AMCG00006616


Basic Information

Item Value
gene id AMCG00006616
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 12031655 ~ 12054027 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006616
agcaggTCATCTGAATCCTGCCTGATTGTGCTGGGGTTTCAGTCGCTGCGCCGCCCACCAGCCCGAGCCTTTTTAGACACCAGAGTCATAAACAGCAAACCATTTCCAGCTGAAGTGGTTAACTAAAAGCCGTATTTCAATCTGACACGTTTTTCACGTTGAAGTTTCCCCCCCGAACTCACACATGCGCAGTAACGTCGACCCTGCTTGTGTGTGCCTTTAAGAGGTTCGGTTCATTCGCAGTGGGATTGGTTTCAAGTGAcgtcattcttttatttttatcccaaTGACCTCATCCTTTGGTTGAAGTTTAGTGACCAGtgaatctttcttttttttttttttttttattttgctttttagttttcttttggttttgtttggttgcttGTCGTGAGGCAAAGTTGTGCAGCCAGGCTCGGATGTGACAAAAGAAGACACCATGTGGAAATGGACTTTCTCTCAGCCGTTTCTAGCAGAATAAGTACTTAAGCATGAATAACTGAAGAAATAAAGGTGGAGAATGATGTAATCCCTACACTGCCCGGGAAAAAGCATCTTTTGTGTCAATTGTGCAGTGGTGTGAAAGTTTCCCCTCCTGCAAACCATCTTCCAGTGAATTAGACGTAGTGGATGCAGCTTACTGTTTGGCACAGactctgtatttaaacacaaacacataaaaggGGAGAGTTTTTCTTTGAGTGAGCGAGGCTTTTCTTTACAAATGGGCTCAGCTTTTCTTCTGCCAAGCACCACCAGGATGACATCATATATCGCTGACACAATGAAACAGTTCATCTCTTGAGGACCCTTCTAGTTACGTCACTGGTGTGGACTTAGAAAGCAGccgagtgagtgagagtgagagcgagagagcgagagagaccgGGAAGAGGGGCGGGTGGGAGACGCCACTGTTGGTTCGCCATGTCGGAGCGGTGGAGTGCCGTCCAGGACATGGGGGCCGAGAGCCTGGTGGCCCTGCTGGAGAGCGGCATGGACAGAGTGCTCCTCATCGACAGCCGTCCCTTTGTGGAGTACAACACCTCCCACATCCTGGAGGCCATCAACATCAACTCCTCCAAGCTCATGAAGAGGAGACTGCAGCAAGACAAAGTGCTCATAACGGAGCTCATTCAGCACTCGGCCAAGAAGAAGCTGGAGGTGGACAGCAGTCAGGAGGTTGTGGTGTATGACCAGAGCTCAGCCGACGTGGCATCTCTCTCCTCTGAAGCCTTCCTCACAGTGCTCTTGACCAAACTGGAGAAGAGCTTCCGCTGTGTGCACCTCCTCACAGGTGGTTTTGCCGAGTTCTCTCATGACTTCCCTGGCCTGTGTGAGGGGAAGTCTACTCTGGTCCCCTCCTGCATCTCCCAGCCCTGCCTTCCTGTCACCAACGTGGGGCCGACGCGCATCCTCCCACACCTGTACCTCGGCTGCCAGAGAGATGTGCTCAACAAGGATCTGATGCAGCAGAATGATATCGCCTATGTCCTCAATGCCAGTAACACCTGTCCAAAGCCCGATTTCATCCCGGAGTCCCACTTTCTCAGAGTGCCAGTGAATGACAGCTTCTGTGAGAAGATCTTGCCCTGGCTGGACAAGTCAGTGGAGTTTATAGAGAAAGCGAAAGCATCGAATGCGCGGGTTTTGGTCCACTGCTTGGCTGGAATTTCAAGATCTGCCACGATTGCTATAGCGTATATCATGAAGAGAATGGACATGTCTCTGGATGAAGCTTACAGgtttgtgaaggaaaaaagaCCCACCATTTCCCCCAACTTCAATTTCCTCGGGCAGCTTTTGGATTTTGAGAAGAAGATCAAGACCCCGATGGGACCCATGGGCACCATTGCCAAGCTGAAGTTGCTGCACTTGGACAAGGTTGGAGAAGCCCTCTCAGGACAGGAGTCTGGGGACAGCTGCACGAGTGCCGGAGCCCCACTGAGCTGCGCCTTATCGGCCGAGAGTGTGGACCAGGGCCTGAAAGACGCCCTGACGCTGCCCTGCTCACTCGTTGACTCCCTGGGTCTGAGCAGCACAGAGGAGCGGCTGCTGGCCCAAGGGCTGAATGGCCTGCATCTGTGCACGGAGCACGTGGAGGACAGCAGCAAGCTGAAGCGTTCCTTTTCCCTCGATATCAAGTCGTACGGGGCCAGTGGCACTGGGACTTTGCATGCTTTCGCTCCACCAGAAGAGAACATAGAATACTACAAACCGTCTGCCTTCATGGAGGCCAGCAAACCATGCCAGTTCTCCCCTGTAGAGGAAGTGTCAGAACAGACAACACCAGAGAGGAGTCCTGACACAGAGCAGGCCGACACGGTCAACCaaatcagcagcagcaacagcagcagcacccgGCAGGCTAGTATGTCCAAGCCTCCGCCCAGGTCACACCTTCACCCTCTGCACAGAAGTGGCAGCGTGGACGACAACCGCAAAGCCACCAACTTCCTGTTTGGCCTGTCCAGTAGCCAGCAGCACCTGGCTAAGCCTGGCGCCGGGGTGGCACTGAAGGGCTGGCACTCGGACATCCTGGCTCCTGTCACCGCCTCCTCCCTGGCCAACAGCTGGTACTTTTCTCCCGAAGTCTCACGCTTCTACTCCACCTCTGCCATCTTTGCCGGGGGAGGGGGGTCCGGATATTCGGCCTACAGCTGTGGGCAACTGCCCAGCTTCGAGCAGATGGGCTGCGTGCGGCGGCGGCAGAAGAACGGCGACCGGGGCGACTCGCGGCGCAGCTGGCACGAGGAGAGTTCCTTCGAGAAGCAGTTCAAGCGCCGGAGCTGCCAGATGGAGTTCGAGGAGGGCATGTGCGAGAGCCGCTCCAGGGAGGAGCTAGGGAAGGTGGGCAGCCAGTCCAGCTTCTCTGGCAGCATGGAGATCATTGAGGTGTCCTGAGGGTCTGGCAGCCGGGGGAGCGGGGCTGCTGCTCTGCACCGCCGGGGCAGGCGAGTGAAGGAGGGCGAGTGAAGGTCACCCTCTGGTGTTTCTGGTggtgtgaaatgtgtgttttgaggcATCgtgaaaatcaaatacaactACTTTTTAATCCAAATCCGATTCTCTCATTCACATTTTATGGAGAAGCTATAggtctcatttaaaaaataaaaataaaataaaaatctgttaataaaaaaattacagctGATTGCTCTAAAACGATGTCCCACTGAAGTCCAATTTCTTATTTATACgagtatatagtgtgtatgtgtgtcatatatatatatatatatatatatacacacacacacacacacacacacacagtgctctCAATAGGTAATTATTGTAACTCAGTACAGCTGTATGTGTTGTCCAGTACATTGGAGCACATGTCCAGACACTATCTGCTTACAAATTTGACTGGcagtttttgttaaatgttttttaagcattttttccacatttttacTAAAGATTGAGCcgttacagtttttgttttctgtttgcgtgtatatatattttttcttctacctTAAGTTTGTTCTAATTTTTGGCAACCTTGAATGACAATGGTGCGTCACAGATCCATACCAATACACAGAGCCTGATCCGAAGCACAATTTAGGACGTGATGATAAATTGTGTGAGCGTTGGTATTGAGTTTCTACCACATTTGTAAACTTGCTTGCCAAGGTTGCTCAAAATCGAAACAGTACCTCACAGGAGTCAAATTAAGgggctttttaaaaacattgatctTTTGGATGTTTGTAGCTTGTTGACAACTCAAATCTCAGGTCTTATAGTGAGCAGCGGGAAGAACTAATCGCAGACACCTCTTCGAATGAAAACTGTTGTGGATTTTGTATGGCATGATTGATAAGGGATCGCAGTGGTAAAGGGCTCCTACAGAGAGTGAAAAGTAAGTCATCTGGATGTGTTGAGGCTGCTGACTGACGGGCTTTAGTAAGTGATTTGCAAGAGAAAGAGGCCGGGACTCTCTCAGGCATTGCAGCGCCACCAAGCACATCTGATTCACAGCGTTTCTACAGACAAAGGCATACAGACATCAAACCTCATCCTATACTCATCTATACTAGACAGACTCGAGTTAATTGGGTTATTCAGCATTCACAGGGTTTGGTCTCCTGTACCTTGTAATATTGCACTATTAtcacttaaagaaaaataatggatTATTTCTTTCAGAGTATGTGAACAGCCAAGGTCTGGCTTTAGAAAGAGGAAAGCAACCGCACTGTGCAGCACGTGGTCAGCTTCAGGGGTTCAGGCACAAAAAAAGTGTGCCACAGGACTGACAAAATGAAGTCATCATTGGCGGGAATGCGGCTCAGTACTTGATGAGCTAATGAGCTTGAAAACAAAAGTAGGGATTTTGCTTCAGCGTTTTTCAAGATTCATGGTCTCTGGTCATACGATGGTATACAGAATCAACATCTACAGAAAGTCAGGTCTGATCAATATGGGGCCAGAGTATGAATGCATGTTGCCTGATCCATGGTCAAGCAATGTTGTCCATCGTCGAACGGTCTCTGATGCCCGTGTCTCAGACTGTCAGGGCACTGTTTCATTGGCTGACTGCACCAGGTAGCCTTTCATGGGTGCATCTGGGACTAAGAAGTGTTTGCTGCCCCTTCTCGTGGTTTCATATACAAGAAAAGGGCAACATCTTCAACTGGTTTCTTACCAATTCTTTTGAGGTTTATAGTTTGACATTTGGTTTCtctggtgatttttttttctttgagtaTAAATGGCAGAATGATAGTTACCTTCAGTTGCCTTTCTAAACCAACTctgcacatttcaaatgttcaaaCTGCAAAAATCCCCTACGAAGCTACGTGCAAGATGATGGTATTTGGAACCATCCCGCTCTGAGCACATGCGTGTTTTGATGCACGACCGAGGTCTCCCGTGCACACTATCTGGAAGgactggtttaatttaaaatccactCCAGATAAAAATTACAAGTGATAAACAGTGCATCTAAACAGTTCTGCATTTCAGCTGATGCAGATGTGAATTGCAGATGGAAAAAACAGGGAAGTATTTGGATCTCCTTCAGAAAAATTAATGCCAAATCTGCACAGTGTTACTGCTGCGTAACAAAGCACTGAAAGCGGCTGAAGTTGGCATGTTCtttaacacacatacacgcCAGTTGTGATTATTTTATCGCAGCATTATAAACTCTTTTCCACCTGTCCGAGGTGAGGAGTGAGTGTCTGATGACGCCATCTTGGTCAGTTCTCAGTAATGGCAAGGAGCGAATGGTCACCCTTGTCTCCTTGCCGAGTCCTGCTGTCCCAGACAAGATGCACACGTCTGCTGAGAAGGGGTGTGAATCCGTGATGTTCCAGACCTGCAGCCAGTCTGGAACACCAAGTCATGTGCCGGTGAAGGAGGAAATCTTCAAGTAGATTCATCACGTTCTGTGTTTGACTTGGTGTTCAAGGTCACATAGGAAATGGATGTGTAACGTTAATTCAGGTAAATGTTTTTACTTCAAAGAGATtgctttctgcatttgttttgttcatgtatGATTACACCTTGGTTGTACATGTTGTTTAATCACCTGATTTCAGTGTAGGAACCCAGAGGTTTTGTGCTCTGGTCTAATGGGGGGTCATTTTGCTTATTGTCTCCATCCAGAAGAAGCCATAAAGTGATGTGAAGACCACAGTGTACTTTACCATAGAATCTACCATGGAATGAACCTGAATAAgagtggaataaaaaaaaaaaaaaaaagatatcccATAGGTATAATCCAGTGAGATAATACAGTGCCAAATATGTCCATTCCTTTTCCTGGGGCAAGTGTTTTCTGGAAATTGATTTTTGGCCTTGGGTTTCCCCAAATTACCTTTTTGTTACTTCAGTGAGCATCGCCACACTCAGTTCTGCGCGCAAAGAGGGGGGCGGCAGGACAGACCTGAGGGCTAGCCAGATTGCTCAGGTGGCGTTGCCAATCCTATGCAACGCAGTTGACGTTGAGTGCAGTTTTTCCAAAAAACCAGGACAAGTTTTGACCTAGCAAGTCAGCAAATTTAGTTTGTTTGATATACAGAtgaaatatatagatatgtgATTTAAGCATTAGGTTACTTTAAGAACAAATGTAAGTATTTCAGATTTGTTATAATCTCAACAGTTgctataaaggaaaaaaaataaaatgtattctttataaagccttactgtttttttttggtgttcaAAATTcattatatgattatattatatataactatatttcCGGGCTGAAAGatattctattttgtatttaatgtatatccGAAATTCCCAAAATTCAGAATATTGAAAACCTGGAATAACTTTTCCATTGCCAGAGAGCACTGGCCCCAGGTAGCGCAGGTGACTATGGATTTGGGTGTTCTGCATTGCAGGATTCTCATGGGTGACAATAACTGTagtgggtaaaaaaaaaatctagattaTTTGCAAAAAAGTGCCTTGATCTCAGCCCTTTATATAAGTAACTGATCCACAATTATACAgatcagtaaataataaataaacacgaTGTTCACAGATTACATGTAAAACCAAAAGCTTGCAGCggcataatttatattaaattgtagTTTCTGAAACCTCTATGCTAAATAGCACAAACTGAAGGCTGGGGCCTGGAATGGGCCACAATATATACTTTCATTATCTTTAATCATTAAACAGACAAAGTCAGTGATCCCACAGACGGAGTGCTGACTGCACTGCCTTCAACACCGGATCATCCAAGGCATAATTTACGATTGATTCAGACTAATACTTGTTGGTAATAGTTTTACTTTAAAAGGTTTCTCAAACTAATTTGACACCTTTTGGGGTGATAGGGACAATAATCTCATACAGATTGGAGTTAAAAGACTCATTGGAACCAGAGAAAGAGTTCCGCAATCCCTGGGAACATCATAATGAATCATGAGTATGGGATATTGCAGATAGGTTTACACTGTGAGAAAATGCAAGGATTTCATCTGTGCCTTCAATTATGAATTTTACTCAATGACTTCTTTAATTCAGTATGAAGACCGCTTTCAATATTTTCACATTCAGGcccatattcaaattaaatcatcaCCTCTTTTGTGTTCGATGCTAAAGTATCCCAGACCCCAAGAGTTATGTAATGTCCTTGAATTTTGGAGCTTGCGATCTCACTGAAAAGTAGAGCTAGAttattgccttttttattttttagtctCAGATTTCTGCTTGGCCCTTGACTTCCTTGATTTTTGAGCATTTTCGGTTTCTATTTGCTAATCAGACGAGAGCTTAGCACATTTCCTTCTGCTCAGGTGAcccttgatttattttatttcttttggtgtttatttttcGGCCTGCTGTGAAGAGGTCGGTTATTCTTGTGCTGATAGGAATGGTCAAGCTCAGATTCCACTTGTGAACGAATAAGCGGTAGTCTGTACACCGTGTTTAGGCTACTTTGATCAAAGAAAAGAAGTAGACGATGGTACTGTACCACAGTCAAGTTTTCAAGGCCACTTCGTCATCATTTTCTTTACCATGTGTGGGTCTTCATGTTAAGAATAATGTGATTATAATATCTAATTCTAATATTATGTACAATATCTTTTGAGGGTGATATGTATCATGTCCATATACGTGATTATATATGAAAGATCACTTTCATACATTCTATGGACTGTCtcttgaatgaataaatgaatatatatatatatatttcacaactAGGTCCATATTCTGTCTACAGTATGTACACacgtatgtatatgtgtgtatgtgtgtgtatatatatatatatatatatata

Function

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function

KEGG:

id description
K04459 DUSP, MKP; dual specificity MAP kinase phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006616 True 7813 mRNA 0.44 7 12031655 12054027

Neighbor

gene id symbol gene type direction distance location
AMCG00006620 NA coding upstream 17334 12013086 ~ 12014321 (+)
AMCG00006617 tbk1 coding upstream 30736 11987460 ~ 12000919 (+)
AMCG00006614 ptpro coding upstream 129609 11883937 ~ 11902046 (+)
AMCG00006608 syn3 coding upstream 241476 11773986 ~ 11790179 (+)
AMCG00006609 syn3,LOC106576044 coding upstream 296024 11734683 ~ 11735631 (+)
AMCG00006629 NA coding downstream 272808 12326835 ~ 12328153 (+)
AMCG00006630 LOC104940688,LOC102079147,LOC106573136,LOC104946814 coding downstream 278307 12332334 ~ 12333254 (+)
AMCG00006623 xpot,LOC102775766 coding downstream 302026 12356053 ~ 12374775 (+)
AMCG00006631 NA coding downstream 327300 12381327 ~ 12387504 (+)
AMCG00006632 kiaa0930,zgc:172139,LOC107562136,LOC107687566,LOC107719873,LOC107699202 coding downstream 371179 12425206 ~ 12431044 (+)
G111008 crebl2,crbl2 non-coding upstream 7106 12022810 ~ 12024549 (+)
G110930 NA non-coding upstream 238120 11793168 ~ 11793535 (+)
G110916 NA non-coding upstream 359207 11671569 ~ 11672448 (+)
G110883 NA non-coding upstream 681538 11349884 ~ 11350117 (+)
G110849 NA non-coding upstream 910920 11120390 ~ 11120735 (+)
G111063 NA non-coding downstream 296730 12350757 ~ 12353363 (+)
G111148 NA non-coding downstream 705544 12759571 ~ 12770925 (+)
G111161 NA non-coding downstream 791896 12845923 ~ 12847502 (+)
G111240 NA non-coding downstream 1299929 13353956 ~ 13357071 (+)
G111272 hmga2 non-coding downstream 1404012 13458039 ~ 13502571 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 2463379 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 3307589 8710750 ~ 8724066 (+)
G110445 NA other upstream 3854869 8175760 ~ 8176786 (+)
G110279 NA other upstream 4376461 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 5119401 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 91718 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 566035 12620062 ~ 12651815 (+)
G111197 NA other downstream 957157 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 1879639 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 8883470 20937497 ~ 20944977 (+)

Expression


Co-expression Network