062 (-)
G110507 NA other downstream 2270286 8722388 ~ 8724352 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 1002500 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 1034125 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 1056021 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 1121813 12137182 ~ 12140405 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 1860923 12876292 ~ 12878656 (-)

Expression


Co-expression Network