AMCG00006610


Basic Information

Item Value
gene id AMCG00006610
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 11658887 ~ 11706824 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006610
atggctgcctCAGATCTAACCAGGATACTTTGCTCCAATAATGGGGCGATGGACTGCGGGGAATTACTGGCCAACATCGCCTCAGATGTAGATACAATGAAGAGTTtggaaaagatgctggaggaccGGGGAAAGTTTGCTGTTATTCGTGTGAAAGGGAAAAGGAGAGTCATTGCCAGGACTAAACTGAGACTGTGCCGAGCCAGAGGCTGCGAGGACTGCAGCCACTTACACCTCTGCAAGTTCTTCCTTTATGGGGAGTGTAAATTCAGCAGGGGCAGAAGAAACTGCCGGTTCAGCCATGACATGAACTCTGTGCACAATGCAAAGGTCCTGCGAGAGAATGACCTCCAGGACCTGGACAGGAGAGAGCTCTGCCAGCTGCTGCTCCAGAATGAACAGACCCTCCTGCCTCcgGTCTGTTTTTCATATAATAAAGGCAATGGACAATACGGTAATTGTGATGGCCAGGAAAGCTGCACGAGGCTTCACATCTGTGAGAAGTATATCCGAGGAACTTGTAATGCTGGGGTAAACTGTGACAAATCACATGACTTCTGCGACGGTCACCCACTGAAAACCCTGGAAGAGAGAGGGCTGCCCAGACATCTGATCAACTCCCTTTTACCAGTGTACCAGAATATCCTGGACATGAAGAATGAGAACTACAACAGGAAGGAGCCACAGAAAGaTAAAACAgagatctgtattttttatgtcaAGAAAAACTGCATGCATGGAGGATTCAACCCTGTTAATTTTGACATGATGACCAGGGGATCTGCTAAACCTACCTTTATCCTCACTACAGAATGGGCCTGGTACTGGGAGGACGAGAATGGAACCTGGATTCAATATGCAGCATCAGCTGGACTTCACTCTGCCTCATCCATCACAAGTGAAGATCTCGAGAAACTATATCTGGAAGACGACAAAGCAGTCATTGAGTTCACAGCAGGCCGACAGGCATATAAACTCAGCTTTCAAGATATGattcagacaaacaaacaatatggaACCAAAAGACTAGTTCGAAGACGTCCAGTGTTTGTTTCCACAGCTGATGCTCAGACCATCAGAACAAGCCAAAAAgaacagatggaaaaaaataacagggGGAAGGGTGTAAACGAGAAGCTCCTGTTCCATGGCACTGATGCTGAATATGTTGATGCTATTtgcaatcaaaactttgactggAGACTTTGTGGAAAGCATGCAACAGCCTATGGAAAAGGAAGTTACTTTGCAAGGGATGCAAAGTACTCGCACGGCTACACTGGGTCTTCAACAACCAAGTTCATGTTTGTTTCCCGGGTTTTGGTTGGCCAGTACATAACGGGGAACTCCAGTTACCTCCGACCCCCCTCGAAAGATGGTGGAGATTGCAATCAAAGTGAACTGTGTGCAGTGGAGAAAATGGCTGCTGACTGTATCACAAGCTGTGCTACGAAGATCCTCTGCTCACATGGGGGGGCACTGGAATACAGCTACCTCAGAGGCTACATTCAACAGTTGCAAATTCCAGATTCGGTGTTCTGTAAAATCCTGAGGAGCAGTGGGAACTTTGTCATAGTTTCATGTGGAGATAACGTGCCGGGCTACGGTCTCAGCCCAGACAGTAAAAATGACTCCTCCCTTCTGCCCAAGATATGCATGCACTACAATAAGGGAACTGGGGAATTTGGAAATTGCTCCTTCAAGGAAAGCTGCAAGAAGCTCCATTTATGTCTGCActttctaaatggctgttgcAAGTTCGGTCCTACATGCAAGAGATCCCACTCCATTGATAGAAAAACCTTCAGAATGTTGTCGGAGAAAGGCCTAGgaaaacaagaccCTGAGAAACAACCAGATCTAAATAAACAGTTGGACAGCACTGAAATCTGTCTCTTTAACATCCGCAATCAGTGCACTTTTAAAGACGCATGCATTAATATCCACTATTCCCTGCCCTACAAATGGGAGGTCTTCAATGGCTTATTCTGGGAAGAATTACCTCATATGGAGCATATTGAGAAGGCCTTCTGTAATCCAGACAACACAACAAGTGACGGGACTCCAGCTGTAGACTTTGTTAACATGACTCGGGGGTCAGCTAAGGTGAGGCGTCTGTCCACGGTGTCCTCTGTGACCAAACCCGCTCACTTCATCCTGACCACGGTGTGGGCCTGGTACTGGAGAGATGAGCGCAGAGTGTGGAAGGAATATGGAAAGCAATTGGATACAAATCAGACTTCATCAGTCACATCAGAAACCATTGAGAAAGCTTTCTTAGCAGATGGAAACAGTATCCTGACTTTCACCGCTGGGAAGCATGAGTACACTCTTACTTTCAAAGTGAATCCTCTGGGACTAAATCCTTTCCAAGTCATTGGGATCCAGCTGCTGTGCCTGAATGTGGATACGagGCAGAAGCAGCGAATGAAGCTGAGAAACGGAGGGATGGATGTGGAAGAGCGATTCTTGTTCCATGGTACTACCCAGAGTACCCTGCAAGCTATCTGTGAGCATAATTTCGActggagaatctgtggaaaaaaTGGCACTTTGTACGGCAAAGGAAGCTACTTTGCAAGAGACGCCAAGTACTCACACCACTACACCGGCTCCACCCCTGTCCGGGCTATGTTTGTTAGCAGGGTCCTTGTTGGCATGTTTGTGAGAGGAGAGACTGACTATCTGCTCCCGCCATACAAGCCTGGCAGTACCACCAGCATGTATGACAGTTGTGTTAATGACCCAGGCAACCCTTCGATTTTCGTGGTGTTTGAAAAGGACCAGGTGTACCCAGAATACCTTATATACTACACAGAGGTGACCACACAGCAACAAACGGTGCCAGCTCCTGTTGCTTCAtCTCTTCCGTGGCTGTCTATGCCTTGCGAAACAGCGGAAGACAATGCTGTCAgAACGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006610 True 2922 mRNA 0.47 22 11658887 11706824

Neighbor

gene id symbol gene type direction distance location
AMCG00006606 NA coding upstream 336914 11305891 ~ 11321973 (+)
AMCG00006601 atp23,LOC106609469,LOC106576246 coding upstream 539418 11116560 ~ 11119469 (+)
AMCG00006594 NA coding upstream 785330 10856045 ~ 10873557 (+)
AMCG00006593 arid2,LOC106576411 coding upstream 829378 10828315 ~ 10829509 (+)
AMCG00006595 NA coding upstream 840283 10786260 ~ 10818604 (+)
AMCG00006609 syn3,LOC106576044 coding downstream 27859 11734683 ~ 11735631 (+)
AMCG00006608 syn3 coding downstream 67162 11773986 ~ 11790179 (+)
AMCG00006614 ptpro coding downstream 177113 11883937 ~ 11902046 (+)
AMCG00006617 tbk1 coding downstream 280636 11987460 ~ 12000919 (+)
AMCG00006620 NA coding downstream 306262 12013086 ~ 12014321 (+)
G110883 NA non-coding upstream 308770 11349884 ~ 11350117 (+)
G110849 NA non-coding upstream 538152 11120390 ~ 11120735 (+)
G110722 NA non-coding upstream 1288956 10369715 ~ 10369931 (+)
G110681 NA non-coding upstream 1627041 10030426 ~ 10031846 (+)
G110590 NA non-coding upstream 2201976 9456665 ~ 9456911 (+)
G110930 NA non-coding downstream 86344 11793168 ~ 11793535 (+)
G111008 crebl2,crbl2 non-coding downstream 315986 12022810 ~ 12024549 (+)
G111063 NA non-coding downstream 643933 12350757 ~ 12353363 (+)
G111148 NA non-coding downstream 1052747 12759571 ~ 12770925 (+)
G111161 NA non-coding downstream 1139099 12845923 ~ 12847502 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 2090611 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 2934821 8710750 ~ 8724066 (+)
G110445 NA other upstream 3482101 8175760 ~ 8176786 (+)
G110279 NA other upstream 4003693 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 4746633 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 438921 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 913238 12620062 ~ 12651815 (+)
G111197 NA other downstream 1304360 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 2226842 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 9230673 20937497 ~ 20944977 (+)

Expression


Co-expression Network